Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Gm22786-201ENSMUST00000104086 122 ntBASIC0.55□□□□□ -2.32
Herpud1Q9JJK5 Gm23990-201ENSMUST00000117031 117 ntBASIC0.55□□□□□ -2.32
Herpud1Q9JJK5 Gm24747-201ENSMUST00000157835 87 ntBASIC0.55□□□□□ -2.32
Herpud1Q9JJK5 Mir6364-201ENSMUST00000183396 86 ntBASIC0.55□□□□□ -2.32
Herpud1Q9JJK5 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Herpud1Q9JJK5 Mir3969-201ENSMUST00000197106 92 ntBASIC0.55□□□□□ -2.32
Herpud1Q9JJK5 Mir216a-201ENSMUST00000083605 72 ntBASIC0.55□□□□□ -2.32
Herpud1Q9JJK5 Gm25378-201ENSMUST00000104333 129 ntBASIC0.54□□□□□ -2.32
Herpud1Q9JJK5 Gm22105-201ENSMUST00000116734 116 ntBASIC0.54□□□□□ -2.32
Herpud1Q9JJK5 Gm14946-201ENSMUST00000119859 296 ntBASIC0.54□□□□□ -2.32
Herpud1Q9JJK5 Gm24549-201ENSMUST00000158647 139 ntBASIC0.54□□□□□ -2.32
Herpud1Q9JJK5 Mir3109-201ENSMUST00000175301 88 ntBASIC0.54□□□□□ -2.32
Herpud1Q9JJK5 Gm27792-201ENSMUST00000184031 115 ntBASIC0.54□□□□□ -2.32
Herpud1Q9JJK5 Mir6390-201ENSMUST00000184405 129 ntBASIC0.54□□□□□ -2.32
Herpud1Q9JJK5 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.54□□□□□ -2.32
Herpud1Q9JJK5 Mir30f-201ENSMUST00000196073 92 ntBASIC0.54□□□□□ -2.32
Herpud1Q9JJK5 Gm43944-201ENSMUST00000205220 120 ntBASIC0.54□□□□□ -2.32
Herpud1Q9JJK5 Snord60-201ENSMUST00000082834 78 ntBASIC0.54□□□□□ -2.32
Herpud1Q9JJK5 Gm25138-201ENSMUST00000083248 136 ntBASIC0.54□□□□□ -2.32
Herpud1Q9JJK5 Gm24030-201ENSMUST00000083931 164 ntBASIC0.54□□□□□ -2.32
Herpud1Q9JJK5 Gm24054-201ENSMUST00000158619 105 ntBASIC0.53□□□□□ -2.32
Herpud1Q9JJK5 Gm22139-201ENSMUST00000158747 105 ntBASIC0.53□□□□□ -2.32
Herpud1Q9JJK5 Gm36956-201ENSMUST00000193830 214 ntBASIC0.53□□□□□ -2.32
Herpud1Q9JJK5 Mir7657-201ENSMUST00000196051 57 ntBASIC0.53□□□□□ -2.32
Herpud1Q9JJK5 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.53□□□□□ -2.32
Herpud1Q9JJK5 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.53□□□□□ -2.32
Herpud1Q9JJK5 Mir20b-201ENSMUST00000102087 80 ntBASIC0.52□□□□□ -2.33
Herpud1Q9JJK5 Scarna9-201ENSMUST00000104318 70 ntBASIC0.52□□□□□ -2.33
Herpud1Q9JJK5 Snord71-201ENSMUST00000104361 85 ntBASIC0.52□□□□□ -2.33
Herpud1Q9JJK5 Gm23320-201ENSMUST00000104462 127 ntBASIC0.52□□□□□ -2.33
Herpud1Q9JJK5 Snord90-201ENSMUST00000104568 111 ntBASIC0.52□□□□□ -2.33
Herpud1Q9JJK5 Gm22373-201ENSMUST00000104584 89 ntBASIC0.52□□□□□ -2.33
Herpud1Q9JJK5 Gm6985-201ENSMUST00000121255 271 ntBASIC0.52□□□□□ -2.33
Herpud1Q9JJK5 Mir1899-201ENSMUST00000122798 96 ntBASIC0.52□□□□□ -2.33
Herpud1Q9JJK5 Gm27993-201ENSMUST00000184362 85 ntBASIC0.52□□□□□ -2.33
Herpud1Q9JJK5 Gm37545-201ENSMUST00000186512 148 ntBASIC0.52□□□□□ -2.33
Herpud1Q9JJK5 Gm37330-201ENSMUST00000192606 153 ntBASIC0.52□□□□□ -2.33
Herpud1Q9JJK5 Gm44211-201ENSMUST00000204867 145 ntBASIC0.52□□□□□ -2.33
Herpud1Q9JJK5 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Herpud1Q9JJK5 Gm15289-201ENSMUST00000117793 244 ntBASIC0.51□□□□□ -2.33
Herpud1Q9JJK5 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.51□□□□□ -2.33
Herpud1Q9JJK5 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.51□□□□□ -2.33
Herpud1Q9JJK5 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.51□□□□□ -2.33
Herpud1Q9JJK5 Gm23303-201ENSMUST00000082714 152 ntBASIC0.51□□□□□ -2.33
Herpud1Q9JJK5 Gm25401-201ENSMUST00000082975 106 ntBASIC0.51□□□□□ -2.33
Herpud1Q9JJK5 Gm25136-201ENSMUST00000083253 115 ntBASIC0.51□□□□□ -2.33
Herpud1Q9JJK5 Gm22753-201ENSMUST00000083657 107 ntBASIC0.51□□□□□ -2.33
Herpud1Q9JJK5 Gm10172-201ENSMUST00000085929 558 ntBASIC0.51□□□□□ -2.33
Herpud1Q9JJK5 Gm23989-201ENSMUST00000117030 66 ntBASIC0.5□□□□□ -2.33
Herpud1Q9JJK5 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.5□□□□□ -2.33
Herpud1Q9JJK5 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.5□□□□□ -2.33
Herpud1Q9JJK5 Gm23340-201ENSMUST00000158955 123 ntBASIC0.5□□□□□ -2.33
Herpud1Q9JJK5 Gm22699-201ENSMUST00000175376 105 ntBASIC0.5□□□□□ -2.33
Herpud1Q9JJK5 Gm24106-201ENSMUST00000175498 127 ntBASIC0.5□□□□□ -2.33
Herpud1Q9JJK5 Gm27289-201ENSMUST00000183341 82 ntBASIC0.5□□□□□ -2.33
Herpud1Q9JJK5 Gm44489-201ENSMUST00000104619 97 ntBASIC0.49□□□□□ -2.33
Herpud1Q9JJK5 Gm23881-201ENSMUST00000116872 66 ntBASIC0.49□□□□□ -2.33
Herpud1Q9JJK5 Gm11644-201ENSMUST00000119735 150 ntBASIC0.49□□□□□ -2.33
Herpud1Q9JJK5 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.49□□□□□ -2.33
Herpud1Q9JJK5 Gm16265-201ENSMUST00000134558 108 ntBASIC0.49□□□□□ -2.33
Herpud1Q9JJK5 Gm25901-201ENSMUST00000158494 130 ntBASIC0.49□□□□□ -2.33
Herpud1Q9JJK5 Gm23416-201ENSMUST00000175520 95 ntBASIC0.49□□□□□ -2.33
Herpud1Q9JJK5 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.49□□□□□ -2.33
Herpud1Q9JJK5 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.49□□□□□ -2.33
Herpud1Q9JJK5 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Herpud1Q9JJK5 Snord72-201ENSMUST00000104549 81 ntBASIC0.48□□□□□ -2.33
Herpud1Q9JJK5 Gm25329-201ENSMUST00000158041 126 ntBASIC0.48□□□□□ -2.33
Herpud1Q9JJK5 Gm23504-201ENSMUST00000158988 95 ntBASIC0.48□□□□□ -2.33
Herpud1Q9JJK5 Mir3094-201ENSMUST00000175121 64 ntBASIC0.48□□□□□ -2.33
Herpud1Q9JJK5 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.48□□□□□ -2.33
Herpud1Q9JJK5 Gm24575-201ENSMUST00000175502 77 ntBASIC0.48□□□□□ -2.33
Herpud1Q9JJK5 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Herpud1Q9JJK5 Mir6389-201ENSMUST00000183661 102 ntBASIC0.48□□□□□ -2.33
Herpud1Q9JJK5 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.48□□□□□ -2.33
Herpud1Q9JJK5 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.48□□□□□ -2.33
Herpud1Q9JJK5 Gm25797-201ENSMUST00000082640 107 ntBASIC0.48□□□□□ -2.33
Herpud1Q9JJK5 Gm23301-201ENSMUST00000082713 65 ntBASIC0.48□□□□□ -2.33
Herpud1Q9JJK5 Gm23947-201ENSMUST00000093636 107 ntBASIC0.48□□□□□ -2.33
Herpud1Q9JJK5 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
Herpud1Q9JJK5 Gm22673-201ENSMUST00000104415 131 ntBASIC0.47□□□□□ -2.33
Herpud1Q9JJK5 Gm24500-201ENSMUST00000158447 124 ntBASIC0.47□□□□□ -2.33
Herpud1Q9JJK5 Gm25976-201ENSMUST00000158695 130 ntBASIC0.47□□□□□ -2.33
Herpud1Q9JJK5 Gm10548-202ENSMUST00000165672 272 ntBASIC0.47□□□□□ -2.33
Herpud1Q9JJK5 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.47□□□□□ -2.33
Herpud1Q9JJK5 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.47□□□□□ -2.33
Herpud1Q9JJK5 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.47□□□□□ -2.33
Herpud1Q9JJK5 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.47□□□□□ -2.33
Herpud1Q9JJK5 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.47□□□□□ -2.33
Herpud1Q9JJK5 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.47□□□□□ -2.33
Herpud1Q9JJK5 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.47□□□□□ -2.33
Herpud1Q9JJK5 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.47□□□□□ -2.33
Herpud1Q9JJK5 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.47□□□□□ -2.33
Herpud1Q9JJK5 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.47□□□□□ -2.33
Herpud1Q9JJK5 Gm44469-201ENSMUST00000198558 79 ntBASIC0.47□□□□□ -2.33
Herpud1Q9JJK5 Gm42935-201ENSMUST00000202004 151 ntBASIC0.47□□□□□ -2.33
Herpud1Q9JJK5 Gm23445-201ENSMUST00000082800 107 ntBASIC0.47□□□□□ -2.33
Herpud1Q9JJK5 Gm23509-201ENSMUST00000083080 160 ntBASIC0.47□□□□□ -2.33
Herpud1Q9JJK5 Gm25300-201ENSMUST00000175284 84 ntBASIC0.46□□□□□ -2.34
Herpud1Q9JJK5 Gm26236-201ENSMUST00000175536 137 ntBASIC0.46□□□□□ -2.34
Herpud1Q9JJK5 Gm22565-201ENSMUST00000175540 69 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms