Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC-3.24□□□□□ -2.93
Smco4Q9JIS3 Mir369-201ENSMUST00000083627 79 ntBASIC-3.24□□□□□ -2.93
Smco4Q9JIS3 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-3.25□□□□□ -2.93
Smco4Q9JIS3 Gm23901-201ENSMUST00000157570 107 ntBASIC-3.25□□□□□ -2.93
Smco4Q9JIS3 Gm27672-201ENSMUST00000183751 204 ntBASIC-3.25□□□□□ -2.93
Smco4Q9JIS3 Gm43907-201ENSMUST00000203128 117 ntBASIC-3.25□□□□□ -2.93
Smco4Q9JIS3 AC120394.1-201ENSMUST00000217153 351 ntBASIC-3.25□□□□□ -2.93
Smco4Q9JIS3 AC164297.5-201ENSMUST00000224365 198 ntBASIC-3.25□□□□□ -2.93
Smco4Q9JIS3 AC167192.2-201ENSMUST00000224794 198 ntBASIC-3.25□□□□□ -2.93
Smco4Q9JIS3 AC156790.3-201ENSMUST00000226200 254 ntBASIC-3.25□□□□□ -2.93
Smco4Q9JIS3 Gm13720-201ENSMUST00000120741 196 ntBASIC-3.26□□□□□ -2.93
Smco4Q9JIS3 Gm24960-201ENSMUST00000157923 90 ntBASIC-3.26□□□□□ -2.93
Smco4Q9JIS3 Gm24577-201ENSMUST00000158580 63 ntBASIC-3.26□□□□□ -2.93
Smco4Q9JIS3 Mir6957-201ENSMUST00000183708 64 ntBASIC-3.26□□□□□ -2.93
Smco4Q9JIS3 Mir7657-201ENSMUST00000196051 57 ntBASIC-3.26□□□□□ -2.93
Smco4Q9JIS3 Gm25329-201ENSMUST00000158041 126 ntBASIC-3.27□□□□□ -2.93
Smco4Q9JIS3 Mir451b-201ENSMUST00000196157 72 ntBASIC-3.27□□□□□ -2.93
Smco4Q9JIS3 Gm18242-201ENSMUST00000218455 542 ntBASIC-3.27□□□□□ -2.93
Smco4Q9JIS3 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-3.27□□□□□ -2.93
Smco4Q9JIS3 Gm24612-201ENSMUST00000083267 107 ntBASIC-3.27□□□□□ -2.93
Smco4Q9JIS3 Gm24064-201ENSMUST00000157486 106 ntBASIC-3.28□□□□□ -2.93
Smco4Q9JIS3 Gm25626-201ENSMUST00000177631 107 ntBASIC-3.28□□□□□ -2.93
Smco4Q9JIS3 Gm28330-201ENSMUST00000190353 171 ntBASIC-3.28□□□□□ -2.93
Smco4Q9JIS3 Gm28926-201ENSMUST00000191063 680 ntBASIC-3.28□□□□□ -2.93
Smco4Q9JIS3 Gm22572-201ENSMUST00000082985 105 ntBASIC-3.28□□□□□ -2.93
Smco4Q9JIS3 Gm22294-201ENSMUST00000083308 104 ntBASIC-3.28□□□□□ -2.93
Smco4Q9JIS3 Gm24340-201ENSMUST00000104208 97 ntBASIC-3.29□□□□□ -2.94
Smco4Q9JIS3 Gm25828-201ENSMUST00000157087 95 ntBASIC-3.29□□□□□ -2.94
Smco4Q9JIS3 Gm22638-201ENSMUST00000179674 107 ntBASIC-3.29□□□□□ -2.94
Smco4Q9JIS3 Gm29512-201ENSMUST00000185544 315 ntBASIC-3.29□□□□□ -2.94
Smco4Q9JIS3 Gm23571-201ENSMUST00000180073 127 ntBASIC-3.3□□□□□ -2.94
Smco4Q9JIS3 Gm26456-201ENSMUST00000082831 111 ntBASIC-3.3□□□□□ -2.94
Smco4Q9JIS3 Snord123-201ENSMUST00000158692 71 ntBASIC-3.31□□□□□ -2.94
Smco4Q9JIS3 Gm38333-201ENSMUST00000193608 604 ntBASIC-3.31□□□□□ -2.94
Smco4Q9JIS3 AC132615.1-201ENSMUST00000213873 255 ntBASIC-3.31□□□□□ -2.94
Smco4Q9JIS3 Gm13345-201ENSMUST00000121928 228 ntBASIC-3.32□□□□□ -2.94
Smco4Q9JIS3 Gm23411-201ENSMUST00000157988 62 ntBASIC-3.32□□□□□ -2.94
Smco4Q9JIS3 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC-3.32□□□□□ -2.94
Smco4Q9JIS3 Gm24238-201ENSMUST00000157792 98 ntBASIC-3.33□□□□□ -2.94
Smco4Q9JIS3 Gm25915-201ENSMUST00000104265 126 ntBASIC-3.34□□□□□ -2.94
Smco4Q9JIS3 Gm11694-201ENSMUST00000118637 159 ntBASIC-3.34□□□□□ -2.94
Smco4Q9JIS3 Gm23900-201ENSMUST00000157569 108 ntBASIC-3.34□□□□□ -2.94
Smco4Q9JIS3 Gm13801-201ENSMUST00000120750 160 ntBASIC-3.35□□□□□ -2.95
Smco4Q9JIS3 Gm23022-201ENSMUST00000158768 180 ntBASIC-3.35□□□□□ -2.95
Smco4Q9JIS3 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-3.35□□□□□ -2.95
Smco4Q9JIS3 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-3.35□□□□□ -2.95
Smco4Q9JIS3 Mir7218-201ENSMUST00000200050 59 ntBASIC-3.35□□□□□ -2.95
Smco4Q9JIS3 Gm23536-201ENSMUST00000157541 134 ntBASIC-3.36□□□□□ -2.95
Smco4Q9JIS3 Gm22385-201ENSMUST00000158189 101 ntBASIC-3.36□□□□□ -2.95
Smco4Q9JIS3 Mir1839-201ENSMUST00000175366 127 ntBASIC-3.36□□□□□ -2.95
Smco4Q9JIS3 AC132833.2-201ENSMUST00000228699 157 ntBASIC-3.36□□□□□ -2.95
Smco4Q9JIS3 Gm14533-201ENSMUST00000117088 93 ntBASIC-3.37□□□□□ -2.95
Smco4Q9JIS3 Gm22339-201ENSMUST00000157718 62 ntBASIC-3.37□□□□□ -2.95
Smco4Q9JIS3 Gm26398-201ENSMUST00000179015 127 ntBASIC-3.37□□□□□ -2.95
Smco4Q9JIS3 Gm22305-201ENSMUST00000082690 108 ntBASIC-3.37□□□□□ -2.95
Smco4Q9JIS3 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-3.38□□□□□ -2.95
Smco4Q9JIS3 Snord98-201ENSMUST00000116819 65 ntBASIC-3.39□□□□□ -2.95
Smco4Q9JIS3 Gm25769-201ENSMUST00000158569 127 ntBASIC-3.4□□□□□ -2.95
Smco4Q9JIS3 Gm24037-201ENSMUST00000082871 180 ntBASIC-3.4□□□□□ -2.95
Smco4Q9JIS3 Gm25664-201ENSMUST00000157697 107 ntBASIC-3.41□□□□□ -2.96
Smco4Q9JIS3 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-3.42□□□□□ -2.96
Smco4Q9JIS3 Gm26271-201ENSMUST00000158349 104 ntBASIC-3.42□□□□□ -2.96
Smco4Q9JIS3 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC-3.42□□□□□ -2.96
Smco4Q9JIS3 Gm25848-201ENSMUST00000116790 144 ntBASIC-3.43□□□□□ -2.96
Smco4Q9JIS3 Gm23477-201ENSMUST00000158882 128 ntBASIC-3.43□□□□□ -2.96
Smco4Q9JIS3 Gm25235-201ENSMUST00000179933 107 ntBASIC-3.43□□□□□ -2.96
Smco4Q9JIS3 Gm26262-201ENSMUST00000158024 127 ntBASIC-3.44□□□□□ -2.96
Smco4Q9JIS3 Gm20462-201ENSMUST00000172623 408 ntBASIC-3.44□□□□□ -2.96
Smco4Q9JIS3 Gm42935-201ENSMUST00000202004 151 ntBASIC-3.44□□□□□ -2.96
Smco4Q9JIS3 Gm23845-201ENSMUST00000083834 152 ntBASIC-3.44□□□□□ -2.96
Smco4Q9JIS3 Mir702-201ENSMUST00000102285 109 ntBASIC-3.45□□□□□ -2.96
Smco4Q9JIS3 Gm26478-201ENSMUST00000122611 133 ntBASIC-3.45□□□□□ -2.96
Smco4Q9JIS3 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC-3.45□□□□□ -2.96
Smco4Q9JIS3 Gm38261-201ENSMUST00000192608 316 ntBASIC-3.45□□□□□ -2.96
Smco4Q9JIS3 Gm24856-201ENSMUST00000082809 107 ntBASIC-3.45□□□□□ -2.96
Smco4Q9JIS3 Gm25417-201ENSMUST00000104212 131 ntBASIC-3.46□□□□□ -2.96
Smco4Q9JIS3 AC124687.1-201ENSMUST00000221868 189 ntBASIC-3.46□□□□□ -2.96
Smco4Q9JIS3 Gm25991-201ENSMUST00000102439 99 ntBASIC-3.48□□□□□ -2.97
Smco4Q9JIS3 Gm38050-201ENSMUST00000191904 238 ntBASIC-3.48□□□□□ -2.97
Smco4Q9JIS3 Gm44142-201ENSMUST00000203358 311 ntBASIC-3.48□□□□□ -2.97
Smco4Q9JIS3 Mir669h-201ENSMUST00000116944 125 ntBASIC-3.49□□□□□ -2.97
Smco4Q9JIS3 Gm23640-201ENSMUST00000157860 104 ntBASIC-3.49□□□□□ -2.97
Smco4Q9JIS3 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-3.49□□□□□ -2.97
Smco4Q9JIS3 Gm5034-201ENSMUST00000199115 634 ntBASIC-3.49□□□□□ -2.97
Smco4Q9JIS3 AC154506.3-201ENSMUST00000225417 213 ntBASIC-3.49□□□□□ -2.97
Smco4Q9JIS3 Gm24453-201ENSMUST00000083346 76 ntBASIC-3.49□□□□□ -2.97
Smco4Q9JIS3 Gm25410-201ENSMUST00000083758 137 ntBASIC-3.49□□□□□ -2.97
Smco4Q9JIS3 Snord38a-201ENSMUST00000083746 71 ntBASIC-3.5□□□□□ -2.97
Smco4Q9JIS3 Gm24913-201ENSMUST00000157286 107 ntBASIC-3.51□□□□□ -2.97
Smco4Q9JIS3 Gm24051-201ENSMUST00000158622 75 ntBASIC-3.51□□□□□ -2.97
Smco4Q9JIS3 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-3.52□□□□□ -2.97
Smco4Q9JIS3 Gm26420-201ENSMUST00000104273 103 ntBASIC-3.52□□□□□ -2.97
Smco4Q9JIS3 Gm24275-201ENSMUST00000116780 146 ntBASIC-3.52□□□□□ -2.97
Smco4Q9JIS3 Gm23291-201ENSMUST00000175611 78 ntBASIC-3.52□□□□□ -2.97
Smco4Q9JIS3 Mir465d-201ENSMUST00000196314 58 ntBASIC-3.53□□□□□ -2.97
Smco4Q9JIS3 Gm22335-201ENSMUST00000157724 99 ntBASIC-3.54□□□□□ -2.98
Smco4Q9JIS3 Gm25653-201ENSMUST00000158473 138 ntBASIC-3.54□□□□□ -2.98
Smco4Q9JIS3 Gm23379-201ENSMUST00000180026 107 ntBASIC-3.54□□□□□ -2.98
Smco4Q9JIS3 Mir6928-201ENSMUST00000185166 70 ntBASIC-3.54□□□□□ -2.98
Smco4Q9JIS3 AC147101.1-201ENSMUST00000217964 312 ntBASIC-3.54□□□□□ -2.98
Retrieved 100 of 76,532 protein–RNA pairs in 196.4 ms