Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm22850-201ENSMUST00000157714 82 ntBASIC0.33□□□□□ -2.36
Scn4aQ9ER60 Gm23080-201ENSMUST00000157846 103 ntBASIC0.33□□□□□ -2.36
Scn4aQ9ER60 Gm37586-201ENSMUST00000193654 204 ntBASIC0.33□□□□□ -2.36
Scn4aQ9ER60 Gm44345-201ENSMUST00000199560 135 ntBASIC0.33□□□□□ -2.36
Scn4aQ9ER60 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC0.33□□□□□ -2.36
Scn4aQ9ER60 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.33□□□□□ -2.36
Scn4aQ9ER60 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Scn4aQ9ER60 Mir186-201ENSMUST00000083497 71 ntBASIC0.33□□□□□ -2.36
Scn4aQ9ER60 Gm22576-201ENSMUST00000083733 104 ntBASIC0.33□□□□□ -2.36
Scn4aQ9ER60 Gm25444-201ENSMUST00000158999 113 ntBASIC0.32□□□□□ -2.36
Scn4aQ9ER60 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.32□□□□□ -2.36
Scn4aQ9ER60 Gm23141-201ENSMUST00000178682 94 ntBASIC0.32□□□□□ -2.36
Scn4aQ9ER60 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.32□□□□□ -2.36
Scn4aQ9ER60 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.32□□□□□ -2.36
Scn4aQ9ER60 Mir721-201ENSMUST00000200230 88 ntBASIC0.31□□□□□ -2.36
Scn4aQ9ER60 Mir377-201ENSMUST00000083504 68 ntBASIC0.31□□□□□ -2.36
Scn4aQ9ER60 Gm22489-201ENSMUST00000116813 62 ntBASIC0.31□□□□□ -2.36
Scn4aQ9ER60 Gm24238-201ENSMUST00000157792 98 ntBASIC0.31□□□□□ -2.36
Scn4aQ9ER60 Gm25364-201ENSMUST00000158851 107 ntBASIC0.31□□□□□ -2.36
Scn4aQ9ER60 Gm16550-201ENSMUST00000162550 126 ntBASIC0.31□□□□□ -2.36
Scn4aQ9ER60 Gm23003-201ENSMUST00000179948 107 ntBASIC0.31□□□□□ -2.36
Scn4aQ9ER60 Gm38019-201ENSMUST00000195133 380 ntBASIC0.31□□□□□ -2.36
Scn4aQ9ER60 Mir200a-201ENSMUST00000083466 90 ntBASIC0.31□□□□□ -2.36
Scn4aQ9ER60 Gm25223-201ENSMUST00000158200 110 ntBASIC0.3□□□□□ -2.36
Scn4aQ9ER60 Gm27446-201ENSMUST00000183963 89 ntBASIC0.3□□□□□ -2.36
Scn4aQ9ER60 Gm28435-201ENSMUST00000185496 108 ntBASIC0.3□□□□□ -2.36
Scn4aQ9ER60 Gm37116-201ENSMUST00000195161 147 ntBASIC0.3□□□□□ -2.36
Scn4aQ9ER60 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.3□□□□□ -2.36
Scn4aQ9ER60 Gm26156-201ENSMUST00000116999 123 ntBASIC0.29□□□□□ -2.36
Scn4aQ9ER60 Gm23989-201ENSMUST00000117030 66 ntBASIC0.29□□□□□ -2.36
Scn4aQ9ER60 Gm22706-201ENSMUST00000157907 112 ntBASIC0.29□□□□□ -2.36
Scn4aQ9ER60 Gm27402-201ENSMUST00000183890 120 ntBASIC0.29□□□□□ -2.36
Scn4aQ9ER60 Mir532-201ENSMUST00000093630 96 ntBASIC0.29□□□□□ -2.36
Scn4aQ9ER60 Gm25611-201ENSMUST00000104017 133 ntBASIC0.29□□□□□ -2.36
Scn4aQ9ER60 Mir6365-201ENSMUST00000183990 101 ntBASIC0.29□□□□□ -2.36
Scn4aQ9ER60 Gm22101-201ENSMUST00000157928 103 ntBASIC0.28□□□□□ -2.36
Scn4aQ9ER60 Gm22942-201ENSMUST00000158563 124 ntBASIC0.28□□□□□ -2.36
Scn4aQ9ER60 Gm27717-201ENSMUST00000183933 151 ntBASIC0.27□□□□□ -2.37
Scn4aQ9ER60 Mir6390-201ENSMUST00000184405 129 ntBASIC0.27□□□□□ -2.37
Scn4aQ9ER60 Gm37889-201ENSMUST00000194174 251 ntBASIC0.27□□□□□ -2.37
Scn4aQ9ER60 Gm25882-201ENSMUST00000157784 85 ntBASIC0.27□□□□□ -2.37
Scn4aQ9ER60 Gm27934-201ENSMUST00000158795 63 ntBASIC0.27□□□□□ -2.37
Scn4aQ9ER60 Gm27735-201ENSMUST00000185085 76 ntBASIC0.27□□□□□ -2.37
Scn4aQ9ER60 Gm26303-201ENSMUST00000116845 119 ntBASIC0.25□□□□□ -2.37
Scn4aQ9ER60 Mir1899-201ENSMUST00000122798 96 ntBASIC0.25□□□□□ -2.37
Scn4aQ9ER60 Gm23857-201ENSMUST00000158379 111 ntBASIC0.25□□□□□ -2.37
Scn4aQ9ER60 Gm20409-201ENSMUST00000173457 130 ntBASIC0.25□□□□□ -2.37
Scn4aQ9ER60 Gm27943-201ENSMUST00000184844 116 ntBASIC0.25□□□□□ -2.37
Scn4aQ9ER60 Mir3969-201ENSMUST00000197106 92 ntBASIC0.25□□□□□ -2.37
Scn4aQ9ER60 Gm23761-201ENSMUST00000158347 104 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm22239-201ENSMUST00000175220 103 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Mir670-201ENSMUST00000102380 100 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm23881-201ENSMUST00000116872 66 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm25248-201ENSMUST00000175473 98 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm23416-201ENSMUST00000175520 95 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm23770-201ENSMUST00000178009 108 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm22832-201ENSMUST00000178022 108 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm23863-201ENSMUST00000178265 108 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm24828-201ENSMUST00000178507 108 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm23052-201ENSMUST00000178633 108 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm25729-201ENSMUST00000179050 108 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm25359-201ENSMUST00000179315 108 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm22624-201ENSMUST00000179913 108 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm23378-201ENSMUST00000082942 107 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm25141-201ENSMUST00000083177 107 ntBASIC0.24□□□□□ -2.37
Scn4aQ9ER60 Gm24296-201ENSMUST00000158297 106 ntBASIC0.23□□□□□ -2.37
Scn4aQ9ER60 Gm24321-201ENSMUST00000175348 80 ntBASIC0.23□□□□□ -2.37
Scn4aQ9ER60 Gm24488-201ENSMUST00000179934 127 ntBASIC0.23□□□□□ -2.37
Scn4aQ9ER60 Gm25701-201ENSMUST00000179988 127 ntBASIC0.23□□□□□ -2.37
Scn4aQ9ER60 Gm26431-201ENSMUST00000180199 127 ntBASIC0.23□□□□□ -2.37
Scn4aQ9ER60 Snord60-201ENSMUST00000082834 78 ntBASIC0.23□□□□□ -2.37
Scn4aQ9ER60 Mir411-201ENSMUST00000083543 82 ntBASIC0.23□□□□□ -2.37
Scn4aQ9ER60 Mir669g-201ENSMUST00000116809 123 ntBASIC0.22□□□□□ -2.37
Scn4aQ9ER60 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.22□□□□□ -2.37
Scn4aQ9ER60 Gm22541-201ENSMUST00000158165 127 ntBASIC0.22□□□□□ -2.37
Scn4aQ9ER60 Snord49b-201ENSMUST00000082503 72 ntBASIC0.22□□□□□ -2.37
Scn4aQ9ER60 Gm22303-201ENSMUST00000082686 122 ntBASIC0.22□□□□□ -2.37
Scn4aQ9ER60 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.22□□□□□ -2.37
Scn4aQ9ER60 Gm12469-201ENSMUST00000117623 207 ntBASIC0.22□□□□□ -2.37
Scn4aQ9ER60 Mir3108-201ENSMUST00000175500 79 ntBASIC0.22□□□□□ -2.37
Scn4aQ9ER60 Mir466b-8-201ENSMUST00000103883 86 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 Gm22790-201ENSMUST00000157229 129 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 Gm10548-202ENSMUST00000165672 272 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 Gm25300-201ENSMUST00000175284 84 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 Gm27475-201ENSMUST00000183420 61 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 Mir7065-201ENSMUST00000185110 61 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 Mir466e-201ENSMUST00000198862 84 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 Mir466c-1-201ENSMUST00000200654 84 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 Gm45002-201ENSMUST00000208045 120 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 AL606472.1-201ENSMUST00000224628 275 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 Snord61-201ENSMUST00000083176 71 ntBASIC0.21□□□□□ -2.38
Scn4aQ9ER60 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.2□□□□□ -2.38
Scn4aQ9ER60 Scarna8-201ENSMUST00000158333 131 ntBASIC0.2□□□□□ -2.38
Scn4aQ9ER60 Gm22946-201ENSMUST00000158558 82 ntBASIC0.2□□□□□ -2.38
Scn4aQ9ER60 Gm23567-201ENSMUST00000178005 107 ntBASIC0.2□□□□□ -2.38
Scn4aQ9ER60 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.2□□□□□ -2.38
Scn4aQ9ER60 Snord95-201ENSMUST00000082846 68 ntBASIC0.2□□□□□ -2.38
Scn4aQ9ER60 Gm22368-201ENSMUST00000102416 109 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 130.5 ms