Protein–RNA interactions for Protein: Q9DAL3

Ccdc54, Coiled-coil domain-containing protein 54, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54Q9DAL3 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.48□□□□□ -2.33
Ccdc54Q9DAL3 Snord60-201ENSMUST00000082834 78 ntBASIC0.48□□□□□ -2.33
Ccdc54Q9DAL3 Gm24527-201ENSMUST00000082920 107 ntBASIC0.48□□□□□ -2.33
Ccdc54Q9DAL3 Gm22753-201ENSMUST00000083657 107 ntBASIC0.48□□□□□ -2.33
Ccdc54Q9DAL3 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
Ccdc54Q9DAL3 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
Ccdc54Q9DAL3 Gm25378-201ENSMUST00000104333 129 ntBASIC0.47□□□□□ -2.33
Ccdc54Q9DAL3 Gm25901-201ENSMUST00000158494 130 ntBASIC0.47□□□□□ -2.33
Ccdc54Q9DAL3 Gm24232-201ENSMUST00000104314 132 ntBASIC0.46□□□□□ -2.34
Ccdc54Q9DAL3 Gm23989-201ENSMUST00000117030 66 ntBASIC0.46□□□□□ -2.34
Ccdc54Q9DAL3 Gm25060-201ENSMUST00000157374 130 ntBASIC0.46□□□□□ -2.34
Ccdc54Q9DAL3 Gm25329-201ENSMUST00000158041 126 ntBASIC0.46□□□□□ -2.34
Ccdc54Q9DAL3 Gm22522-201ENSMUST00000158271 151 ntBASIC0.46□□□□□ -2.34
Ccdc54Q9DAL3 Gm23340-201ENSMUST00000158955 123 ntBASIC0.46□□□□□ -2.34
Ccdc54Q9DAL3 Gm24323-201ENSMUST00000175342 77 ntBASIC0.46□□□□□ -2.34
Ccdc54Q9DAL3 Gm24575-201ENSMUST00000175502 77 ntBASIC0.46□□□□□ -2.34
Ccdc54Q9DAL3 Mir6364-201ENSMUST00000183396 86 ntBASIC0.46□□□□□ -2.34
Ccdc54Q9DAL3 DQ267101-201ENSMUST00000082562 73 ntBASIC0.46□□□□□ -2.34
Ccdc54Q9DAL3 Gm22302-201ENSMUST00000082657 106 ntBASIC0.46□□□□□ -2.34
Ccdc54Q9DAL3 Snord47-201ENSMUST00000083034 77 ntBASIC0.46□□□□□ -2.34
Ccdc54Q9DAL3 Gm44489-201ENSMUST00000104619 97 ntBASIC0.45□□□□□ -2.34
Ccdc54Q9DAL3 Gm23990-201ENSMUST00000117031 117 ntBASIC0.45□□□□□ -2.34
Ccdc54Q9DAL3 Gm23337-201ENSMUST00000158959 118 ntBASIC0.45□□□□□ -2.34
Ccdc54Q9DAL3 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
Ccdc54Q9DAL3 Gm23917-201ENSMUST00000175256 98 ntBASIC0.45□□□□□ -2.34
Ccdc54Q9DAL3 Gm24238-201ENSMUST00000157792 98 ntBASIC0.44□□□□□ -2.34
Ccdc54Q9DAL3 Gm25716-201ENSMUST00000158628 104 ntBASIC0.44□□□□□ -2.34
Ccdc54Q9DAL3 Gm24549-201ENSMUST00000158647 139 ntBASIC0.44□□□□□ -2.34
Ccdc54Q9DAL3 Gm10548-202ENSMUST00000165672 272 ntBASIC0.44□□□□□ -2.34
Ccdc54Q9DAL3 Mir3094-201ENSMUST00000175121 64 ntBASIC0.44□□□□□ -2.34
Ccdc54Q9DAL3 Gm22466-201ENSMUST00000175278 69 ntBASIC0.44□□□□□ -2.34
Ccdc54Q9DAL3 Gm22699-201ENSMUST00000175376 105 ntBASIC0.44□□□□□ -2.34
Ccdc54Q9DAL3 Mir30f-201ENSMUST00000196073 92 ntBASIC0.44□□□□□ -2.34
Ccdc54Q9DAL3 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.44□□□□□ -2.34
Ccdc54Q9DAL3 Gm26225-201ENSMUST00000082508 135 ntBASIC0.44□□□□□ -2.34
Ccdc54Q9DAL3 Gm25797-201ENSMUST00000082640 107 ntBASIC0.44□□□□□ -2.34
Ccdc54Q9DAL3 Gm24920-201ENSMUST00000083018 85 ntBASIC0.44□□□□□ -2.34
Ccdc54Q9DAL3 Gm25943-201ENSMUST00000103791 90 ntBASIC0.43□□□□□ -2.34
Ccdc54Q9DAL3 Mir466b-7-201ENSMUST00000103804 88 ntBASIC0.43□□□□□ -2.34
Ccdc54Q9DAL3 Mir466b-5-201ENSMUST00000103900 88 ntBASIC0.43□□□□□ -2.34
Ccdc54Q9DAL3 Gm22815-201ENSMUST00000157451 62 ntBASIC0.43□□□□□ -2.34
Ccdc54Q9DAL3 Gm25599-201ENSMUST00000157816 103 ntBASIC0.43□□□□□ -2.34
Ccdc54Q9DAL3 Gm23416-201ENSMUST00000175520 95 ntBASIC0.43□□□□□ -2.34
Ccdc54Q9DAL3 Mir466b-4-201ENSMUST00000178801 90 ntBASIC0.43□□□□□ -2.34
Ccdc54Q9DAL3 Gm25285-201ENSMUST00000178951 90 ntBASIC0.43□□□□□ -2.34
Ccdc54Q9DAL3 Mir466b-6-201ENSMUST00000180061 90 ntBASIC0.43□□□□□ -2.34
Ccdc54Q9DAL3 Mir466c-2-201ENSMUST00000180211 90 ntBASIC0.43□□□□□ -2.34
Ccdc54Q9DAL3 Gm27446-201ENSMUST00000183963 89 ntBASIC0.43□□□□□ -2.34
Ccdc54Q9DAL3 Gm18665-201ENSMUST00000189783 270 ntBASIC0.43□□□□□ -2.34
Ccdc54Q9DAL3 Mir3969-201ENSMUST00000197106 92 ntBASIC0.43□□□□□ -2.34
Ccdc54Q9DAL3 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.43□□□□□ -2.34
Ccdc54Q9DAL3 Gm18502-201ENSMUST00000218679 199 ntBASIC0.43□□□□□ -2.34
Ccdc54Q9DAL3 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.43□□□□□ -2.34
Ccdc54Q9DAL3 Mir101a-201ENSMUST00000083517 83 ntBASIC0.43□□□□□ -2.34
Ccdc54Q9DAL3 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.43□□□□□ -2.34
Ccdc54Q9DAL3 Snord71-201ENSMUST00000104361 85 ntBASIC0.42□□□□□ -2.34
Ccdc54Q9DAL3 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.42□□□□□ -2.34
Ccdc54Q9DAL3 Gm24461-201ENSMUST00000082735 103 ntBASIC0.42□□□□□ -2.34
Ccdc54Q9DAL3 Mir30a-201ENSMUST00000083471 71 ntBASIC0.42□□□□□ -2.34
Ccdc54Q9DAL3 Mir377-201ENSMUST00000083504 68 ntBASIC0.42□□□□□ -2.34
Ccdc54Q9DAL3 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Ccdc54Q9DAL3 Gm22373-201ENSMUST00000104584 89 ntBASIC0.41□□□□□ -2.34
Ccdc54Q9DAL3 Gm14626-201ENSMUST00000117619 216 ntBASIC0.41□□□□□ -2.34
Ccdc54Q9DAL3 Gm11644-201ENSMUST00000119735 150 ntBASIC0.41□□□□□ -2.34
Ccdc54Q9DAL3 Gm26484-201ENSMUST00000158018 106 ntBASIC0.41□□□□□ -2.34
Ccdc54Q9DAL3 Gm22606-201ENSMUST00000158290 103 ntBASIC0.41□□□□□ -2.34
Ccdc54Q9DAL3 Gm23857-201ENSMUST00000158379 111 ntBASIC0.41□□□□□ -2.34
Ccdc54Q9DAL3 Gm25976-201ENSMUST00000158695 130 ntBASIC0.41□□□□□ -2.34
Ccdc54Q9DAL3 Gm22139-201ENSMUST00000158747 105 ntBASIC0.41□□□□□ -2.34
Ccdc54Q9DAL3 Mir7657-201ENSMUST00000196051 57 ntBASIC0.41□□□□□ -2.34
Ccdc54Q9DAL3 Gm25814-201ENSMUST00000082754 107 ntBASIC0.41□□□□□ -2.34
Ccdc54Q9DAL3 Gm23947-201ENSMUST00000093636 107 ntBASIC0.41□□□□□ -2.34
Ccdc54Q9DAL3 Gm25610-201ENSMUST00000104016 129 ntBASIC0.4□□□□□ -2.35
Ccdc54Q9DAL3 Gm24750-201ENSMUST00000157843 104 ntBASIC0.4□□□□□ -2.35
Ccdc54Q9DAL3 Gm22520-201ENSMUST00000158269 129 ntBASIC0.4□□□□□ -2.35
Ccdc54Q9DAL3 Mir1966-201ENSMUST00000158807 108 ntBASIC0.4□□□□□ -2.35
Ccdc54Q9DAL3 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.4□□□□□ -2.35
Ccdc54Q9DAL3 Gm43432-201ENSMUST00000196352 121 ntBASIC0.4□□□□□ -2.35
Ccdc54Q9DAL3 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.4□□□□□ -2.35
Ccdc54Q9DAL3 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.4□□□□□ -2.35
Ccdc54Q9DAL3 Gm14884-201ENSMUST00000120456 196 ntBASIC0.39□□□□□ -2.35
Ccdc54Q9DAL3 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.39□□□□□ -2.35
Ccdc54Q9DAL3 Gm23605-201ENSMUST00000157255 127 ntBASIC0.39□□□□□ -2.35
Ccdc54Q9DAL3 Gm27993-201ENSMUST00000184362 85 ntBASIC0.39□□□□□ -2.35
Ccdc54Q9DAL3 Trbv25-201ENSMUST00000194700 273 ntBASIC0.39□□□□□ -2.35
Ccdc54Q9DAL3 Gm43749-201ENSMUST00000199345 352 ntBASIC0.39□□□□□ -2.35
Ccdc54Q9DAL3 Gm42935-201ENSMUST00000202004 151 ntBASIC0.39□□□□□ -2.35
Ccdc54Q9DAL3 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.38□□□□□ -2.35
Ccdc54Q9DAL3 Mir20b-201ENSMUST00000102087 80 ntBASIC0.38□□□□□ -2.35
Ccdc54Q9DAL3 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.38□□□□□ -2.35
Ccdc54Q9DAL3 Gm22706-201ENSMUST00000157907 112 ntBASIC0.38□□□□□ -2.35
Ccdc54Q9DAL3 Gm26158-201ENSMUST00000158973 119 ntBASIC0.38□□□□□ -2.35
Ccdc54Q9DAL3 Gm22565-201ENSMUST00000175540 69 ntBASIC0.38□□□□□ -2.35
Ccdc54Q9DAL3 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.38□□□□□ -2.35
Ccdc54Q9DAL3 Mir410-201ENSMUST00000083563 81 ntBASIC0.38□□□□□ -2.35
Ccdc54Q9DAL3 Gm23504-201ENSMUST00000158988 95 ntBASIC0.37□□□□□ -2.35
Ccdc54Q9DAL3 Gm16550-201ENSMUST00000162550 126 ntBASIC0.37□□□□□ -2.35
Ccdc54Q9DAL3 Gm25300-201ENSMUST00000175284 84 ntBASIC0.37□□□□□ -2.35
Ccdc54Q9DAL3 Gm37330-201ENSMUST00000192606 153 ntBASIC0.37□□□□□ -2.35
Ccdc54Q9DAL3 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms