Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trim42Q9D2H5 Gm24396-201ENSMUST00000116905 93 ntBASIC2.32□□□□□ -2.04
Trim42Q9D2H5 Gm23656-201ENSMUST00000122626 112 ntBASIC2.32□□□□□ -2.04
Trim42Q9D2H5 Gm26290-201ENSMUST00000158891 145 ntBASIC2.32□□□□□ -2.04
Trim42Q9D2H5 Gm7258-201ENSMUST00000179317 300 ntBASIC2.32□□□□□ -2.04
Trim42Q9D2H5 Snord43-201ENSMUST00000199549 108 ntBASIC2.32□□□□□ -2.04
Trim42Q9D2H5 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.32□□□□□ -2.04
Trim42Q9D2H5 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC2.32□□□□□ -2.04
Trim42Q9D2H5 Gm24661-201ENSMUST00000083205 104 ntBASIC2.32□□□□□ -2.04
Trim42Q9D2H5 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trim42Q9D2H5 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trim42Q9D2H5 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trim42Q9D2H5 Gm16510-201ENSMUST00000153501 249 ntBASIC2.31□□□□□ -2.04
Trim42Q9D2H5 Gm24900-201ENSMUST00000158128 134 ntBASIC2.31□□□□□ -2.04
Trim42Q9D2H5 Gm16539-201ENSMUST00000160086 327 ntBASIC2.31□□□□□ -2.04
Trim42Q9D2H5 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.31□□□□□ -2.04
Trim42Q9D2H5 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Trim42Q9D2H5 Gm24670-201ENSMUST00000104154 132 ntBASIC2.3□□□□□ -2.04
Trim42Q9D2H5 Gm11598-201ENSMUST00000119257 357 ntBASIC2.3□□□□□ -2.04
Trim42Q9D2H5 Gm24691-201ENSMUST00000157762 140 ntBASIC2.3□□□□□ -2.04
Trim42Q9D2H5 Gm24769-201ENSMUST00000158506 129 ntBASIC2.3□□□□□ -2.04
Trim42Q9D2H5 Gm43038-201ENSMUST00000202359 88 ntBASIC2.3□□□□□ -2.04
Trim42Q9D2H5 Gm25153-201ENSMUST00000157118 156 ntBASIC2.29□□□□□ -2.04
Trim42Q9D2H5 Gm25949-201ENSMUST00000175333 114 ntBASIC2.29□□□□□ -2.04
Trim42Q9D2H5 Gm27532-201ENSMUST00000183726 113 ntBASIC2.29□□□□□ -2.04
Trim42Q9D2H5 Mir6916-201ENSMUST00000184514 63 ntBASIC2.29□□□□□ -2.04
Trim42Q9D2H5 Snora3-201ENSMUST00000083082 132 ntBASIC2.29□□□□□ -2.04
Trim42Q9D2H5 Mir151-201ENSMUST00000083678 68 ntBASIC2.29□□□□□ -2.04
Trim42Q9D2H5 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trim42Q9D2H5 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trim42Q9D2H5 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Trim42Q9D2H5 Gm23726-201ENSMUST00000178937 67 ntBASIC2.28□□□□□ -2.04
Trim42Q9D2H5 Gm27979-201ENSMUST00000185126 56 ntBASIC2.28□□□□□ -2.04
Trim42Q9D2H5 Gm45452-201ENSMUST00000210905 177 ntBASIC2.28□□□□□ -2.04
Trim42Q9D2H5 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.28□□□□□ -2.04
Trim42Q9D2H5 Gm22884-201ENSMUST00000083127 140 ntBASIC2.28□□□□□ -2.04
Trim42Q9D2H5 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.28□□□□□ -2.04
Trim42Q9D2H5 Mir682-201ENSMUST00000102281 96 ntBASIC2.27□□□□□ -2.05
Trim42Q9D2H5 Gm25992-201ENSMUST00000102437 109 ntBASIC2.27□□□□□ -2.05
Trim42Q9D2H5 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trim42Q9D2H5 Mir7013-201ENSMUST00000183540 72 ntBASIC2.27□□□□□ -2.05
Trim42Q9D2H5 AC122769.2-201ENSMUST00000227248 302 ntBASIC2.27□□□□□ -2.05
Trim42Q9D2H5 Gm25038-201ENSMUST00000082928 130 ntBASIC2.27□□□□□ -2.05
Trim42Q9D2H5 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.26□□□□□ -2.05
Trim42Q9D2H5 Mir1949-201ENSMUST00000157434 141 ntBASIC2.26□□□□□ -2.05
Trim42Q9D2H5 Gm23900-201ENSMUST00000157569 108 ntBASIC2.26□□□□□ -2.05
Trim42Q9D2H5 Gm25368-201ENSMUST00000158847 131 ntBASIC2.26□□□□□ -2.05
Trim42Q9D2H5 Gm25994-201ENSMUST00000175392 101 ntBASIC2.26□□□□□ -2.05
Trim42Q9D2H5 Gm24575-201ENSMUST00000175502 77 ntBASIC2.26□□□□□ -2.05
Trim42Q9D2H5 Gm20118-201ENSMUST00000187207 162 ntBASIC2.26□□□□□ -2.05
Trim42Q9D2H5 Mir221-201ENSMUST00000083488 95 ntBASIC2.26□□□□□ -2.05
Trim42Q9D2H5 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trim42Q9D2H5 Gm22674-201ENSMUST00000104413 131 ntBASIC2.25□□□□□ -2.05
Trim42Q9D2H5 Mir654-201ENSMUST00000104787 84 ntBASIC2.25□□□□□ -2.05
Trim42Q9D2H5 Mir466k-201ENSMUST00000116774 122 ntBASIC2.25□□□□□ -2.05
Trim42Q9D2H5 Gm24378-201ENSMUST00000122699 106 ntBASIC2.25□□□□□ -2.05
Trim42Q9D2H5 Gm24223-201ENSMUST00000158827 90 ntBASIC2.25□□□□□ -2.05
Trim42Q9D2H5 Gm26499-201ENSMUST00000178544 79 ntBASIC2.25□□□□□ -2.05
Trim42Q9D2H5 Gm26096-201ENSMUST00000179084 79 ntBASIC2.25□□□□□ -2.05
Trim42Q9D2H5 Gm45197-201ENSMUST00000205288 151 ntBASIC2.25□□□□□ -2.05
Trim42Q9D2H5 Gm26207-201ENSMUST00000082909 104 ntBASIC2.25□□□□□ -2.05
Trim42Q9D2H5 Mir344c-201ENSMUST00000103919 92 ntBASIC2.24□□□□□ -2.05
Trim42Q9D2H5 Gm26247-201ENSMUST00000116702 91 ntBASIC2.24□□□□□ -2.05
Trim42Q9D2H5 Gm24509-201ENSMUST00000157086 101 ntBASIC2.24□□□□□ -2.05
Trim42Q9D2H5 Gm25358-201ENSMUST00000157189 101 ntBASIC2.24□□□□□ -2.05
Trim42Q9D2H5 Snora24-201ENSMUST00000174989 130 ntBASIC2.24□□□□□ -2.05
Trim42Q9D2H5 Gm23813-201ENSMUST00000175153 77 ntBASIC2.24□□□□□ -2.05
Trim42Q9D2H5 Gm22622-201ENSMUST00000082870 129 ntBASIC2.24□□□□□ -2.05
Trim42Q9D2H5 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trim42Q9D2H5 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC2.23□□□□□ -2.05
Trim42Q9D2H5 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.23□□□□□ -2.05
Trim42Q9D2H5 Gm25376-201ENSMUST00000104340 133 ntBASIC2.23□□□□□ -2.05
Trim42Q9D2H5 Gm22517-201ENSMUST00000158265 136 ntBASIC2.23□□□□□ -2.05
Trim42Q9D2H5 Gm23005-201ENSMUST00000158950 136 ntBASIC2.23□□□□□ -2.05
Trim42Q9D2H5 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.23□□□□□ -2.05
Trim42Q9D2H5 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.23□□□□□ -2.05
Trim42Q9D2H5 Gm24698-201ENSMUST00000083883 130 ntBASIC2.23□□□□□ -2.05
Trim42Q9D2H5 Gm24523-201ENSMUST00000083965 132 ntBASIC2.23□□□□□ -2.05
Trim42Q9D2H5 Gm14039-201ENSMUST00000118705 101 ntBASIC2.22□□□□□ -2.05
Trim42Q9D2H5 Gm25113-201ENSMUST00000157185 143 ntBASIC2.22□□□□□ -2.05
Trim42Q9D2H5 Gm26133-201ENSMUST00000157363 100 ntBASIC2.22□□□□□ -2.05
Trim42Q9D2H5 Mir6995-201ENSMUST00000183658 71 ntBASIC2.22□□□□□ -2.05
Trim42Q9D2H5 Gm27722-201ENSMUST00000183908 76 ntBASIC2.22□□□□□ -2.05
Trim42Q9D2H5 AC157602.1-201ENSMUST00000197446 105 ntBASIC2.22□□□□□ -2.05
Trim42Q9D2H5 Gm6293-201ENSMUST00000050339 195 ntBASIC2.22□□□□□ -2.05
Trim42Q9D2H5 Gm24907-201ENSMUST00000116932 128 ntBASIC2.21□□□□□ -2.06
Trim42Q9D2H5 Gm25901-201ENSMUST00000158494 130 ntBASIC2.21□□□□□ -2.06
Trim42Q9D2H5 Gm21885-201ENSMUST00000178891 327 ntBASIC2.21□□□□□ -2.06
Trim42Q9D2H5 Gm25870-201ENSMUST00000179845 79 ntBASIC2.21□□□□□ -2.06
Trim42Q9D2H5 Mir107-201ENSMUST00000083660 87 ntBASIC2.21□□□□□ -2.06
Trim42Q9D2H5 Mir532-201ENSMUST00000093630 96 ntBASIC2.21□□□□□ -2.06
Trim42Q9D2H5 Scarna9-201ENSMUST00000104318 70 ntBASIC2.2□□□□□ -2.06
Trim42Q9D2H5 Mir1191-201ENSMUST00000116883 120 ntBASIC2.2□□□□□ -2.06
Trim42Q9D2H5 Gm24937-201ENSMUST00000122597 134 ntBASIC2.2□□□□□ -2.06
Trim42Q9D2H5 Gm24770-201ENSMUST00000158505 92 ntBASIC2.2□□□□□ -2.06
Trim42Q9D2H5 Gm24922-201ENSMUST00000158511 102 ntBASIC2.2□□□□□ -2.06
Trim42Q9D2H5 Gm26214-201ENSMUST00000158581 107 ntBASIC2.2□□□□□ -2.06
Trim42Q9D2H5 Mir6390-201ENSMUST00000184405 129 ntBASIC2.2□□□□□ -2.06
Trim42Q9D2H5 Mir6419-201ENSMUST00000184784 113 ntBASIC2.2□□□□□ -2.06
Trim42Q9D2H5 Gm43865-201ENSMUST00000204721 127 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 177.6 ms