Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.56□□□□□ -2.32
Vps28Q9D1C8 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
Vps28Q9D1C8 Gm24342-201ENSMUST00000103907 104 ntBASIC0.55□□□□□ -2.32
Vps28Q9D1C8 Gm22469-201ENSMUST00000104118 133 ntBASIC0.55□□□□□ -2.32
Vps28Q9D1C8 Scarna9-201ENSMUST00000104318 70 ntBASIC0.55□□□□□ -2.32
Vps28Q9D1C8 Gm25300-201ENSMUST00000175284 84 ntBASIC0.55□□□□□ -2.32
Vps28Q9D1C8 Gm27993-201ENSMUST00000184362 85 ntBASIC0.55□□□□□ -2.32
Vps28Q9D1C8 Gm24030-201ENSMUST00000083931 164 ntBASIC0.55□□□□□ -2.32
Vps28Q9D1C8 Gm14884-201ENSMUST00000120456 196 ntBASIC0.54□□□□□ -2.32
Vps28Q9D1C8 Gm23605-201ENSMUST00000157255 127 ntBASIC0.54□□□□□ -2.32
Vps28Q9D1C8 Gm25653-201ENSMUST00000158473 138 ntBASIC0.54□□□□□ -2.32
Vps28Q9D1C8 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.54□□□□□ -2.32
Vps28Q9D1C8 Gm24258-201ENSMUST00000083739 133 ntBASIC0.54□□□□□ -2.32
Vps28Q9D1C8 Gm24963-201ENSMUST00000157916 144 ntBASIC0.53□□□□□ -2.32
Vps28Q9D1C8 Gm37330-201ENSMUST00000192606 153 ntBASIC0.53□□□□□ -2.32
Vps28Q9D1C8 Gm23461-201ENSMUST00000083265 107 ntBASIC0.53□□□□□ -2.32
Vps28Q9D1C8 Mir1899-201ENSMUST00000122798 96 ntBASIC0.52□□□□□ -2.33
Vps28Q9D1C8 Gm24575-201ENSMUST00000175502 77 ntBASIC0.52□□□□□ -2.33
Vps28Q9D1C8 Mir7010-201ENSMUST00000183464 63 ntBASIC0.52□□□□□ -2.33
Vps28Q9D1C8 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.52□□□□□ -2.33
Vps28Q9D1C8 Gm23301-201ENSMUST00000082713 65 ntBASIC0.52□□□□□ -2.33
Vps28Q9D1C8 Snord60-201ENSMUST00000082834 78 ntBASIC0.52□□□□□ -2.33
Vps28Q9D1C8 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.52□□□□□ -2.33
Vps28Q9D1C8 Gm24232-201ENSMUST00000104314 132 ntBASIC0.51□□□□□ -2.33
Vps28Q9D1C8 Gm14626-201ENSMUST00000117619 216 ntBASIC0.51□□□□□ -2.33
Vps28Q9D1C8 Gm23859-201ENSMUST00000158383 64 ntBASIC0.51□□□□□ -2.33
Vps28Q9D1C8 Gm27446-201ENSMUST00000183963 89 ntBASIC0.51□□□□□ -2.33
Vps28Q9D1C8 Gm37624-201ENSMUST00000193751 219 ntBASIC0.51□□□□□ -2.33
Vps28Q9D1C8 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Vps28Q9D1C8 Gm23321-201ENSMUST00000104465 126 ntBASIC0.5□□□□□ -2.33
Vps28Q9D1C8 Gm20409-201ENSMUST00000173457 130 ntBASIC0.5□□□□□ -2.33
Vps28Q9D1C8 Gm44353-201ENSMUST00000200618 138 ntBASIC0.5□□□□□ -2.33
Vps28Q9D1C8 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.5□□□□□ -2.33
Vps28Q9D1C8 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
Vps28Q9D1C8 Gm24590-201ENSMUST00000116699 119 ntBASIC0.49□□□□□ -2.33
Vps28Q9D1C8 Gm14502-201ENSMUST00000118154 113 ntBASIC0.49□□□□□ -2.33
Vps28Q9D1C8 Gm22989-201ENSMUST00000158313 86 ntBASIC0.49□□□□□ -2.33
Vps28Q9D1C8 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.49□□□□□ -2.33
Vps28Q9D1C8 Mir100-201ENSMUST00000175270 80 ntBASIC0.49□□□□□ -2.33
Vps28Q9D1C8 Gm26285-201ENSMUST00000177923 107 ntBASIC0.49□□□□□ -2.33
Vps28Q9D1C8 Mir7657-201ENSMUST00000196051 57 ntBASIC0.49□□□□□ -2.33
Vps28Q9D1C8 Mir3969-201ENSMUST00000197106 92 ntBASIC0.49□□□□□ -2.33
Vps28Q9D1C8 Gm44922-201ENSMUST00000206690 90 ntBASIC0.49□□□□□ -2.33
Vps28Q9D1C8 Gm5002-201ENSMUST00000207145 223 ntBASIC0.49□□□□□ -2.33
Vps28Q9D1C8 Gm23622-201ENSMUST00000082460 107 ntBASIC0.49□□□□□ -2.33
Vps28Q9D1C8 Gm10172-201ENSMUST00000085929 558 ntBASIC0.49□□□□□ -2.33
Vps28Q9D1C8 Gm23881-201ENSMUST00000116872 66 ntBASIC0.47□□□□□ -2.33
Vps28Q9D1C8 Gm25393-201ENSMUST00000157336 285 ntBASIC0.47□□□□□ -2.33
Vps28Q9D1C8 Gm42623-201ENSMUST00000197225 379 ntBASIC0.47□□□□□ -2.33
Vps28Q9D1C8 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.47□□□□□ -2.33
Vps28Q9D1C8 Mir20b-201ENSMUST00000102087 80 ntBASIC0.46□□□□□ -2.34
Vps28Q9D1C8 Mir1298-201ENSMUST00000116681 98 ntBASIC0.46□□□□□ -2.34
Vps28Q9D1C8 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.46□□□□□ -2.34
Vps28Q9D1C8 Gm26403-201ENSMUST00000158500 105 ntBASIC0.46□□□□□ -2.34
Vps28Q9D1C8 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.46□□□□□ -2.34
Vps28Q9D1C8 Gm25416-201ENSMUST00000104221 107 ntBASIC0.45□□□□□ -2.34
Vps28Q9D1C8 Gm10548-202ENSMUST00000165672 272 ntBASIC0.45□□□□□ -2.34
Vps28Q9D1C8 Gm18665-201ENSMUST00000189783 270 ntBASIC0.45□□□□□ -2.34
Vps28Q9D1C8 Gm43432-201ENSMUST00000196352 121 ntBASIC0.45□□□□□ -2.34
Vps28Q9D1C8 Gm44469-201ENSMUST00000198558 79 ntBASIC0.45□□□□□ -2.34
Vps28Q9D1C8 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Vps28Q9D1C8 Gm22348-201ENSMUST00000178674 79 ntBASIC0.44□□□□□ -2.34
Vps28Q9D1C8 Gm27694-201ENSMUST00000184740 86 ntBASIC0.44□□□□□ -2.34
Vps28Q9D1C8 Gm3702-201ENSMUST00000211754 346 ntBASIC0.44□□□□□ -2.34
Vps28Q9D1C8 Snord61-201ENSMUST00000083176 71 ntBASIC0.44□□□□□ -2.34
Vps28Q9D1C8 Gm23672-201ENSMUST00000157471 107 ntBASIC0.43□□□□□ -2.34
Vps28Q9D1C8 Gm26158-201ENSMUST00000158973 119 ntBASIC0.43□□□□□ -2.34
Vps28Q9D1C8 Gm23917-201ENSMUST00000175256 98 ntBASIC0.43□□□□□ -2.34
Vps28Q9D1C8 Gm27803-201ENSMUST00000183763 119 ntBASIC0.43□□□□□ -2.34
Vps28Q9D1C8 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.43□□□□□ -2.34
Vps28Q9D1C8 Mir200a-201ENSMUST00000083466 90 ntBASIC0.43□□□□□ -2.34
Vps28Q9D1C8 Mir377-201ENSMUST00000083504 68 ntBASIC0.43□□□□□ -2.34
Vps28Q9D1C8 Mir200b-201ENSMUST00000083615 70 ntBASIC0.43□□□□□ -2.34
Vps28Q9D1C8 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Vps28Q9D1C8 Gm26468-201ENSMUST00000158644 106 ntBASIC0.42□□□□□ -2.34
Vps28Q9D1C8 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.42□□□□□ -2.34
Vps28Q9D1C8 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.42□□□□□ -2.34
Vps28Q9D1C8 Gm22983-201ENSMUST00000158308 104 ntBASIC0.41□□□□□ -2.34
Vps28Q9D1C8 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Vps28Q9D1C8 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Vps28Q9D1C8 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Vps28Q9D1C8 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Vps28Q9D1C8 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Vps28Q9D1C8 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Vps28Q9D1C8 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Vps28Q9D1C8 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Vps28Q9D1C8 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Vps28Q9D1C8 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.41□□□□□ -2.34
Vps28Q9D1C8 Mir219b-201ENSMUST00000198317 65 ntBASIC0.41□□□□□ -2.34
Vps28Q9D1C8 Gm45541-201ENSMUST00000210443 54 ntBASIC0.41□□□□□ -2.34
Vps28Q9D1C8 Gm26303-201ENSMUST00000116845 119 ntBASIC0.4□□□□□ -2.35
Vps28Q9D1C8 Gm22967-201ENSMUST00000157956 239 ntBASIC0.4□□□□□ -2.35
Vps28Q9D1C8 Gm26097-201ENSMUST00000179642 93 ntBASIC0.4□□□□□ -2.35
Vps28Q9D1C8 Gm27792-201ENSMUST00000184031 115 ntBASIC0.4□□□□□ -2.35
Vps28Q9D1C8 Mir21b-201ENSMUST00000184317 108 ntBASIC0.4□□□□□ -2.35
Vps28Q9D1C8 Gm25496-201ENSMUST00000104430 120 ntBASIC0.39□□□□□ -2.35
Vps28Q9D1C8 Gm12469-201ENSMUST00000117623 207 ntBASIC0.39□□□□□ -2.35
Vps28Q9D1C8 Gm25329-201ENSMUST00000158041 126 ntBASIC0.39□□□□□ -2.35
Vps28Q9D1C8 Gm23857-201ENSMUST00000158379 111 ntBASIC0.39□□□□□ -2.35
Vps28Q9D1C8 Gm37746-201ENSMUST00000193249 198 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 138.6 ms