Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm24476-201ENSMUST00000157437 131 ntBASIC1.02□□□□□ -2.25
Ddx56Q9D0R4 Gm25768-201ENSMUST00000158570 98 ntBASIC1.02□□□□□ -2.25
Ddx56Q9D0R4 Gm23504-201ENSMUST00000158988 95 ntBASIC1.02□□□□□ -2.25
Ddx56Q9D0R4 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.02□□□□□ -2.25
Ddx56Q9D0R4 Gm44301-201ENSMUST00000200362 143 ntBASIC1.02□□□□□ -2.25
Ddx56Q9D0R4 AC165138.1-201ENSMUST00000226984 270 ntBASIC1.02□□□□□ -2.25
Ddx56Q9D0R4 Gm23445-201ENSMUST00000082800 107 ntBASIC1.02□□□□□ -2.25
Ddx56Q9D0R4 Snord69-201ENSMUST00000104024 80 ntBASIC1.01□□□□□ -2.25
Ddx56Q9D0R4 Gm24678-201ENSMUST00000158756 104 ntBASIC1.01□□□□□ -2.25
Ddx56Q9D0R4 Gm23714-201ENSMUST00000179259 105 ntBASIC1.01□□□□□ -2.25
Ddx56Q9D0R4 Mir6380-201ENSMUST00000184334 81 ntBASIC1.01□□□□□ -2.25
Ddx56Q9D0R4 Gm25797-201ENSMUST00000082640 107 ntBASIC1.01□□□□□ -2.25
Ddx56Q9D0R4 Gm24461-201ENSMUST00000082735 103 ntBASIC1.01□□□□□ -2.25
Ddx56Q9D0R4 Gm26011-201ENSMUST00000104410 104 ntBASIC1□□□□□ -2.25
Ddx56Q9D0R4 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1□□□□□ -2.25
Ddx56Q9D0R4 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1□□□□□ -2.25
Ddx56Q9D0R4 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1□□□□□ -2.25
Ddx56Q9D0R4 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1□□□□□ -2.25
Ddx56Q9D0R4 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1□□□□□ -2.25
Ddx56Q9D0R4 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1□□□□□ -2.25
Ddx56Q9D0R4 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1□□□□□ -2.25
Ddx56Q9D0R4 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1□□□□□ -2.25
Ddx56Q9D0R4 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1□□□□□ -2.25
Ddx56Q9D0R4 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1□□□□□ -2.25
Ddx56Q9D0R4 Gm36956-201ENSMUST00000193830 214 ntBASIC1□□□□□ -2.25
Ddx56Q9D0R4 Gm43911-201ENSMUST00000203097 76 ntBASIC1□□□□□ -2.25
Ddx56Q9D0R4 Gm24575-201ENSMUST00000175502 77 ntBASIC0.99□□□□□ -2.25
Ddx56Q9D0R4 Gm27993-201ENSMUST00000184362 85 ntBASIC0.99□□□□□ -2.25
Ddx56Q9D0R4 Gm43749-201ENSMUST00000199345 352 ntBASIC0.99□□□□□ -2.25
Ddx56Q9D0R4 Gm22753-201ENSMUST00000083657 107 ntBASIC0.99□□□□□ -2.25
Ddx56Q9D0R4 Gm24030-201ENSMUST00000083931 164 ntBASIC0.99□□□□□ -2.25
Ddx56Q9D0R4 Gm24942-201ENSMUST00000158328 114 ntBASIC0.98□□□□□ -2.25
Ddx56Q9D0R4 Gm24154-201ENSMUST00000175261 130 ntBASIC0.98□□□□□ -2.25
Ddx56Q9D0R4 Gm37330-201ENSMUST00000192606 153 ntBASIC0.98□□□□□ -2.25
Ddx56Q9D0R4 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.98□□□□□ -2.25
Ddx56Q9D0R4 AC168880.2-201ENSMUST00000224488 201 ntBASIC0.98□□□□□ -2.25
Ddx56Q9D0R4 Snord60-201ENSMUST00000082834 78 ntBASIC0.98□□□□□ -2.25
Ddx56Q9D0R4 Gm22786-201ENSMUST00000104086 122 ntBASIC0.97□□□□□ -2.25
Ddx56Q9D0R4 Gm22544-201ENSMUST00000104349 127 ntBASIC0.97□□□□□ -2.25
Ddx56Q9D0R4 Gm23329-201ENSMUST00000157415 108 ntBASIC0.97□□□□□ -2.25
Ddx56Q9D0R4 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.97□□□□□ -2.25
Ddx56Q9D0R4 Gm23416-201ENSMUST00000175520 95 ntBASIC0.97□□□□□ -2.25
Ddx56Q9D0R4 Mir6240-201ENSMUST00000184281 117 ntBASIC0.97□□□□□ -2.25
Ddx56Q9D0R4 Gm23722-201ENSMUST00000083002 130 ntBASIC0.97□□□□□ -2.25
Ddx56Q9D0R4 Gm25138-201ENSMUST00000083248 136 ntBASIC0.97□□□□□ -2.25
Ddx56Q9D0R4 Mir669b-201ENSMUST00000102172 97 ntBASIC0.96□□□□□ -2.26
Ddx56Q9D0R4 Gm24263-201ENSMUST00000104059 107 ntBASIC0.96□□□□□ -2.26
Ddx56Q9D0R4 Gm26018-201ENSMUST00000104406 128 ntBASIC0.96□□□□□ -2.26
Ddx56Q9D0R4 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.96□□□□□ -2.26
Ddx56Q9D0R4 Gm25329-201ENSMUST00000158041 126 ntBASIC0.96□□□□□ -2.26
Ddx56Q9D0R4 Mir7059-201ENSMUST00000184825 59 ntBASIC0.96□□□□□ -2.26
Ddx56Q9D0R4 Gm42935-201ENSMUST00000202004 151 ntBASIC0.96□□□□□ -2.26
Ddx56Q9D0R4 Gm23301-201ENSMUST00000082713 65 ntBASIC0.96□□□□□ -2.26
Ddx56Q9D0R4 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
Ddx56Q9D0R4 Gm26082-201ENSMUST00000104070 127 ntBASIC0.95□□□□□ -2.26
Ddx56Q9D0R4 Gm25378-201ENSMUST00000104333 129 ntBASIC0.95□□□□□ -2.26
Ddx56Q9D0R4 Gm24683-201ENSMUST00000104840 88 ntBASIC0.95□□□□□ -2.26
Ddx56Q9D0R4 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.95□□□□□ -2.26
Ddx56Q9D0R4 Mir1899-201ENSMUST00000122798 96 ntBASIC0.95□□□□□ -2.26
Ddx56Q9D0R4 Gm44488-201ENSMUST00000199467 119 ntBASIC0.95□□□□□ -2.26
Ddx56Q9D0R4 Gm44211-201ENSMUST00000204867 145 ntBASIC0.95□□□□□ -2.26
Ddx56Q9D0R4 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.95□□□□□ -2.26
Ddx56Q9D0R4 Gm23253-201ENSMUST00000157441 104 ntBASIC0.94□□□□□ -2.26
Ddx56Q9D0R4 Gm24718-201ENSMUST00000157521 136 ntBASIC0.94□□□□□ -2.26
Ddx56Q9D0R4 Gm26084-201ENSMUST00000157903 104 ntBASIC0.94□□□□□ -2.26
Ddx56Q9D0R4 Gm25901-201ENSMUST00000158494 130 ntBASIC0.94□□□□□ -2.26
Ddx56Q9D0R4 Gm28435-201ENSMUST00000185496 108 ntBASIC0.94□□□□□ -2.26
Ddx56Q9D0R4 Snord33-201ENSMUST00000083694 84 ntBASIC0.94□□□□□ -2.26
Ddx56Q9D0R4 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.93□□□□□ -2.26
Ddx56Q9D0R4 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC0.93□□□□□ -2.26
Ddx56Q9D0R4 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.93□□□□□ -2.26
Ddx56Q9D0R4 Gm11248-201ENSMUST00000119568 201 ntBASIC0.92□□□□□ -2.26
Ddx56Q9D0R4 Gm24141-201ENSMUST00000122776 115 ntBASIC0.92□□□□□ -2.26
Ddx56Q9D0R4 Gm24246-201ENSMUST00000157315 132 ntBASIC0.92□□□□□ -2.26
Ddx56Q9D0R4 Gm23760-201ENSMUST00000158350 116 ntBASIC0.92□□□□□ -2.26
Ddx56Q9D0R4 Gm44469-201ENSMUST00000198558 79 ntBASIC0.92□□□□□ -2.26
Ddx56Q9D0R4 Gm23881-201ENSMUST00000116872 66 ntBASIC0.91□□□□□ -2.26
Ddx56Q9D0R4 Gm27587-201ENSMUST00000185116 163 ntBASIC0.91□□□□□ -2.26
Ddx56Q9D0R4 Trbv25-201ENSMUST00000194700 273 ntBASIC0.91□□□□□ -2.26
Ddx56Q9D0R4 Gm25820-201ENSMUST00000198589 127 ntBASIC0.91□□□□□ -2.26
Ddx56Q9D0R4 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.91□□□□□ -2.26
Ddx56Q9D0R4 Mir196b-201ENSMUST00000083509 85 ntBASIC0.91□□□□□ -2.26
Ddx56Q9D0R4 Gm23989-201ENSMUST00000117030 66 ntBASIC0.9□□□□□ -2.27
Ddx56Q9D0R4 Gm6985-201ENSMUST00000121255 271 ntBASIC0.9□□□□□ -2.27
Ddx56Q9D0R4 Gm23328-201ENSMUST00000157418 132 ntBASIC0.9□□□□□ -2.27
Ddx56Q9D0R4 Gm20386-201ENSMUST00000174010 132 ntBASIC0.9□□□□□ -2.27
Ddx56Q9D0R4 Gm26398-201ENSMUST00000179015 127 ntBASIC0.9□□□□□ -2.27
Ddx56Q9D0R4 Gm27894-201ENSMUST00000184177 92 ntBASIC0.9□□□□□ -2.27
Ddx56Q9D0R4 Gm26379-202ENSMUST00000200225 132 ntBASIC0.9□□□□□ -2.27
Ddx56Q9D0R4 Gm24624-201ENSMUST00000082617 164 ntBASIC0.9□□□□□ -2.27
Ddx56Q9D0R4 Mir27b-201ENSMUST00000083541 73 ntBASIC0.9□□□□□ -2.27
Ddx56Q9D0R4 Gm25715-201ENSMUST00000158627 125 ntBASIC0.89□□□□□ -2.27
Ddx56Q9D0R4 Gm10548-202ENSMUST00000165672 272 ntBASIC0.89□□□□□ -2.27
Ddx56Q9D0R4 Mir3968-201ENSMUST00000175355 100 ntBASIC0.89□□□□□ -2.27
Ddx56Q9D0R4 Mir7052-201ENSMUST00000184821 65 ntBASIC0.89□□□□□ -2.27
Ddx56Q9D0R4 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Ddx56Q9D0R4 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.88□□□□□ -2.27
Ddx56Q9D0R4 Gm15289-201ENSMUST00000117793 244 ntBASIC0.88□□□□□ -2.27
Ddx56Q9D0R4 Gm27668-201ENSMUST00000184188 120 ntBASIC0.88□□□□□ -2.27
Ddx56Q9D0R4 Gm25081-201ENSMUST00000082534 108 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms