Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm23047-201ENSMUST00000177661 94 ntBASIC-0.02□□□□□ -2.41
Ccdc43Q9CR29 Gm25703-201ENSMUST00000083123 151 ntBASIC-0.02□□□□□ -2.41
Ccdc43Q9CR29 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.03□□□□□ -2.41
Ccdc43Q9CR29 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
Ccdc43Q9CR29 Gm22433-201ENSMUST00000158550 142 ntBASIC-0.03□□□□□ -2.41
Ccdc43Q9CR29 Gm24761-201ENSMUST00000179589 127 ntBASIC-0.03□□□□□ -2.41
Ccdc43Q9CR29 Mir6928-201ENSMUST00000185166 70 ntBASIC-0.03□□□□□ -2.41
Ccdc43Q9CR29 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.03□□□□□ -2.41
Ccdc43Q9CR29 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.03□□□□□ -2.41
Ccdc43Q9CR29 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.03□□□□□ -2.41
Ccdc43Q9CR29 Snord82-201ENSMUST00000082889 70 ntBASIC-0.03□□□□□ -2.41
Ccdc43Q9CR29 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.04□□□□□ -2.42
Ccdc43Q9CR29 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.04□□□□□ -2.42
Ccdc43Q9CR29 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.04□□□□□ -2.42
Ccdc43Q9CR29 Gm25787-201ENSMUST00000104709 92 ntBASIC-0.04□□□□□ -2.42
Ccdc43Q9CR29 Gm22145-201ENSMUST00000157396 148 ntBASIC-0.04□□□□□ -2.42
Ccdc43Q9CR29 Gm24238-201ENSMUST00000157792 98 ntBASIC-0.04□□□□□ -2.42
Ccdc43Q9CR29 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.04□□□□□ -2.42
Ccdc43Q9CR29 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.04□□□□□ -2.42
Ccdc43Q9CR29 Gm24729-201ENSMUST00000158225 137 ntBASIC-0.04□□□□□ -2.42
Ccdc43Q9CR29 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC-0.04□□□□□ -2.42
Ccdc43Q9CR29 Gm27476-201ENSMUST00000183366 104 ntBASIC-0.04□□□□□ -2.42
Ccdc43Q9CR29 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.04□□□□□ -2.42
Ccdc43Q9CR29 Trav5-2-201ENSMUST00000199855 280 ntBASIC-0.04□□□□□ -2.42
Ccdc43Q9CR29 Gm22744-201ENSMUST00000083444 65 ntBASIC-0.04□□□□□ -2.42
Ccdc43Q9CR29 Mir9-2-201ENSMUST00000083490 72 ntBASIC-0.04□□□□□ -2.42
Ccdc43Q9CR29 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.05□□□□□ -2.42
Ccdc43Q9CR29 Gm22079-201ENSMUST00000157592 106 ntBASIC-0.05□□□□□ -2.42
Ccdc43Q9CR29 Gm23892-201ENSMUST00000158105 130 ntBASIC-0.06□□□□□ -2.42
Ccdc43Q9CR29 Gm26360-201ENSMUST00000158872 103 ntBASIC-0.07□□□□□ -2.42
Ccdc43Q9CR29 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.07□□□□□ -2.42
Ccdc43Q9CR29 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.07□□□□□ -2.42
Ccdc43Q9CR29 Gm44345-201ENSMUST00000199560 135 ntBASIC-0.07□□□□□ -2.42
Ccdc43Q9CR29 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.08□□□□□ -2.42
Ccdc43Q9CR29 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.08□□□□□ -2.42
Ccdc43Q9CR29 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.08□□□□□ -2.42
Ccdc43Q9CR29 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.08□□□□□ -2.42
Ccdc43Q9CR29 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.09□□□□□ -2.42
Ccdc43Q9CR29 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.09□□□□□ -2.42
Ccdc43Q9CR29 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.09□□□□□ -2.42
Ccdc43Q9CR29 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.09□□□□□ -2.42
Ccdc43Q9CR29 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.09□□□□□ -2.42
Ccdc43Q9CR29 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.09□□□□□ -2.42
Ccdc43Q9CR29 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.1□□□□□ -2.43
Ccdc43Q9CR29 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.1□□□□□ -2.43
Ccdc43Q9CR29 Gm25397-201ENSMUST00000176951 92 ntBASIC-0.1□□□□□ -2.43
Ccdc43Q9CR29 Gm27905-201ENSMUST00000184005 207 ntBASIC-0.1□□□□□ -2.43
Ccdc43Q9CR29 Mir7657-201ENSMUST00000196051 57 ntBASIC-0.1□□□□□ -2.43
Ccdc43Q9CR29 Mir466p-201ENSMUST00000103925 89 ntBASIC-0.11□□□□□ -2.43
Ccdc43Q9CR29 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.11□□□□□ -2.43
Ccdc43Q9CR29 Gm22946-201ENSMUST00000158558 82 ntBASIC-0.11□□□□□ -2.43
Ccdc43Q9CR29 Gm23987-201ENSMUST00000117039 129 ntBASIC-0.12□□□□□ -2.43
Ccdc43Q9CR29 Gm25247-201ENSMUST00000175475 90 ntBASIC-0.12□□□□□ -2.43
Ccdc43Q9CR29 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.12□□□□□ -2.43
Ccdc43Q9CR29 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.12□□□□□ -2.43
Ccdc43Q9CR29 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.13□□□□□ -2.43
Ccdc43Q9CR29 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.13□□□□□ -2.43
Ccdc43Q9CR29 Mir382-201ENSMUST00000083494 76 ntBASIC-0.14□□□□□ -2.43
Ccdc43Q9CR29 Gm22340-201ENSMUST00000157717 114 ntBASIC-0.15□□□□□ -2.43
Ccdc43Q9CR29 Gm22612-201ENSMUST00000158293 101 ntBASIC-0.15□□□□□ -2.43
Ccdc43Q9CR29 Snora15-201ENSMUST00000177461 131 ntBASIC-0.15□□□□□ -2.43
Ccdc43Q9CR29 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-0.15□□□□□ -2.43
Ccdc43Q9CR29 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-0.15□□□□□ -2.43
Ccdc43Q9CR29 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-0.15□□□□□ -2.43
Ccdc43Q9CR29 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-0.15□□□□□ -2.43
Ccdc43Q9CR29 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-0.15□□□□□ -2.43
Ccdc43Q9CR29 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-0.15□□□□□ -2.43
Ccdc43Q9CR29 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-0.15□□□□□ -2.43
Ccdc43Q9CR29 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-0.15□□□□□ -2.43
Ccdc43Q9CR29 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-0.15□□□□□ -2.43
Ccdc43Q9CR29 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-0.15□□□□□ -2.43
Ccdc43Q9CR29 Mir201-201ENSMUST00000083470 66 ntBASIC-0.15□□□□□ -2.43
Ccdc43Q9CR29 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.15□□□□□ -2.43
Ccdc43Q9CR29 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.16□□□□□ -2.44
Ccdc43Q9CR29 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.16□□□□□ -2.44
Ccdc43Q9CR29 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.16□□□□□ -2.44
Ccdc43Q9CR29 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC-0.16□□□□□ -2.44
Ccdc43Q9CR29 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.16□□□□□ -2.44
Ccdc43Q9CR29 Mir3969-201ENSMUST00000197106 92 ntBASIC-0.16□□□□□ -2.44
Ccdc43Q9CR29 AC122320.1-201ENSMUST00000227233 105 ntBASIC-0.16□□□□□ -2.44
Ccdc43Q9CR29 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.17□□□□□ -2.44
Ccdc43Q9CR29 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC-0.17□□□□□ -2.44
Ccdc43Q9CR29 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.17□□□□□ -2.44
Ccdc43Q9CR29 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.17□□□□□ -2.44
Ccdc43Q9CR29 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.17□□□□□ -2.44
Ccdc43Q9CR29 Snord85-201ENSMUST00000083262 73 ntBASIC-0.17□□□□□ -2.44
Ccdc43Q9CR29 Gm11936-201ENSMUST00000118323 160 ntBASIC-0.18□□□□□ -2.44
Ccdc43Q9CR29 Gm23545-201ENSMUST00000158205 104 ntBASIC-0.18□□□□□ -2.44
Ccdc43Q9CR29 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.18□□□□□ -2.44
Ccdc43Q9CR29 Gm44490-201ENSMUST00000198566 127 ntBASIC-0.18□□□□□ -2.44
Ccdc43Q9CR29 Mir18-201ENSMUST00000083469 96 ntBASIC-0.18□□□□□ -2.44
Ccdc43Q9CR29 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.19□□□□□ -2.44
Ccdc43Q9CR29 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.19□□□□□ -2.44
Ccdc43Q9CR29 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.19□□□□□ -2.44
Ccdc43Q9CR29 Gm25654-201ENSMUST00000158467 88 ntBASIC-0.19□□□□□ -2.44
Ccdc43Q9CR29 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.19□□□□□ -2.44
Ccdc43Q9CR29 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.19□□□□□ -2.44
Ccdc43Q9CR29 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.19□□□□□ -2.44
Ccdc43Q9CR29 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.2□□□□□ -2.44
Ccdc43Q9CR29 Gm27446-201ENSMUST00000183963 89 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 144.2 ms