Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.43□□□□□ -2.02
Trim11Q99PQ2 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.43□□□□□ -2.02
Trim11Q99PQ2 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2.43□□□□□ -2.02
Trim11Q99PQ2 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC2.43□□□□□ -2.02
Trim11Q99PQ2 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC2.43□□□□□ -2.02
Trim11Q99PQ2 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC2.43□□□□□ -2.02
Trim11Q99PQ2 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC2.43□□□□□ -2.02
Trim11Q99PQ2 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.43□□□□□ -2.02
Trim11Q99PQ2 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.43□□□□□ -2.02
Trim11Q99PQ2 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trim11Q99PQ2 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Trim11Q99PQ2 Gm25322-201ENSMUST00000122556 104 ntBASIC2.42□□□□□ -2.02
Trim11Q99PQ2 Gm25899-201ENSMUST00000082672 141 ntBASIC2.42□□□□□ -2.02
Trim11Q99PQ2 Snora69-201ENSMUST00000083708 131 ntBASIC2.42□□□□□ -2.02
Trim11Q99PQ2 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.42□□□□□ -2.02
Trim11Q99PQ2 Mir20b-201ENSMUST00000102087 80 ntBASIC2.41□□□□□ -2.02
Trim11Q99PQ2 Gm24384-201ENSMUST00000122693 75 ntBASIC2.41□□□□□ -2.02
Trim11Q99PQ2 Gm23548-201ENSMUST00000158963 106 ntBASIC2.41□□□□□ -2.02
Trim11Q99PQ2 Gm27419-201ENSMUST00000184576 109 ntBASIC2.41□□□□□ -2.02
Trim11Q99PQ2 Mir497-201ENSMUST00000200557 84 ntBASIC2.41□□□□□ -2.02
Trim11Q99PQ2 Gm23570-201ENSMUST00000083029 104 ntBASIC2.41□□□□□ -2.02
Trim11Q99PQ2 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trim11Q99PQ2 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trim11Q99PQ2 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.02
Trim11Q99PQ2 Gm26015-201ENSMUST00000104402 125 ntBASIC2.4□□□□□ -2.03
Trim11Q99PQ2 Gm23785-201ENSMUST00000116741 96 ntBASIC2.4□□□□□ -2.03
Trim11Q99PQ2 Gm24907-201ENSMUST00000116932 128 ntBASIC2.4□□□□□ -2.03
Trim11Q99PQ2 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.4□□□□□ -2.03
Trim11Q99PQ2 Gm24237-201ENSMUST00000157790 132 ntBASIC2.4□□□□□ -2.03
Trim11Q99PQ2 Mir30f-201ENSMUST00000196073 92 ntBASIC2.4□□□□□ -2.03
Trim11Q99PQ2 Gm44966-201ENSMUST00000208096 157 ntBASIC2.4□□□□□ -2.03
Trim11Q99PQ2 Gm25798-201ENSMUST00000082641 107 ntBASIC2.4□□□□□ -2.03
Trim11Q99PQ2 Gm25635-201ENSMUST00000082675 131 ntBASIC2.4□□□□□ -2.03
Trim11Q99PQ2 Gm24868-201ENSMUST00000157265 136 ntBASIC2.39□□□□□ -2.03
Trim11Q99PQ2 Gm24077-201ENSMUST00000158183 136 ntBASIC2.39□□□□□ -2.03
Trim11Q99PQ2 Gm25044-201ENSMUST00000158603 104 ntBASIC2.39□□□□□ -2.03
Trim11Q99PQ2 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.39□□□□□ -2.03
Trim11Q99PQ2 Gm25750-201ENSMUST00000175483 112 ntBASIC2.39□□□□□ -2.03
Trim11Q99PQ2 Gm43865-201ENSMUST00000204721 127 ntBASIC2.39□□□□□ -2.03
Trim11Q99PQ2 Gm14884-201ENSMUST00000120456 196 ntBASIC2.38□□□□□ -2.03
Trim11Q99PQ2 Gm23656-201ENSMUST00000122626 112 ntBASIC2.38□□□□□ -2.03
Trim11Q99PQ2 Gm22159-201ENSMUST00000158412 130 ntBASIC2.38□□□□□ -2.03
Trim11Q99PQ2 Gm20391-201ENSMUST00000174722 106 ntBASIC2.38□□□□□ -2.03
Trim11Q99PQ2 Gm25460-201ENSMUST00000157954 127 ntBASIC2.37□□□□□ -2.03
Trim11Q99PQ2 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trim11Q99PQ2 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Trim11Q99PQ2 Gm26485-201ENSMUST00000158019 64 ntBASIC2.36□□□□□ -2.03
Trim11Q99PQ2 Snord43-201ENSMUST00000199549 108 ntBASIC2.36□□□□□ -2.03
Trim11Q99PQ2 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.36□□□□□ -2.03
Trim11Q99PQ2 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trim11Q99PQ2 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Trim11Q99PQ2 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.35□□□□□ -2.03
Trim11Q99PQ2 Gm25014-201ENSMUST00000158401 103 ntBASIC2.35□□□□□ -2.03
Trim11Q99PQ2 Gm23342-201ENSMUST00000158958 115 ntBASIC2.35□□□□□ -2.03
Trim11Q99PQ2 Gm16539-201ENSMUST00000160086 327 ntBASIC2.35□□□□□ -2.03
Trim11Q99PQ2 Gm25994-201ENSMUST00000175392 101 ntBASIC2.35□□□□□ -2.03
Trim11Q99PQ2 Mir6369-201ENSMUST00000183772 106 ntBASIC2.35□□□□□ -2.03
Trim11Q99PQ2 Mir7016-201ENSMUST00000184308 72 ntBASIC2.35□□□□□ -2.03
Trim11Q99PQ2 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.35□□□□□ -2.03
Trim11Q99PQ2 Gm25038-201ENSMUST00000082928 130 ntBASIC2.35□□□□□ -2.03
Trim11Q99PQ2 Gm22884-201ENSMUST00000083127 140 ntBASIC2.35□□□□□ -2.03
Trim11Q99PQ2 Mir151-201ENSMUST00000083678 68 ntBASIC2.35□□□□□ -2.03
Trim11Q99PQ2 Gm22494-201ENSMUST00000104495 128 ntBASIC2.34□□□□□ -2.03
Trim11Q99PQ2 Gm11966-201ENSMUST00000119907 87 ntBASIC2.34□□□□□ -2.03
Trim11Q99PQ2 Gm23469-201ENSMUST00000157131 104 ntBASIC2.34□□□□□ -2.03
Trim11Q99PQ2 Gm24399-201ENSMUST00000157869 74 ntBASIC2.34□□□□□ -2.03
Trim11Q99PQ2 Gm26290-201ENSMUST00000158891 145 ntBASIC2.34□□□□□ -2.03
Trim11Q99PQ2 Gm25949-201ENSMUST00000175333 114 ntBASIC2.34□□□□□ -2.03
Trim11Q99PQ2 Gm27399-201ENSMUST00000184250 78 ntBASIC2.34□□□□□ -2.03
Trim11Q99PQ2 Gm20118-201ENSMUST00000187207 162 ntBASIC2.34□□□□□ -2.03
Trim11Q99PQ2 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC2.34□□□□□ -2.03
Trim11Q99PQ2 Mir107-201ENSMUST00000083660 87 ntBASIC2.34□□□□□ -2.03
Trim11Q99PQ2 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trim11Q99PQ2 Gm25992-201ENSMUST00000102437 109 ntBASIC2.33□□□□□ -2.04
Trim11Q99PQ2 Mir1195-201ENSMUST00000116818 98 ntBASIC2.33□□□□□ -2.04
Trim11Q99PQ2 Gm25160-201ENSMUST00000158914 102 ntBASIC2.33□□□□□ -2.04
Trim11Q99PQ2 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trim11Q99PQ2 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trim11Q99PQ2 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.32□□□□□ -2.04
Trim11Q99PQ2 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trim11Q99PQ2 Gm25168-201ENSMUST00000104189 132 ntBASIC2.32□□□□□ -2.04
Trim11Q99PQ2 Gm22674-201ENSMUST00000104413 131 ntBASIC2.32□□□□□ -2.04
Trim11Q99PQ2 Gm24396-201ENSMUST00000116905 93 ntBASIC2.32□□□□□ -2.04
Trim11Q99PQ2 Mir1949-201ENSMUST00000157434 141 ntBASIC2.32□□□□□ -2.04
Trim11Q99PQ2 Gm27979-201ENSMUST00000185126 56 ntBASIC2.32□□□□□ -2.04
Trim11Q99PQ2 Gm43038-201ENSMUST00000202359 88 ntBASIC2.32□□□□□ -2.04
Trim11Q99PQ2 Snora3-201ENSMUST00000083082 132 ntBASIC2.32□□□□□ -2.04
Trim11Q99PQ2 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trim11Q99PQ2 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.31□□□□□ -2.04
Trim11Q99PQ2 Gm24098-201ENSMUST00000102075 109 ntBASIC2.31□□□□□ -2.04
Trim11Q99PQ2 Gm25381-201ENSMUST00000102078 109 ntBASIC2.31□□□□□ -2.04
Trim11Q99PQ2 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.31□□□□□ -2.04
Trim11Q99PQ2 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.31□□□□□ -2.04
Trim11Q99PQ2 Gm25113-201ENSMUST00000157185 143 ntBASIC2.31□□□□□ -2.04
Trim11Q99PQ2 Gm23391-201ENSMUST00000157579 104 ntBASIC2.31□□□□□ -2.04
Trim11Q99PQ2 Gm20477-201ENSMUST00000174028 280 ntBASIC2.31□□□□□ -2.04
Trim11Q99PQ2 Gm44477-201ENSMUST00000199661 110 ntBASIC2.31□□□□□ -2.04
Trim11Q99PQ2 Mir221-201ENSMUST00000083488 95 ntBASIC2.31□□□□□ -2.04
Trim11Q99PQ2 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Trim11Q99PQ2 Gm25094-201ENSMUST00000103992 131 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms