Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Mir489-201ENSMUST00000093599 107 ntBASIC0.04□□□□□ -2.4
Cdk5rap3Q99LM2 Gm25718-201ENSMUST00000158632 118 ntBASIC0.03□□□□□ -2.4
Cdk5rap3Q99LM2 Gm24761-201ENSMUST00000179589 127 ntBASIC0.03□□□□□ -2.4
Cdk5rap3Q99LM2 Mir8107-201ENSMUST00000184024 117 ntBASIC0.03□□□□□ -2.4
Cdk5rap3Q99LM2 Gm37586-201ENSMUST00000193654 204 ntBASIC0.03□□□□□ -2.4
Cdk5rap3Q99LM2 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.03□□□□□ -2.4
Cdk5rap3Q99LM2 Gm25703-201ENSMUST00000083123 151 ntBASIC0.03□□□□□ -2.4
Cdk5rap3Q99LM2 Mir1197-201ENSMUST00000117037 120 ntBASIC0.02□□□□□ -2.41
Cdk5rap3Q99LM2 Gm24238-201ENSMUST00000157792 98 ntBASIC0.02□□□□□ -2.41
Cdk5rap3Q99LM2 Gm29535-201ENSMUST00000185723 109 ntBASIC0.02□□□□□ -2.41
Cdk5rap3Q99LM2 Gm28143-201ENSMUST00000191082 109 ntBASIC0.02□□□□□ -2.41
Cdk5rap3Q99LM2 Gm37116-201ENSMUST00000195161 147 ntBASIC0.02□□□□□ -2.41
Cdk5rap3Q99LM2 Gm24208-201ENSMUST00000082783 135 ntBASIC0.02□□□□□ -2.41
Cdk5rap3Q99LM2 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.02□□□□□ -2.41
Cdk5rap3Q99LM2 Gm25408-201ENSMUST00000104104 133 ntBASIC0.01□□□□□ -2.41
Cdk5rap3Q99LM2 Gm14626-201ENSMUST00000117619 216 ntBASIC0.01□□□□□ -2.41
Cdk5rap3Q99LM2 Gm11936-201ENSMUST00000118323 160 ntBASIC0.01□□□□□ -2.41
Cdk5rap3Q99LM2 Gm25654-201ENSMUST00000158467 88 ntBASIC0.01□□□□□ -2.41
Cdk5rap3Q99LM2 Gm25693-201ENSMUST00000175443 85 ntBASIC0.01□□□□□ -2.41
Cdk5rap3Q99LM2 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.01□□□□□ -2.41
Cdk5rap3Q99LM2 Gm5002-201ENSMUST00000207145 223 ntBASIC0.01□□□□□ -2.41
Cdk5rap3Q99LM2 Gm12469-201ENSMUST00000117623 207 ntBASIC0□□□□□ -2.41
Cdk5rap3Q99LM2 Gm22541-201ENSMUST00000158165 127 ntBASIC0□□□□□ -2.41
Cdk5rap3Q99LM2 Mir7657-201ENSMUST00000196051 57 ntBASIC0□□□□□ -2.41
Cdk5rap3Q99LM2 Mir3967-201ENSMUST00000198710 68 ntBASIC0□□□□□ -2.41
Cdk5rap3Q99LM2 Mir1949-202ENSMUST00000199259 70 ntBASIC0□□□□□ -2.41
Cdk5rap3Q99LM2 AC122320.1-201ENSMUST00000227233 105 ntBASIC0□□□□□ -2.41
Cdk5rap3Q99LM2 Gm22612-201ENSMUST00000158293 101 ntBASIC-0.01□□□□□ -2.41
Cdk5rap3Q99LM2 Gm25633-201ENSMUST00000178565 107 ntBASIC-0.01□□□□□ -2.41
Cdk5rap3Q99LM2 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.02□□□□□ -2.41
Cdk5rap3Q99LM2 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.02□□□□□ -2.41
Cdk5rap3Q99LM2 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.02□□□□□ -2.41
Cdk5rap3Q99LM2 Gm23545-201ENSMUST00000158205 104 ntBASIC-0.02□□□□□ -2.41
Cdk5rap3Q99LM2 Gm23003-201ENSMUST00000179948 107 ntBASIC-0.02□□□□□ -2.41
Cdk5rap3Q99LM2 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.03□□□□□ -2.41
Cdk5rap3Q99LM2 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC-0.03□□□□□ -2.41
Cdk5rap3Q99LM2 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.03□□□□□ -2.41
Cdk5rap3Q99LM2 Gm23141-201ENSMUST00000178682 94 ntBASIC-0.03□□□□□ -2.41
Cdk5rap3Q99LM2 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.03□□□□□ -2.41
Cdk5rap3Q99LM2 Mir6905-201ENSMUST00000184228 70 ntBASIC-0.03□□□□□ -2.41
Cdk5rap3Q99LM2 Mir6896-201ENSMUST00000198033 73 ntBASIC-0.03□□□□□ -2.41
Cdk5rap3Q99LM2 Snord82-201ENSMUST00000082889 70 ntBASIC-0.03□□□□□ -2.41
Cdk5rap3Q99LM2 Mir201-201ENSMUST00000083470 66 ntBASIC-0.03□□□□□ -2.41
Cdk5rap3Q99LM2 Gm25749-201ENSMUST00000175485 111 ntBASIC-0.04□□□□□ -2.42
Cdk5rap3Q99LM2 Mir3969-201ENSMUST00000197106 92 ntBASIC-0.04□□□□□ -2.42
Cdk5rap3Q99LM2 AC136457.1-201ENSMUST00000224195 156 ntBASIC-0.04□□□□□ -2.42
Cdk5rap3Q99LM2 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.04□□□□□ -2.42
Cdk5rap3Q99LM2 Gm23772-201ENSMUST00000104433 102 ntBASIC-0.05□□□□□ -2.42
Cdk5rap3Q99LM2 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.05□□□□□ -2.42
Cdk5rap3Q99LM2 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.05□□□□□ -2.42
Cdk5rap3Q99LM2 AL606472.1-201ENSMUST00000224628 275 ntBASIC-0.05□□□□□ -2.42
Cdk5rap3Q99LM2 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.06□□□□□ -2.42
Cdk5rap3Q99LM2 Gm27980-201ENSMUST00000184094 169 ntBASIC-0.06□□□□□ -2.42
Cdk5rap3Q99LM2 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-0.06□□□□□ -2.42
Cdk5rap3Q99LM2 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-0.06□□□□□ -2.42
Cdk5rap3Q99LM2 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-0.06□□□□□ -2.42
Cdk5rap3Q99LM2 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-0.06□□□□□ -2.42
Cdk5rap3Q99LM2 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-0.06□□□□□ -2.42
Cdk5rap3Q99LM2 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-0.06□□□□□ -2.42
Cdk5rap3Q99LM2 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-0.06□□□□□ -2.42
Cdk5rap3Q99LM2 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-0.06□□□□□ -2.42
Cdk5rap3Q99LM2 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-0.06□□□□□ -2.42
Cdk5rap3Q99LM2 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-0.06□□□□□ -2.42
Cdk5rap3Q99LM2 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.06□□□□□ -2.42
Cdk5rap3Q99LM2 Gm44345-201ENSMUST00000199560 135 ntBASIC-0.06□□□□□ -2.42
Cdk5rap3Q99LM2 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.06□□□□□ -2.42
Cdk5rap3Q99LM2 AC154245.1-201ENSMUST00000224615 601 ntBASIC-0.06□□□□□ -2.42
Cdk5rap3Q99LM2 Mir196a-2-201ENSMUST00000083554 85 ntBASIC-0.06□□□□□ -2.42
Cdk5rap3Q99LM2 Mir200b-201ENSMUST00000083615 70 ntBASIC-0.06□□□□□ -2.42
Cdk5rap3Q99LM2 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.07□□□□□ -2.42
Cdk5rap3Q99LM2 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.07□□□□□ -2.42
Cdk5rap3Q99LM2 Gm24772-201ENSMUST00000158507 110 ntBASIC-0.08□□□□□ -2.42
Cdk5rap3Q99LM2 Gm24225-201ENSMUST00000158825 98 ntBASIC-0.08□□□□□ -2.42
Cdk5rap3Q99LM2 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.08□□□□□ -2.42
Cdk5rap3Q99LM2 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.08□□□□□ -2.42
Cdk5rap3Q99LM2 Gm25390-201ENSMUST00000157341 103 ntBASIC-0.09□□□□□ -2.42
Cdk5rap3Q99LM2 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.09□□□□□ -2.42
Cdk5rap3Q99LM2 Gm27446-201ENSMUST00000183963 89 ntBASIC-0.09□□□□□ -2.42
Cdk5rap3Q99LM2 Mir8116-201ENSMUST00000184134 97 ntBASIC-0.09□□□□□ -2.42
Cdk5rap3Q99LM2 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.09□□□□□ -2.42
Cdk5rap3Q99LM2 Mir382-201ENSMUST00000083494 76 ntBASIC-0.09□□□□□ -2.42
Cdk5rap3Q99LM2 AC153646.2-201ENSMUST00000220516 109 ntBASIC-0.1□□□□□ -2.43
Cdk5rap3Q99LM2 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.1□□□□□ -2.43
Cdk5rap3Q99LM2 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.1□□□□□ -2.43
Cdk5rap3Q99LM2 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.12□□□□□ -2.43
Cdk5rap3Q99LM2 Gm23080-201ENSMUST00000157846 103 ntBASIC-0.12□□□□□ -2.43
Cdk5rap3Q99LM2 Gm25329-201ENSMUST00000158041 126 ntBASIC-0.12□□□□□ -2.43
Cdk5rap3Q99LM2 Gm27934-201ENSMUST00000158795 63 ntBASIC-0.12□□□□□ -2.43
Cdk5rap3Q99LM2 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.12□□□□□ -2.43
Cdk5rap3Q99LM2 Snora75-201ENSMUST00000082903 133 ntBASIC-0.12□□□□□ -2.43
Cdk5rap3Q99LM2 Snord85-201ENSMUST00000083262 73 ntBASIC-0.12□□□□□ -2.43
Cdk5rap3Q99LM2 Mir18-201ENSMUST00000083469 96 ntBASIC-0.12□□□□□ -2.43
Cdk5rap3Q99LM2 Gm23060-201ENSMUST00000102345 109 ntBASIC-0.13□□□□□ -2.43
Cdk5rap3Q99LM2 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.13□□□□□ -2.43
Cdk5rap3Q99LM2 Gm24555-201ENSMUST00000104548 124 ntBASIC-0.13□□□□□ -2.43
Cdk5rap3Q99LM2 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
Cdk5rap3Q99LM2 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.13□□□□□ -2.43
Cdk5rap3Q99LM2 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.13□□□□□ -2.43
Cdk5rap3Q99LM2 Gm23859-201ENSMUST00000158383 64 ntBASIC-0.13□□□□□ -2.43
Cdk5rap3Q99LM2 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 135.8 ms