Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm25523-201ENSMUST00000178044 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm24585-201ENSMUST00000178104 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm22627-201ENSMUST00000178127 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm22912-201ENSMUST00000178242 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm24866-201ENSMUST00000178338 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm22524-201ENSMUST00000178357 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm25710-201ENSMUST00000178367 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm23575-201ENSMUST00000178406 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm24872-201ENSMUST00000178434 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm22070-201ENSMUST00000178475 107 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm22449-201ENSMUST00000178924 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm24702-201ENSMUST00000178965 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm24206-201ENSMUST00000179011 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm24528-201ENSMUST00000179164 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm22909-201ENSMUST00000179190 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm26334-201ENSMUST00000179403 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm25463-201ENSMUST00000179405 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm25742-201ENSMUST00000179530 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm25209-201ENSMUST00000179576 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm26392-201ENSMUST00000179661 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm25230-201ENSMUST00000179740 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm26434-201ENSMUST00000179778 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm25741-201ENSMUST00000179825 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm24759-201ENSMUST00000179827 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm24219-201ENSMUST00000179861 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm26230-201ENSMUST00000180141 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Snord96a-201ENSMUST00000082791 81 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm25684-201ENSMUST00000083941 107 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm23254-201ENSMUST00000097244 79 ntBASIC1.43□□□□□ -2.18
Pcdha3Q91Y16 Gm25759-201ENSMUST00000103988 129 ntBASIC1.42□□□□□ -2.18
Pcdha3Q91Y16 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.42□□□□□ -2.18
Pcdha3Q91Y16 Gm24915-201ENSMUST00000157288 78 ntBASIC1.42□□□□□ -2.18
Pcdha3Q91Y16 Gm23106-201ENSMUST00000157554 101 ntBASIC1.42□□□□□ -2.18
Pcdha3Q91Y16 Gm7258-201ENSMUST00000179317 300 ntBASIC1.42□□□□□ -2.18
Pcdha3Q91Y16 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.42□□□□□ -2.18
Pcdha3Q91Y16 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.42□□□□□ -2.18
Pcdha3Q91Y16 Gm22055-201ENSMUST00000083388 107 ntBASIC1.42□□□□□ -2.18
Pcdha3Q91Y16 Gm25889-201ENSMUST00000157775 107 ntBASIC1.41□□□□□ -2.18
Pcdha3Q91Y16 Gm16550-201ENSMUST00000162550 126 ntBASIC1.41□□□□□ -2.18
Pcdha3Q91Y16 Gm22914-201ENSMUST00000175195 77 ntBASIC1.41□□□□□ -2.18
Pcdha3Q91Y16 Snora41-201ENSMUST00000082668 132 ntBASIC1.41□□□□□ -2.18
Pcdha3Q91Y16 Gm23654-201ENSMUST00000116758 126 ntBASIC1.4□□□□□ -2.19
Pcdha3Q91Y16 Gm28862-201ENSMUST00000188246 163 ntBASIC1.4□□□□□ -2.19
Pcdha3Q91Y16 Gm23095-201ENSMUST00000083446 107 ntBASIC1.4□□□□□ -2.19
Pcdha3Q91Y16 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.4□□□□□ -2.19
Pcdha3Q91Y16 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Pcdha3Q91Y16 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.39□□□□□ -2.19
Pcdha3Q91Y16 Gm25444-201ENSMUST00000158999 113 ntBASIC1.39□□□□□ -2.19
Pcdha3Q91Y16 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.39□□□□□ -2.19
Pcdha3Q91Y16 Gm24494-201ENSMUST00000083804 81 ntBASIC1.39□□□□□ -2.19
Pcdha3Q91Y16 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.38□□□□□ -2.19
Pcdha3Q91Y16 Gm22785-201ENSMUST00000104087 132 ntBASIC1.38□□□□□ -2.19
Pcdha3Q91Y16 Gm14923-201ENSMUST00000118270 155 ntBASIC1.38□□□□□ -2.19
Pcdha3Q91Y16 Traj61-201ENSMUST00000165025 72 ntBASIC1.38□□□□□ -2.19
Pcdha3Q91Y16 Traj60-201ENSMUST00000167781 54 ntBASIC1.38□□□□□ -2.19
Pcdha3Q91Y16 Gm22638-201ENSMUST00000179674 107 ntBASIC1.38□□□□□ -2.19
Pcdha3Q91Y16 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.38□□□□□ -2.19
Pcdha3Q91Y16 Gm45429-201ENSMUST00000209527 172 ntBASIC1.38□□□□□ -2.19
Pcdha3Q91Y16 AC124687.1-201ENSMUST00000221868 189 ntBASIC1.38□□□□□ -2.19
Pcdha3Q91Y16 Gm25650-201ENSMUST00000083784 162 ntBASIC1.38□□□□□ -2.19
Pcdha3Q91Y16 Gm24509-201ENSMUST00000157086 101 ntBASIC1.37□□□□□ -2.19
Pcdha3Q91Y16 Gm22490-201ENSMUST00000157188 119 ntBASIC1.37□□□□□ -2.19
Pcdha3Q91Y16 Gm25358-201ENSMUST00000157189 101 ntBASIC1.37□□□□□ -2.19
Pcdha3Q91Y16 Gm25329-201ENSMUST00000158041 126 ntBASIC1.37□□□□□ -2.19
Pcdha3Q91Y16 Gm23838-201ENSMUST00000158067 162 ntBASIC1.37□□□□□ -2.19
Pcdha3Q91Y16 Gm22862-201ENSMUST00000178593 121 ntBASIC1.37□□□□□ -2.19
Pcdha3Q91Y16 Gm27365-201ENSMUST00000184041 177 ntBASIC1.37□□□□□ -2.19
Pcdha3Q91Y16 Gm43324-201ENSMUST00000197482 289 ntBASIC1.37□□□□□ -2.19
Pcdha3Q91Y16 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.37□□□□□ -2.19
Pcdha3Q91Y16 Gm15654-201ENSMUST00000152660 300 ntBASIC1.36□□□□□ -2.19
Pcdha3Q91Y16 Gm23644-201ENSMUST00000157856 77 ntBASIC1.36□□□□□ -2.19
Pcdha3Q91Y16 Gm25978-201ENSMUST00000158698 90 ntBASIC1.36□□□□□ -2.19
Pcdha3Q91Y16 Gm28270-201ENSMUST00000188550 109 ntBASIC1.36□□□□□ -2.19
Pcdha3Q91Y16 Gm28328-201ENSMUST00000188869 109 ntBASIC1.36□□□□□ -2.19
Pcdha3Q91Y16 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.36□□□□□ -2.19
Pcdha3Q91Y16 Gm23507-201ENSMUST00000083078 107 ntBASIC1.36□□□□□ -2.19
Pcdha3Q91Y16 Gm25495-201ENSMUST00000104431 131 ntBASIC1.35□□□□□ -2.19
Pcdha3Q91Y16 Gm22772-201ENSMUST00000104451 121 ntBASIC1.35□□□□□ -2.19
Pcdha3Q91Y16 Gm22031-201ENSMUST00000116945 126 ntBASIC1.35□□□□□ -2.19
Pcdha3Q91Y16 Gm23336-201ENSMUST00000117023 123 ntBASIC1.35□□□□□ -2.19
Pcdha3Q91Y16 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.35□□□□□ -2.19
Pcdha3Q91Y16 Gm22213-201ENSMUST00000157564 119 ntBASIC1.35□□□□□ -2.19
Pcdha3Q91Y16 Gm25663-201ENSMUST00000157698 135 ntBASIC1.35□□□□□ -2.19
Pcdha3Q91Y16 Gm16307-201ENSMUST00000161269 210 ntBASIC1.35□□□□□ -2.19
Pcdha3Q91Y16 Gm25678-201ENSMUST00000174984 73 ntBASIC1.35□□□□□ -2.19
Pcdha3Q91Y16 Gm42935-201ENSMUST00000202004 151 ntBASIC1.35□□□□□ -2.19
Pcdha3Q91Y16 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Pcdha3Q91Y16 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Pcdha3Q91Y16 Gm26081-201ENSMUST00000104068 132 ntBASIC1.34□□□□□ -2.19
Pcdha3Q91Y16 Mir211-201ENSMUST00000083651 106 ntBASIC1.34□□□□□ -2.19
Pcdha3Q91Y16 Gm24588-201ENSMUST00000116696 83 ntBASIC1.33□□□□□ -2.2
Pcdha3Q91Y16 Gm22559-201ENSMUST00000157329 134 ntBASIC1.33□□□□□ -2.2
Pcdha3Q91Y16 Gm23267-201ENSMUST00000178490 132 ntBASIC1.33□□□□□ -2.2
Pcdha3Q91Y16 Mir6369-201ENSMUST00000183772 106 ntBASIC1.33□□□□□ -2.2
Pcdha3Q91Y16 Mir532-201ENSMUST00000093630 96 ntBASIC1.33□□□□□ -2.2
Pcdha3Q91Y16 Gm24468-201ENSMUST00000104489 104 ntBASIC1.32□□□□□ -2.2
Pcdha3Q91Y16 Gm11248-201ENSMUST00000119568 201 ntBASIC1.32□□□□□ -2.2
Pcdha3Q91Y16 Gm24649-201ENSMUST00000157106 134 ntBASIC1.32□□□□□ -2.2
Pcdha3Q91Y16 Gm23763-201ENSMUST00000158345 60 ntBASIC1.32□□□□□ -2.2
Pcdha3Q91Y16 Gm23197-201ENSMUST00000158809 112 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 145.2 ms