Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm26236-201ENSMUST00000175536 137 ntBASIC0.66□□□□□ -2.3
Nup88Q8CEC0 Gm36956-201ENSMUST00000193830 214 ntBASIC0.66□□□□□ -2.3
Nup88Q8CEC0 Gm5002-201ENSMUST00000207145 223 ntBASIC0.66□□□□□ -2.3
Nup88Q8CEC0 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.66□□□□□ -2.3
Nup88Q8CEC0 Gm26204-201ENSMUST00000082906 107 ntBASIC0.66□□□□□ -2.3
Nup88Q8CEC0 Gm23461-201ENSMUST00000083265 107 ntBASIC0.66□□□□□ -2.3
Nup88Q8CEC0 Gm27934-201ENSMUST00000158795 63 ntBASIC0.65□□□□□ -2.31
Nup88Q8CEC0 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.65□□□□□ -2.31
Nup88Q8CEC0 Gm25444-201ENSMUST00000158999 113 ntBASIC0.65□□□□□ -2.31
Nup88Q8CEC0 Gm26285-201ENSMUST00000177923 107 ntBASIC0.65□□□□□ -2.31
Nup88Q8CEC0 Gm27289-201ENSMUST00000183341 82 ntBASIC0.65□□□□□ -2.31
Nup88Q8CEC0 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Nup88Q8CEC0 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.65□□□□□ -2.31
Nup88Q8CEC0 Gm23622-201ENSMUST00000082460 107 ntBASIC0.65□□□□□ -2.31
Nup88Q8CEC0 Gm22302-201ENSMUST00000082657 106 ntBASIC0.65□□□□□ -2.31
Nup88Q8CEC0 Mir216a-201ENSMUST00000083605 72 ntBASIC0.65□□□□□ -2.31
Nup88Q8CEC0 Mir488-201ENSMUST00000093595 109 ntBASIC0.65□□□□□ -2.31
Nup88Q8CEC0 Mir471-201ENSMUST00000093596 67 ntBASIC0.65□□□□□ -2.31
Nup88Q8CEC0 Gm27694-201ENSMUST00000184740 86 ntBASIC0.64□□□□□ -2.31
Nup88Q8CEC0 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.64□□□□□ -2.31
Nup88Q8CEC0 Gm22753-201ENSMUST00000083657 107 ntBASIC0.64□□□□□ -2.31
Nup88Q8CEC0 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Nup88Q8CEC0 Snord69-201ENSMUST00000104024 80 ntBASIC0.63□□□□□ -2.31
Nup88Q8CEC0 Scarna9-201ENSMUST00000104318 70 ntBASIC0.63□□□□□ -2.31
Nup88Q8CEC0 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.63□□□□□ -2.31
Nup88Q8CEC0 Gm24575-201ENSMUST00000175502 77 ntBASIC0.63□□□□□ -2.31
Nup88Q8CEC0 Gm27607-201ENSMUST00000185162 122 ntBASIC0.63□□□□□ -2.31
Nup88Q8CEC0 Gm28767-201ENSMUST00000188601 114 ntBASIC0.63□□□□□ -2.31
Nup88Q8CEC0 Gm37746-201ENSMUST00000193249 198 ntBASIC0.63□□□□□ -2.31
Nup88Q8CEC0 Gm8508-201ENSMUST00000061226 363 ntBASIC0.63□□□□□ -2.31
Nup88Q8CEC0 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Nup88Q8CEC0 Mir489-201ENSMUST00000093599 107 ntBASIC0.63□□□□□ -2.31
Nup88Q8CEC0 Gm14039-201ENSMUST00000118705 101 ntBASIC0.62□□□□□ -2.31
Nup88Q8CEC0 Gm15654-201ENSMUST00000152660 300 ntBASIC0.62□□□□□ -2.31
Nup88Q8CEC0 Gm25375-201ENSMUST00000158157 135 ntBASIC0.62□□□□□ -2.31
Nup88Q8CEC0 Mir30f-201ENSMUST00000196073 92 ntBASIC0.62□□□□□ -2.31
Nup88Q8CEC0 Gm44922-201ENSMUST00000206690 90 ntBASIC0.62□□□□□ -2.31
Nup88Q8CEC0 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.62□□□□□ -2.31
Nup88Q8CEC0 Gm25814-201ENSMUST00000082754 107 ntBASIC0.62□□□□□ -2.31
Nup88Q8CEC0 Gm25610-201ENSMUST00000104016 129 ntBASIC0.61□□□□□ -2.31
Nup88Q8CEC0 Gm14946-201ENSMUST00000119859 296 ntBASIC0.61□□□□□ -2.31
Nup88Q8CEC0 Gm6985-201ENSMUST00000121255 271 ntBASIC0.61□□□□□ -2.31
Nup88Q8CEC0 Gm22522-201ENSMUST00000158271 151 ntBASIC0.61□□□□□ -2.31
Nup88Q8CEC0 Mir6389-201ENSMUST00000183661 102 ntBASIC0.61□□□□□ -2.31
Nup88Q8CEC0 Gm44807-201ENSMUST00000206115 154 ntBASIC0.61□□□□□ -2.31
Nup88Q8CEC0 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC0.61□□□□□ -2.31
Nup88Q8CEC0 Gm24476-201ENSMUST00000157437 131 ntBASIC0.6□□□□□ -2.31
Nup88Q8CEC0 Gm26403-201ENSMUST00000158500 105 ntBASIC0.6□□□□□ -2.31
Nup88Q8CEC0 Gm18665-201ENSMUST00000189783 270 ntBASIC0.6□□□□□ -2.31
Nup88Q8CEC0 Gm43432-201ENSMUST00000196352 121 ntBASIC0.6□□□□□ -2.31
Nup88Q8CEC0 Mir3969-201ENSMUST00000197106 92 ntBASIC0.6□□□□□ -2.31
Nup88Q8CEC0 Gm43381-201ENSMUST00000198553 165 ntBASIC0.6□□□□□ -2.31
Nup88Q8CEC0 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.6□□□□□ -2.31
Nup88Q8CEC0 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.6□□□□□ -2.31
Nup88Q8CEC0 Gm14884-201ENSMUST00000120456 196 ntBASIC0.59□□□□□ -2.31
Nup88Q8CEC0 Gm24238-201ENSMUST00000157792 98 ntBASIC0.59□□□□□ -2.31
Nup88Q8CEC0 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
Nup88Q8CEC0 Gm22348-201ENSMUST00000178674 79 ntBASIC0.59□□□□□ -2.31
Nup88Q8CEC0 Gm24030-201ENSMUST00000083931 164 ntBASIC0.59□□□□□ -2.31
Nup88Q8CEC0 Gm24232-201ENSMUST00000104314 132 ntBASIC0.58□□□□□ -2.32
Nup88Q8CEC0 Gm15289-201ENSMUST00000117793 244 ntBASIC0.58□□□□□ -2.32
Nup88Q8CEC0 Gm14502-201ENSMUST00000118154 113 ntBASIC0.58□□□□□ -2.32
Nup88Q8CEC0 Gm26484-201ENSMUST00000158018 106 ntBASIC0.58□□□□□ -2.32
Nup88Q8CEC0 Gm23859-201ENSMUST00000158383 64 ntBASIC0.58□□□□□ -2.32
Nup88Q8CEC0 Gm24500-201ENSMUST00000158447 124 ntBASIC0.58□□□□□ -2.32
Nup88Q8CEC0 Gm26468-201ENSMUST00000158644 106 ntBASIC0.58□□□□□ -2.32
Nup88Q8CEC0 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.58□□□□□ -2.32
Nup88Q8CEC0 Mir6369-201ENSMUST00000183772 106 ntBASIC0.58□□□□□ -2.32
Nup88Q8CEC0 Gm27446-201ENSMUST00000183963 89 ntBASIC0.58□□□□□ -2.32
Nup88Q8CEC0 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.58□□□□□ -2.32
Nup88Q8CEC0 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Nup88Q8CEC0 Snord70-201ENSMUST00000104157 87 ntBASIC0.57□□□□□ -2.32
Nup88Q8CEC0 Gm22606-201ENSMUST00000158290 103 ntBASIC0.57□□□□□ -2.32
Nup88Q8CEC0 Gm23852-201ENSMUST00000158376 77 ntBASIC0.57□□□□□ -2.32
Nup88Q8CEC0 Mir7657-201ENSMUST00000196051 57 ntBASIC0.57□□□□□ -2.32
Nup88Q8CEC0 Gm42623-201ENSMUST00000197225 379 ntBASIC0.57□□□□□ -2.32
Nup88Q8CEC0 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Nup88Q8CEC0 Mir1298-201ENSMUST00000116681 98 ntBASIC0.56□□□□□ -2.32
Nup88Q8CEC0 Gm23989-201ENSMUST00000117030 66 ntBASIC0.56□□□□□ -2.32
Nup88Q8CEC0 Gm24963-201ENSMUST00000157916 144 ntBASIC0.56□□□□□ -2.32
Nup88Q8CEC0 Gm27803-201ENSMUST00000183763 119 ntBASIC0.56□□□□□ -2.32
Nup88Q8CEC0 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.56□□□□□ -2.32
Nup88Q8CEC0 Gm23301-201ENSMUST00000082713 65 ntBASIC0.56□□□□□ -2.32
Nup88Q8CEC0 Gm25497-201ENSMUST00000104425 132 ntBASIC0.55□□□□□ -2.32
Nup88Q8CEC0 Mir1899-201ENSMUST00000122798 96 ntBASIC0.55□□□□□ -2.32
Nup88Q8CEC0 Gm23672-201ENSMUST00000157471 107 ntBASIC0.55□□□□□ -2.32
Nup88Q8CEC0 Gm23180-201ENSMUST00000158686 125 ntBASIC0.55□□□□□ -2.32
Nup88Q8CEC0 Mir100-201ENSMUST00000175270 80 ntBASIC0.55□□□□□ -2.32
Nup88Q8CEC0 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.55□□□□□ -2.32
Nup88Q8CEC0 Mir21b-201ENSMUST00000184317 108 ntBASIC0.55□□□□□ -2.32
Nup88Q8CEC0 Mir466h-201ENSMUST00000104748 81 ntBASIC0.54□□□□□ -2.32
Nup88Q8CEC0 Gm22105-201ENSMUST00000116734 116 ntBASIC0.54□□□□□ -2.32
Nup88Q8CEC0 Gm22621-201ENSMUST00000179678 74 ntBASIC0.54□□□□□ -2.32
Nup88Q8CEC0 Gm27993-201ENSMUST00000184362 85 ntBASIC0.54□□□□□ -2.32
Nup88Q8CEC0 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.53□□□□□ -2.32
Nup88Q8CEC0 Mir669f-201ENSMUST00000103850 121 ntBASIC0.53□□□□□ -2.32
Nup88Q8CEC0 Gm26097-201ENSMUST00000179642 93 ntBASIC0.53□□□□□ -2.32
Nup88Q8CEC0 Gm27980-201ENSMUST00000184094 169 ntBASIC0.53□□□□□ -2.32
Nup88Q8CEC0 Gm44828-201ENSMUST00000203745 106 ntBASIC0.53□□□□□ -2.32
Nup88Q8CEC0 Gm24457-201ENSMUST00000083196 105 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 140.7 ms