Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm22515-201ENSMUST00000158273 305 ntBASIC0.97□□□□□ -2.25
Atg4aQ8C9S8 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.97□□□□□ -2.25
Atg4aQ8C9S8 Gm45492-201ENSMUST00000211611 288 ntBASIC0.97□□□□□ -2.25
Atg4aQ8C9S8 Gm24616-201ENSMUST00000083274 139 ntBASIC0.97□□□□□ -2.25
Atg4aQ8C9S8 Gm22689-201ENSMUST00000102452 110 ntBASIC0.96□□□□□ -2.26
Atg4aQ8C9S8 Gm22966-201ENSMUST00000157957 129 ntBASIC0.96□□□□□ -2.26
Atg4aQ8C9S8 Gm26291-201ENSMUST00000158889 137 ntBASIC0.96□□□□□ -2.26
Atg4aQ8C9S8 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Atg4aQ8C9S8 Gm24311-201ENSMUST00000082570 104 ntBASIC0.96□□□□□ -2.26
Atg4aQ8C9S8 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Atg4aQ8C9S8 Gm26091-201ENSMUST00000122704 82 ntBASIC0.95□□□□□ -2.26
Atg4aQ8C9S8 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.95□□□□□ -2.26
Atg4aQ8C9S8 Gm26084-201ENSMUST00000157903 104 ntBASIC0.95□□□□□ -2.26
Atg4aQ8C9S8 Gm24221-201ENSMUST00000158833 313 ntBASIC0.95□□□□□ -2.26
Atg4aQ8C9S8 Gm22801-201ENSMUST00000175624 84 ntBASIC0.95□□□□□ -2.26
Atg4aQ8C9S8 Gm23651-201ENSMUST00000116755 120 ntBASIC0.94□□□□□ -2.26
Atg4aQ8C9S8 Gm15654-201ENSMUST00000152660 300 ntBASIC0.94□□□□□ -2.26
Atg4aQ8C9S8 Gm24718-201ENSMUST00000157521 136 ntBASIC0.94□□□□□ -2.26
Atg4aQ8C9S8 Gm23260-201ENSMUST00000158317 172 ntBASIC0.94□□□□□ -2.26
Atg4aQ8C9S8 Gm22775-201ENSMUST00000177630 120 ntBASIC0.94□□□□□ -2.26
Atg4aQ8C9S8 Gm23922-201ENSMUST00000178792 79 ntBASIC0.94□□□□□ -2.26
Atg4aQ8C9S8 Mir669j-201ENSMUST00000179023 121 ntBASIC0.94□□□□□ -2.26
Atg4aQ8C9S8 Gm24657-201ENSMUST00000180085 79 ntBASIC0.94□□□□□ -2.26
Atg4aQ8C9S8 Gm23569-201ENSMUST00000180120 120 ntBASIC0.94□□□□□ -2.26
Atg4aQ8C9S8 Gm22996-201ENSMUST00000180236 79 ntBASIC0.94□□□□□ -2.26
Atg4aQ8C9S8 Gm22681-201ENSMUST00000083853 106 ntBASIC0.94□□□□□ -2.26
Atg4aQ8C9S8 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Atg4aQ8C9S8 Gm14039-201ENSMUST00000118705 101 ntBASIC0.93□□□□□ -2.26
Atg4aQ8C9S8 Gm24547-201ENSMUST00000158649 149 ntBASIC0.93□□□□□ -2.26
Atg4aQ8C9S8 Mir6369-201ENSMUST00000183772 106 ntBASIC0.93□□□□□ -2.26
Atg4aQ8C9S8 Gm27668-201ENSMUST00000184188 120 ntBASIC0.93□□□□□ -2.26
Atg4aQ8C9S8 Mir6240-201ENSMUST00000184281 117 ntBASIC0.93□□□□□ -2.26
Atg4aQ8C9S8 Mir7657-201ENSMUST00000196051 57 ntBASIC0.93□□□□□ -2.26
Atg4aQ8C9S8 Gm25820-201ENSMUST00000198589 127 ntBASIC0.93□□□□□ -2.26
Atg4aQ8C9S8 Gm23735-201ENSMUST00000082551 134 ntBASIC0.93□□□□□ -2.26
Atg4aQ8C9S8 Gm25814-201ENSMUST00000082754 107 ntBASIC0.93□□□□□ -2.26
Atg4aQ8C9S8 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Atg4aQ8C9S8 Gm14626-201ENSMUST00000117619 216 ntBASIC0.92□□□□□ -2.26
Atg4aQ8C9S8 Gm12432-201ENSMUST00000119540 186 ntBASIC0.92□□□□□ -2.26
Atg4aQ8C9S8 Gm26274-201ENSMUST00000157103 321 ntBASIC0.92□□□□□ -2.26
Atg4aQ8C9S8 Gm24728-201ENSMUST00000158226 125 ntBASIC0.92□□□□□ -2.26
Atg4aQ8C9S8 Gm23350-201ENSMUST00000158429 103 ntBASIC0.92□□□□□ -2.26
Atg4aQ8C9S8 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.92□□□□□ -2.26
Atg4aQ8C9S8 Gm20118-201ENSMUST00000187207 162 ntBASIC0.92□□□□□ -2.26
Atg4aQ8C9S8 Gm42533-201ENSMUST00000196247 157 ntBASIC0.92□□□□□ -2.26
Atg4aQ8C9S8 Gm24449-201ENSMUST00000083985 106 ntBASIC0.92□□□□□ -2.26
Atg4aQ8C9S8 Gm24246-201ENSMUST00000157315 132 ntBASIC0.91□□□□□ -2.26
Atg4aQ8C9S8 Gm28767-201ENSMUST00000188601 114 ntBASIC0.91□□□□□ -2.26
Atg4aQ8C9S8 Mir30f-201ENSMUST00000196073 92 ntBASIC0.91□□□□□ -2.26
Atg4aQ8C9S8 Gm26301-201ENSMUST00000104813 95 ntBASIC0.9□□□□□ -2.27
Atg4aQ8C9S8 Gm25968-201ENSMUST00000157167 100 ntBASIC0.9□□□□□ -2.27
Atg4aQ8C9S8 Gm23893-201ENSMUST00000158106 134 ntBASIC0.9□□□□□ -2.27
Atg4aQ8C9S8 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.9□□□□□ -2.27
Atg4aQ8C9S8 Gm38323-201ENSMUST00000192450 210 ntBASIC0.9□□□□□ -2.27
Atg4aQ8C9S8 AC164561.1-201ENSMUST00000220414 115 ntBASIC0.9□□□□□ -2.27
Atg4aQ8C9S8 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.9□□□□□ -2.27
Atg4aQ8C9S8 Gm22297-201ENSMUST00000083312 106 ntBASIC0.9□□□□□ -2.27
Atg4aQ8C9S8 Gm10351-201ENSMUST00000087694 125 ntBASIC0.9□□□□□ -2.27
Atg4aQ8C9S8 Gm25110-201ENSMUST00000116684 121 ntBASIC0.89□□□□□ -2.27
Atg4aQ8C9S8 Gm25775-201ENSMUST00000116716 121 ntBASIC0.89□□□□□ -2.27
Atg4aQ8C9S8 Gm24795-201ENSMUST00000116737 121 ntBASIC0.89□□□□□ -2.27
Atg4aQ8C9S8 Gm25171-201ENSMUST00000116926 121 ntBASIC0.89□□□□□ -2.27
Atg4aQ8C9S8 Gm10813-201ENSMUST00000099936 90 ntBASIC0.89□□□□□ -2.27
Atg4aQ8C9S8 Gm24431-201ENSMUST00000104073 66 ntBASIC0.88□□□□□ -2.27
Atg4aQ8C9S8 Scarna9-201ENSMUST00000104318 70 ntBASIC0.88□□□□□ -2.27
Atg4aQ8C9S8 Gm25329-201ENSMUST00000158041 126 ntBASIC0.88□□□□□ -2.27
Atg4aQ8C9S8 Gm26358-201ENSMUST00000158215 97 ntBASIC0.88□□□□□ -2.27
Atg4aQ8C9S8 Mir1933-201ENSMUST00000158930 88 ntBASIC0.88□□□□□ -2.27
Atg4aQ8C9S8 Gm24575-201ENSMUST00000175502 77 ntBASIC0.88□□□□□ -2.27
Atg4aQ8C9S8 Mir1954-201ENSMUST00000175595 86 ntBASIC0.88□□□□□ -2.27
Atg4aQ8C9S8 Gm24030-201ENSMUST00000083931 164 ntBASIC0.88□□□□□ -2.27
Atg4aQ8C9S8 Gm25915-201ENSMUST00000104265 126 ntBASIC0.87□□□□□ -2.27
Atg4aQ8C9S8 Gm15289-201ENSMUST00000117793 244 ntBASIC0.87□□□□□ -2.27
Atg4aQ8C9S8 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
Atg4aQ8C9S8 Mir20b-201ENSMUST00000102087 80 ntBASIC0.86□□□□□ -2.27
Atg4aQ8C9S8 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC0.86□□□□□ -2.27
Atg4aQ8C9S8 Gm24020-201ENSMUST00000180156 108 ntBASIC0.86□□□□□ -2.27
Atg4aQ8C9S8 Gm42935-201ENSMUST00000202004 151 ntBASIC0.86□□□□□ -2.27
Atg4aQ8C9S8 Mir410-201ENSMUST00000083563 81 ntBASIC0.86□□□□□ -2.27
Atg4aQ8C9S8 Gm16186-201ENSMUST00000120132 216 ntBASIC0.85□□□□□ -2.27
Atg4aQ8C9S8 Mir1899-201ENSMUST00000122798 96 ntBASIC0.85□□□□□ -2.27
Atg4aQ8C9S8 Gm22451-201ENSMUST00000122803 151 ntBASIC0.85□□□□□ -2.27
Atg4aQ8C9S8 Gm25367-201ENSMUST00000158846 106 ntBASIC0.85□□□□□ -2.27
Atg4aQ8C9S8 Gm25166-201ENSMUST00000158909 111 ntBASIC0.85□□□□□ -2.27
Atg4aQ8C9S8 Gm25444-201ENSMUST00000158999 113 ntBASIC0.85□□□□□ -2.27
Atg4aQ8C9S8 Mir3079-201ENSMUST00000175428 90 ntBASIC0.85□□□□□ -2.27
Atg4aQ8C9S8 Mir500-201ENSMUST00000093600 92 ntBASIC0.85□□□□□ -2.27
Atg4aQ8C9S8 Gm25544-201ENSMUST00000122676 120 ntBASIC0.84□□□□□ -2.27
Atg4aQ8C9S8 Gm24476-201ENSMUST00000157437 131 ntBASIC0.84□□□□□ -2.27
Atg4aQ8C9S8 Mir3109-201ENSMUST00000175301 88 ntBASIC0.84□□□□□ -2.27
Atg4aQ8C9S8 Mir6390-201ENSMUST00000184405 129 ntBASIC0.84□□□□□ -2.27
Atg4aQ8C9S8 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Atg4aQ8C9S8 Gm22384-201ENSMUST00000158187 104 ntBASIC0.83□□□□□ -2.28
Atg4aQ8C9S8 Gm24500-201ENSMUST00000158447 124 ntBASIC0.83□□□□□ -2.28
Atg4aQ8C9S8 Mir15a-201ENSMUST00000175266 84 ntBASIC0.83□□□□□ -2.28
Atg4aQ8C9S8 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Atg4aQ8C9S8 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Atg4aQ8C9S8 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Atg4aQ8C9S8 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Atg4aQ8C9S8 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.83□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms