Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Mir6951-201ENSMUST00000183910 75 ntBASIC-0.29□□□□□ -2.46
Ccdc40Q8BI79 Mir186-201ENSMUST00000083497 71 ntBASIC-0.29□□□□□ -2.46
Ccdc40Q8BI79 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.3□□□□□ -2.46
Ccdc40Q8BI79 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.3□□□□□ -2.46
Ccdc40Q8BI79 Gm44373-201ENSMUST00000196112 169 ntBASIC-0.3□□□□□ -2.46
Ccdc40Q8BI79 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.3□□□□□ -2.46
Ccdc40Q8BI79 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.31□□□□□ -2.46
Ccdc40Q8BI79 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.31□□□□□ -2.46
Ccdc40Q8BI79 Gm25720-201ENSMUST00000157503 105 ntBASIC-0.31□□□□□ -2.46
Ccdc40Q8BI79 Gm23278-201ENSMUST00000157911 143 ntBASIC-0.31□□□□□ -2.46
Ccdc40Q8BI79 Gm22332-201ENSMUST00000158072 126 ntBASIC-0.31□□□□□ -2.46
Ccdc40Q8BI79 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.31□□□□□ -2.46
Ccdc40Q8BI79 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.32□□□□□ -2.46
Ccdc40Q8BI79 Gm22557-201ENSMUST00000157804 102 ntBASIC-0.32□□□□□ -2.46
Ccdc40Q8BI79 Gm23579-201ENSMUST00000158528 103 ntBASIC-0.32□□□□□ -2.46
Ccdc40Q8BI79 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.32□□□□□ -2.46
Ccdc40Q8BI79 Trav5-2-201ENSMUST00000199855 280 ntBASIC-0.32□□□□□ -2.46
Ccdc40Q8BI79 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.32□□□□□ -2.46
Ccdc40Q8BI79 AC134601.1-201ENSMUST00000221058 109 ntBASIC-0.32□□□□□ -2.46
Ccdc40Q8BI79 mt-Tr-201ENSMUST00000082412 68 ntBASIC-0.32□□□□□ -2.46
Ccdc40Q8BI79 Gm23345-201ENSMUST00000083817 150 ntBASIC-0.32□□□□□ -2.46
Ccdc40Q8BI79 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.33□□□□□ -2.46
Ccdc40Q8BI79 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.33□□□□□ -2.46
Ccdc40Q8BI79 Gm14906-201ENSMUST00000119265 390 ntBASIC-0.33□□□□□ -2.46
Ccdc40Q8BI79 Gm22850-201ENSMUST00000157714 82 ntBASIC-0.33□□□□□ -2.46
Ccdc40Q8BI79 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.33□□□□□ -2.46
Ccdc40Q8BI79 Gm23180-201ENSMUST00000158686 125 ntBASIC-0.33□□□□□ -2.46
Ccdc40Q8BI79 Mir7657-201ENSMUST00000196051 57 ntBASIC-0.33□□□□□ -2.46
Ccdc40Q8BI79 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.33□□□□□ -2.46
Ccdc40Q8BI79 Gm23140-201ENSMUST00000082487 107 ntBASIC-0.33□□□□□ -2.46
Ccdc40Q8BI79 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.33□□□□□ -2.46
Ccdc40Q8BI79 Gm22079-201ENSMUST00000157592 106 ntBASIC-0.34□□□□□ -2.46
Ccdc40Q8BI79 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-0.34□□□□□ -2.46
Ccdc40Q8BI79 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-0.34□□□□□ -2.46
Ccdc40Q8BI79 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-0.34□□□□□ -2.46
Ccdc40Q8BI79 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-0.34□□□□□ -2.46
Ccdc40Q8BI79 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-0.34□□□□□ -2.46
Ccdc40Q8BI79 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-0.34□□□□□ -2.46
Ccdc40Q8BI79 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-0.34□□□□□ -2.46
Ccdc40Q8BI79 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-0.34□□□□□ -2.46
Ccdc40Q8BI79 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-0.34□□□□□ -2.46
Ccdc40Q8BI79 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-0.34□□□□□ -2.46
Ccdc40Q8BI79 Gm44989-201ENSMUST00000204749 217 ntBASIC-0.34□□□□□ -2.46
Ccdc40Q8BI79 AL603630.1-201ENSMUST00000214781 147 ntBASIC-0.34□□□□□ -2.46
Ccdc40Q8BI79 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.34□□□□□ -2.46
Ccdc40Q8BI79 Mir489-201ENSMUST00000093599 107 ntBASIC-0.34□□□□□ -2.46
Ccdc40Q8BI79 Gm14883-201ENSMUST00000120179 157 ntBASIC-0.35□□□□□ -2.47
Ccdc40Q8BI79 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.35□□□□□ -2.47
Ccdc40Q8BI79 Gm25362-201ENSMUST00000158854 105 ntBASIC-0.35□□□□□ -2.47
Ccdc40Q8BI79 Mir6928-201ENSMUST00000185166 70 ntBASIC-0.35□□□□□ -2.47
Ccdc40Q8BI79 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.35□□□□□ -2.47
Ccdc40Q8BI79 Snora75-201ENSMUST00000082903 133 ntBASIC-0.35□□□□□ -2.47
Ccdc40Q8BI79 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
Ccdc40Q8BI79 Mir669f-201ENSMUST00000103850 121 ntBASIC-0.36□□□□□ -2.47
Ccdc40Q8BI79 Gm28020-201ENSMUST00000157739 67 ntBASIC-0.36□□□□□ -2.47
Ccdc40Q8BI79 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.36□□□□□ -2.47
Ccdc40Q8BI79 Ighv12-2-201ENSMUST00000191949 362 ntBASIC-0.36□□□□□ -2.47
Ccdc40Q8BI79 Gm38019-201ENSMUST00000195133 380 ntBASIC-0.36□□□□□ -2.47
Ccdc40Q8BI79 Mir9-2-201ENSMUST00000083490 72 ntBASIC-0.36□□□□□ -2.47
Ccdc40Q8BI79 Mir214-201ENSMUST00000083582 110 ntBASIC-0.36□□□□□ -2.47
Ccdc40Q8BI79 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.37□□□□□ -2.47
Ccdc40Q8BI79 Mir881-201ENSMUST00000104844 78 ntBASIC-0.37□□□□□ -2.47
Ccdc40Q8BI79 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.37□□□□□ -2.47
Ccdc40Q8BI79 Gm22790-201ENSMUST00000157229 129 ntBASIC-0.37□□□□□ -2.47
Ccdc40Q8BI79 Gm28925-201ENSMUST00000188586 168 ntBASIC-0.37□□□□□ -2.47
Ccdc40Q8BI79 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.37□□□□□ -2.47
Ccdc40Q8BI79 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.37□□□□□ -2.47
Ccdc40Q8BI79 Mir466f-3-201ENSMUST00000104788 94 ntBASIC-0.38□□□□□ -2.47
Ccdc40Q8BI79 Mir669i-201ENSMUST00000117007 127 ntBASIC-0.38□□□□□ -2.47
Ccdc40Q8BI79 Gm26279-201ENSMUST00000157095 102 ntBASIC-0.38□□□□□ -2.47
Ccdc40Q8BI79 Mir191-201ENSMUST00000196210 74 ntBASIC-0.38□□□□□ -2.47
Ccdc40Q8BI79 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.38□□□□□ -2.47
Ccdc40Q8BI79 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.39□□□□□ -2.47
Ccdc40Q8BI79 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.39□□□□□ -2.47
Ccdc40Q8BI79 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.39□□□□□ -2.47
Ccdc40Q8BI79 Gm25161-201ENSMUST00000158913 132 ntBASIC-0.39□□□□□ -2.47
Ccdc40Q8BI79 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.39□□□□□ -2.47
Ccdc40Q8BI79 Gm24762-201ENSMUST00000083689 104 ntBASIC-0.39□□□□□ -2.47
Ccdc40Q8BI79 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.39□□□□□ -2.47
Ccdc40Q8BI79 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
Ccdc40Q8BI79 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.4□□□□□ -2.47
Ccdc40Q8BI79 Mir3970-201ENSMUST00000199287 90 ntBASIC-0.4□□□□□ -2.47
Ccdc40Q8BI79 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.4□□□□□ -2.47
Ccdc40Q8BI79 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC-0.41□□□□□ -2.48
Ccdc40Q8BI79 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.41□□□□□ -2.48
Ccdc40Q8BI79 Gm26360-201ENSMUST00000158872 103 ntBASIC-0.41□□□□□ -2.48
Ccdc40Q8BI79 Gm27607-201ENSMUST00000185162 122 ntBASIC-0.41□□□□□ -2.48
Ccdc40Q8BI79 Mir3969-201ENSMUST00000197106 92 ntBASIC-0.41□□□□□ -2.48
Ccdc40Q8BI79 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.41□□□□□ -2.48
Ccdc40Q8BI79 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
Ccdc40Q8BI79 Mir541-201ENSMUST00000102097 90 ntBASIC-0.42□□□□□ -2.48
Ccdc40Q8BI79 Gm6897-201ENSMUST00000117714 138 ntBASIC-0.42□□□□□ -2.48
Ccdc40Q8BI79 Gm14758-201ENSMUST00000119104 138 ntBASIC-0.42□□□□□ -2.48
Ccdc40Q8BI79 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.42□□□□□ -2.48
Ccdc40Q8BI79 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.42□□□□□ -2.48
Ccdc40Q8BI79 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.42□□□□□ -2.48
Ccdc40Q8BI79 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.42□□□□□ -2.48
Ccdc40Q8BI79 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.42□□□□□ -2.48
Ccdc40Q8BI79 mt-Ti-201ENSMUST00000082393 69 ntBASIC-0.42□□□□□ -2.48
Ccdc40Q8BI79 Gm23347-201ENSMUST00000083823 82 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 149.6 ms