Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm22801-201ENSMUST00000175624 84 ntBASIC1.15□□□□□ -2.23
Ubfd1Q78JW9 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.15□□□□□ -2.23
Ubfd1Q78JW9 Mir200b-201ENSMUST00000083615 70 ntBASIC1.15□□□□□ -2.23
Ubfd1Q78JW9 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.14□□□□□ -2.23
Ubfd1Q78JW9 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC1.14□□□□□ -2.23
Ubfd1Q78JW9 Gm26084-201ENSMUST00000157903 104 ntBASIC1.14□□□□□ -2.23
Ubfd1Q78JW9 Gm23260-201ENSMUST00000158317 172 ntBASIC1.14□□□□□ -2.23
Ubfd1Q78JW9 Gm22887-201ENSMUST00000178586 107 ntBASIC1.14□□□□□ -2.23
Ubfd1Q78JW9 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.14□□□□□ -2.23
Ubfd1Q78JW9 Gm22980-201ENSMUST00000082608 70 ntBASIC1.14□□□□□ -2.23
Ubfd1Q78JW9 Gm26091-201ENSMUST00000122704 82 ntBASIC1.13□□□□□ -2.23
Ubfd1Q78JW9 Gm24717-201ENSMUST00000157522 124 ntBASIC1.13□□□□□ -2.23
Ubfd1Q78JW9 Gm44490-201ENSMUST00000198566 127 ntBASIC1.13□□□□□ -2.23
Ubfd1Q78JW9 Gm45492-201ENSMUST00000211611 288 ntBASIC1.13□□□□□ -2.23
Ubfd1Q78JW9 Gm24616-201ENSMUST00000083274 139 ntBASIC1.13□□□□□ -2.23
Ubfd1Q78JW9 Gm15654-201ENSMUST00000152660 300 ntBASIC1.12□□□□□ -2.23
Ubfd1Q78JW9 Gm24246-201ENSMUST00000157315 132 ntBASIC1.12□□□□□ -2.23
Ubfd1Q78JW9 Gm25768-201ENSMUST00000158570 98 ntBASIC1.12□□□□□ -2.23
Ubfd1Q78JW9 Gm22775-201ENSMUST00000177630 120 ntBASIC1.12□□□□□ -2.23
Ubfd1Q78JW9 Gm23922-201ENSMUST00000178792 79 ntBASIC1.12□□□□□ -2.23
Ubfd1Q78JW9 Gm24657-201ENSMUST00000180085 79 ntBASIC1.12□□□□□ -2.23
Ubfd1Q78JW9 Gm23569-201ENSMUST00000180120 120 ntBASIC1.12□□□□□ -2.23
Ubfd1Q78JW9 Gm22996-201ENSMUST00000180236 79 ntBASIC1.12□□□□□ -2.23
Ubfd1Q78JW9 Mir6394-201ENSMUST00000184738 99 ntBASIC1.12□□□□□ -2.23
Ubfd1Q78JW9 Mir7657-201ENSMUST00000196051 57 ntBASIC1.12□□□□□ -2.23
Ubfd1Q78JW9 Gm22681-201ENSMUST00000083853 106 ntBASIC1.12□□□□□ -2.23
Ubfd1Q78JW9 Gm14626-201ENSMUST00000117619 216 ntBASIC1.11□□□□□ -2.23
Ubfd1Q78JW9 Gm24718-201ENSMUST00000157521 136 ntBASIC1.11□□□□□ -2.23
Ubfd1Q78JW9 Gm23340-201ENSMUST00000158955 123 ntBASIC1.11□□□□□ -2.23
Ubfd1Q78JW9 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Ubfd1Q78JW9 Mir6369-201ENSMUST00000183772 106 ntBASIC1.1□□□□□ -2.23
Ubfd1Q78JW9 Gm20118-201ENSMUST00000187207 162 ntBASIC1.1□□□□□ -2.23
Ubfd1Q78JW9 Mir30f-201ENSMUST00000196073 92 ntBASIC1.1□□□□□ -2.23
Ubfd1Q78JW9 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.1□□□□□ -2.23
Ubfd1Q78JW9 Gm25814-201ENSMUST00000082754 107 ntBASIC1.1□□□□□ -2.23
Ubfd1Q78JW9 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Ubfd1Q78JW9 Gm23651-201ENSMUST00000116755 120 ntBASIC1.09□□□□□ -2.23
Ubfd1Q78JW9 Gm14039-201ENSMUST00000118705 101 ntBASIC1.09□□□□□ -2.23
Ubfd1Q78JW9 Gm22485-201ENSMUST00000157990 109 ntBASIC1.09□□□□□ -2.23
Ubfd1Q78JW9 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.09□□□□□ -2.23
Ubfd1Q78JW9 Gm42533-201ENSMUST00000196247 157 ntBASIC1.09□□□□□ -2.23
Ubfd1Q78JW9 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.09□□□□□ -2.23
Ubfd1Q78JW9 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.09□□□□□ -2.23
Ubfd1Q78JW9 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.09□□□□□ -2.24
Ubfd1Q78JW9 Gm25110-201ENSMUST00000116684 121 ntBASIC1.08□□□□□ -2.24
Ubfd1Q78JW9 Gm25775-201ENSMUST00000116716 121 ntBASIC1.08□□□□□ -2.24
Ubfd1Q78JW9 Gm24795-201ENSMUST00000116737 121 ntBASIC1.08□□□□□ -2.24
Ubfd1Q78JW9 Gm25171-201ENSMUST00000116926 121 ntBASIC1.08□□□□□ -2.24
Ubfd1Q78JW9 Gm26274-201ENSMUST00000157103 321 ntBASIC1.08□□□□□ -2.24
Ubfd1Q78JW9 Gm22565-201ENSMUST00000175540 69 ntBASIC1.08□□□□□ -2.24
Ubfd1Q78JW9 Mir6985-201ENSMUST00000184641 61 ntBASIC1.08□□□□□ -2.24
Ubfd1Q78JW9 Gm28767-201ENSMUST00000188601 114 ntBASIC1.08□□□□□ -2.24
Ubfd1Q78JW9 AC164561.1-201ENSMUST00000220414 115 ntBASIC1.08□□□□□ -2.24
Ubfd1Q78JW9 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.08□□□□□ -2.24
Ubfd1Q78JW9 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.08□□□□□ -2.24
Ubfd1Q78JW9 Mir344-201ENSMUST00000083634 95 ntBASIC1.08□□□□□ -2.24
Ubfd1Q78JW9 Gm24449-201ENSMUST00000083985 106 ntBASIC1.08□□□□□ -2.24
Ubfd1Q78JW9 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Ubfd1Q78JW9 Gm24342-201ENSMUST00000103907 104 ntBASIC1.07□□□□□ -2.24
Ubfd1Q78JW9 Gm24728-201ENSMUST00000158226 125 ntBASIC1.07□□□□□ -2.24
Ubfd1Q78JW9 Gm23350-201ENSMUST00000158429 103 ntBASIC1.07□□□□□ -2.24
Ubfd1Q78JW9 Gm24575-201ENSMUST00000175502 77 ntBASIC1.07□□□□□ -2.24
Ubfd1Q78JW9 Mir669j-201ENSMUST00000179023 121 ntBASIC1.07□□□□□ -2.24
Ubfd1Q78JW9 Mir196b-201ENSMUST00000083509 85 ntBASIC1.07□□□□□ -2.24
Ubfd1Q78JW9 Scarna9-201ENSMUST00000104318 70 ntBASIC1.06□□□□□ -2.24
Ubfd1Q78JW9 Gm25496-201ENSMUST00000104430 120 ntBASIC1.06□□□□□ -2.24
Ubfd1Q78JW9 Gm25968-201ENSMUST00000157167 100 ntBASIC1.06□□□□□ -2.24
Ubfd1Q78JW9 Gm24942-201ENSMUST00000158328 114 ntBASIC1.06□□□□□ -2.24
Ubfd1Q78JW9 Gm24547-201ENSMUST00000158649 149 ntBASIC1.06□□□□□ -2.24
Ubfd1Q78JW9 Gm27974-201ENSMUST00000183415 105 ntBASIC1.06□□□□□ -2.24
Ubfd1Q78JW9 Gm42506-201ENSMUST00000202009 150 ntBASIC1.06□□□□□ -2.24
Ubfd1Q78JW9 Gm10351-201ENSMUST00000087694 125 ntBASIC1.06□□□□□ -2.24
Ubfd1Q78JW9 Gm15289-201ENSMUST00000117793 244 ntBASIC1.05□□□□□ -2.24
Ubfd1Q78JW9 Gm26358-201ENSMUST00000158215 97 ntBASIC1.05□□□□□ -2.24
Ubfd1Q78JW9 Mir1933-201ENSMUST00000158930 88 ntBASIC1.05□□□□□ -2.24
Ubfd1Q78JW9 Mir6381-201ENSMUST00000183426 87 ntBASIC1.05□□□□□ -2.24
Ubfd1Q78JW9 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
Ubfd1Q78JW9 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.04□□□□□ -2.24
Ubfd1Q78JW9 Mir1904-201ENSMUST00000122702 80 ntBASIC1.04□□□□□ -2.24
Ubfd1Q78JW9 Gm25329-201ENSMUST00000158041 126 ntBASIC1.04□□□□□ -2.24
Ubfd1Q78JW9 Gm26363-201ENSMUST00000158866 83 ntBASIC1.04□□□□□ -2.24
Ubfd1Q78JW9 Gm38323-201ENSMUST00000192450 210 ntBASIC1.04□□□□□ -2.24
Ubfd1Q78JW9 Gm22297-201ENSMUST00000083312 106 ntBASIC1.04□□□□□ -2.24
Ubfd1Q78JW9 Gm24030-201ENSMUST00000083931 164 ntBASIC1.04□□□□□ -2.24
Ubfd1Q78JW9 Gm25915-201ENSMUST00000104265 126 ntBASIC1.03□□□□□ -2.24
Ubfd1Q78JW9 Gm26089-201ENSMUST00000157898 107 ntBASIC1.03□□□□□ -2.24
Ubfd1Q78JW9 Mir3079-201ENSMUST00000175428 90 ntBASIC1.03□□□□□ -2.24
Ubfd1Q78JW9 Mir7091-201ENSMUST00000184075 79 ntBASIC1.03□□□□□ -2.24
Ubfd1Q78JW9 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Ubfd1Q78JW9 Gm27419-201ENSMUST00000184576 109 ntBASIC1.03□□□□□ -2.24
Ubfd1Q78JW9 Gm42935-201ENSMUST00000202004 151 ntBASIC1.03□□□□□ -2.24
Ubfd1Q78JW9 Gm10813-201ENSMUST00000099936 90 ntBASIC1.03□□□□□ -2.24
Ubfd1Q78JW9 Mir20b-201ENSMUST00000102087 80 ntBASIC1.02□□□□□ -2.25
Ubfd1Q78JW9 Gm16186-201ENSMUST00000120132 216 ntBASIC1.02□□□□□ -2.25
Ubfd1Q78JW9 Gm22384-201ENSMUST00000158187 104 ntBASIC1.02□□□□□ -2.25
Ubfd1Q78JW9 Gm25444-201ENSMUST00000158999 113 ntBASIC1.02□□□□□ -2.25
Ubfd1Q78JW9 Mir6390-201ENSMUST00000184405 129 ntBASIC1.02□□□□□ -2.25
Ubfd1Q78JW9 Gm44458-201ENSMUST00000196594 143 ntBASIC1.02□□□□□ -2.25
Ubfd1Q78JW9 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Ubfd1Q78JW9 Gm25544-201ENSMUST00000122676 120 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 139.1 ms