Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Mir219b-201ENSMUST00000198317 65 ntBASIC0.86□□□□□ -2.27
Smarca1Q6PGB8 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
Smarca1Q6PGB8 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.86□□□□□ -2.27
Smarca1Q6PGB8 Gm24920-201ENSMUST00000083018 85 ntBASIC0.86□□□□□ -2.27
Smarca1Q6PGB8 Gm23783-201ENSMUST00000157941 102 ntBASIC0.85□□□□□ -2.27
Smarca1Q6PGB8 Gm22967-201ENSMUST00000157956 239 ntBASIC0.85□□□□□ -2.27
Smarca1Q6PGB8 Gm22606-201ENSMUST00000158290 103 ntBASIC0.85□□□□□ -2.27
Smarca1Q6PGB8 Gm20386-201ENSMUST00000174010 132 ntBASIC0.85□□□□□ -2.27
Smarca1Q6PGB8 Mir21b-201ENSMUST00000184317 108 ntBASIC0.85□□□□□ -2.27
Smarca1Q6PGB8 Gm44807-201ENSMUST00000206115 154 ntBASIC0.85□□□□□ -2.27
Smarca1Q6PGB8 Gm22786-201ENSMUST00000104086 122 ntBASIC0.84□□□□□ -2.27
Smarca1Q6PGB8 Gm23321-201ENSMUST00000104465 126 ntBASIC0.84□□□□□ -2.27
Smarca1Q6PGB8 Mir7079-201ENSMUST00000184697 69 ntBASIC0.84□□□□□ -2.27
Smarca1Q6PGB8 Gm44488-201ENSMUST00000199467 119 ntBASIC0.84□□□□□ -2.27
Smarca1Q6PGB8 Gm23735-201ENSMUST00000082551 134 ntBASIC0.84□□□□□ -2.27
Smarca1Q6PGB8 Snord61-201ENSMUST00000083176 71 ntBASIC0.84□□□□□ -2.27
Smarca1Q6PGB8 Gm25610-201ENSMUST00000104016 129 ntBASIC0.83□□□□□ -2.28
Smarca1Q6PGB8 Snord69-201ENSMUST00000104024 80 ntBASIC0.83□□□□□ -2.28
Smarca1Q6PGB8 Gm23203-201ENSMUST00000104374 107 ntBASIC0.83□□□□□ -2.28
Smarca1Q6PGB8 Gm6272-201ENSMUST00000121256 171 ntBASIC0.83□□□□□ -2.28
Smarca1Q6PGB8 Gm22796-201ENSMUST00000157234 106 ntBASIC0.83□□□□□ -2.28
Smarca1Q6PGB8 Mir6364-201ENSMUST00000183396 86 ntBASIC0.83□□□□□ -2.28
Smarca1Q6PGB8 Gm28767-201ENSMUST00000188601 114 ntBASIC0.83□□□□□ -2.28
Smarca1Q6PGB8 AL929417.1-201ENSMUST00000214901 124 ntBASIC0.83□□□□□ -2.28
Smarca1Q6PGB8 Gm26225-201ENSMUST00000082508 135 ntBASIC0.83□□□□□ -2.28
Smarca1Q6PGB8 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Smarca1Q6PGB8 Gm24374-201ENSMUST00000104394 106 ntBASIC0.82□□□□□ -2.28
Smarca1Q6PGB8 Gm24476-201ENSMUST00000157437 131 ntBASIC0.82□□□□□ -2.28
Smarca1Q6PGB8 Gm22337-201ENSMUST00000157721 132 ntBASIC0.82□□□□□ -2.28
Smarca1Q6PGB8 Gm24131-201ENSMUST00000158539 107 ntBASIC0.82□□□□□ -2.28
Smarca1Q6PGB8 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.82□□□□□ -2.28
Smarca1Q6PGB8 Gm18665-201ENSMUST00000189783 270 ntBASIC0.82□□□□□ -2.28
Smarca1Q6PGB8 Gm43944-201ENSMUST00000205220 120 ntBASIC0.82□□□□□ -2.28
Smarca1Q6PGB8 Snord33-201ENSMUST00000083694 84 ntBASIC0.82□□□□□ -2.28
Smarca1Q6PGB8 Gm23126-201ENSMUST00000104260 134 ntBASIC0.81□□□□□ -2.28
Smarca1Q6PGB8 Gm24323-201ENSMUST00000175342 77 ntBASIC0.81□□□□□ -2.28
Smarca1Q6PGB8 Gm27446-201ENSMUST00000183963 89 ntBASIC0.81□□□□□ -2.28
Smarca1Q6PGB8 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Smarca1Q6PGB8 Gm25378-201ENSMUST00000104333 129 ntBASIC0.8□□□□□ -2.28
Smarca1Q6PGB8 Gm15654-201ENSMUST00000152660 300 ntBASIC0.8□□□□□ -2.28
Smarca1Q6PGB8 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.8□□□□□ -2.28
Smarca1Q6PGB8 Gm22466-201ENSMUST00000175278 69 ntBASIC0.8□□□□□ -2.28
Smarca1Q6PGB8 Gm28435-201ENSMUST00000185496 108 ntBASIC0.8□□□□□ -2.28
Smarca1Q6PGB8 Gm25814-201ENSMUST00000082754 107 ntBASIC0.8□□□□□ -2.28
Smarca1Q6PGB8 Gm22169-201ENSMUST00000083229 107 ntBASIC0.8□□□□□ -2.28
Smarca1Q6PGB8 Gm25138-201ENSMUST00000083248 136 ntBASIC0.8□□□□□ -2.28
Smarca1Q6PGB8 Gm22973-201ENSMUST00000083298 191 ntBASIC0.8□□□□□ -2.28
Smarca1Q6PGB8 Gm25410-201ENSMUST00000083758 137 ntBASIC0.8□□□□□ -2.28
Smarca1Q6PGB8 Gm14626-201ENSMUST00000117619 216 ntBASIC0.79□□□□□ -2.28
Smarca1Q6PGB8 Gm24549-201ENSMUST00000158647 139 ntBASIC0.79□□□□□ -2.28
Smarca1Q6PGB8 Mir1966-201ENSMUST00000158807 108 ntBASIC0.79□□□□□ -2.28
Smarca1Q6PGB8 Gm25161-201ENSMUST00000158913 132 ntBASIC0.79□□□□□ -2.28
Smarca1Q6PGB8 Gm25444-201ENSMUST00000158999 113 ntBASIC0.79□□□□□ -2.28
Smarca1Q6PGB8 Gm17020-201ENSMUST00000172274 274 ntBASIC0.79□□□□□ -2.28
Smarca1Q6PGB8 Gm20409-201ENSMUST00000173457 130 ntBASIC0.79□□□□□ -2.28
Smarca1Q6PGB8 Mir6369-201ENSMUST00000183772 106 ntBASIC0.79□□□□□ -2.28
Smarca1Q6PGB8 Gm38113-201ENSMUST00000193704 201 ntBASIC0.79□□□□□ -2.28
Smarca1Q6PGB8 Gm25980-201ENSMUST00000157176 218 ntBASIC0.78□□□□□ -2.28
Smarca1Q6PGB8 Gm24750-201ENSMUST00000157843 104 ntBASIC0.78□□□□□ -2.28
Smarca1Q6PGB8 Mir3969-201ENSMUST00000197106 92 ntBASIC0.78□□□□□ -2.28
Smarca1Q6PGB8 Gm44338-201ENSMUST00000198614 110 ntBASIC0.78□□□□□ -2.28
Smarca1Q6PGB8 Gm44211-201ENSMUST00000204867 145 ntBASIC0.78□□□□□ -2.28
Smarca1Q6PGB8 Gm24030-201ENSMUST00000083931 164 ntBASIC0.78□□□□□ -2.28
Smarca1Q6PGB8 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.77□□□□□ -2.29
Smarca1Q6PGB8 Gm24288-201ENSMUST00000157630 144 ntBASIC0.77□□□□□ -2.29
Smarca1Q6PGB8 Gm25599-201ENSMUST00000157816 103 ntBASIC0.77□□□□□ -2.29
Smarca1Q6PGB8 Gm22431-201ENSMUST00000158545 107 ntBASIC0.77□□□□□ -2.29
Smarca1Q6PGB8 Gm23337-201ENSMUST00000158959 118 ntBASIC0.77□□□□□ -2.29
Smarca1Q6PGB8 Mir6390-201ENSMUST00000184405 129 ntBASIC0.77□□□□□ -2.29
Smarca1Q6PGB8 Gm36956-201ENSMUST00000193830 214 ntBASIC0.77□□□□□ -2.29
Smarca1Q6PGB8 Mir30f-201ENSMUST00000196073 92 ntBASIC0.77□□□□□ -2.29
Smarca1Q6PGB8 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.77□□□□□ -2.29
Smarca1Q6PGB8 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.77□□□□□ -2.29
Smarca1Q6PGB8 Gm22753-201ENSMUST00000083657 107 ntBASIC0.77□□□□□ -2.29
Smarca1Q6PGB8 Gm23416-201ENSMUST00000175520 95 ntBASIC0.76□□□□□ -2.29
Smarca1Q6PGB8 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.76□□□□□ -2.29
Smarca1Q6PGB8 Scarna9-201ENSMUST00000104318 70 ntBASIC0.75□□□□□ -2.29
Smarca1Q6PGB8 Gm22105-201ENSMUST00000116734 116 ntBASIC0.75□□□□□ -2.29
Smarca1Q6PGB8 Gm14946-201ENSMUST00000119859 296 ntBASIC0.75□□□□□ -2.29
Smarca1Q6PGB8 Gm24747-201ENSMUST00000157835 87 ntBASIC0.75□□□□□ -2.29
Smarca1Q6PGB8 Gm22139-201ENSMUST00000158747 105 ntBASIC0.75□□□□□ -2.29
Smarca1Q6PGB8 Gm27792-201ENSMUST00000184031 115 ntBASIC0.75□□□□□ -2.29
Smarca1Q6PGB8 Mir7657-201ENSMUST00000196051 57 ntBASIC0.75□□□□□ -2.29
Smarca1Q6PGB8 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.74□□□□□ -2.29
Smarca1Q6PGB8 Gm25716-201ENSMUST00000158628 104 ntBASIC0.74□□□□□ -2.29
Smarca1Q6PGB8 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.74□□□□□ -2.29
Smarca1Q6PGB8 Gm23320-201ENSMUST00000104462 127 ntBASIC0.73□□□□□ -2.29
Smarca1Q6PGB8 Mir467g-201ENSMUST00000116906 120 ntBASIC0.73□□□□□ -2.29
Smarca1Q6PGB8 Gm23990-201ENSMUST00000117031 117 ntBASIC0.73□□□□□ -2.29
Smarca1Q6PGB8 Gm6985-201ENSMUST00000121255 271 ntBASIC0.73□□□□□ -2.29
Smarca1Q6PGB8 Gm16265-201ENSMUST00000134558 108 ntBASIC0.73□□□□□ -2.29
Smarca1Q6PGB8 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
Smarca1Q6PGB8 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.73□□□□□ -2.29
Smarca1Q6PGB8 Mir20b-201ENSMUST00000102087 80 ntBASIC0.72□□□□□ -2.29
Smarca1Q6PGB8 Gm15289-201ENSMUST00000117793 244 ntBASIC0.72□□□□□ -2.29
Smarca1Q6PGB8 Mir1899-201ENSMUST00000122798 96 ntBASIC0.72□□□□□ -2.29
Smarca1Q6PGB8 Gm24575-201ENSMUST00000175502 77 ntBASIC0.72□□□□□ -2.29
Smarca1Q6PGB8 Gm37545-201ENSMUST00000186512 148 ntBASIC0.72□□□□□ -2.29
Smarca1Q6PGB8 Gm37330-201ENSMUST00000192606 153 ntBASIC0.72□□□□□ -2.29
Smarca1Q6PGB8 Snord60-201ENSMUST00000082834 78 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 147.7 ms