Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.84□□□□□ -2.27
Snrnp40Q6PE01 Mir3094-201ENSMUST00000175121 64 ntBASIC0.84□□□□□ -2.27
Snrnp40Q6PE01 Mir411-201ENSMUST00000083543 82 ntBASIC0.84□□□□□ -2.27
Snrnp40Q6PE01 Gm43381-201ENSMUST00000198553 165 ntBASIC0.83□□□□□ -2.28
Snrnp40Q6PE01 AC168880.2-201ENSMUST00000224488 201 ntBASIC0.83□□□□□ -2.28
Snrnp40Q6PE01 Gm24509-201ENSMUST00000157086 101 ntBASIC0.82□□□□□ -2.28
Snrnp40Q6PE01 Gm25358-201ENSMUST00000157189 101 ntBASIC0.82□□□□□ -2.28
Snrnp40Q6PE01 Gm25060-201ENSMUST00000157374 130 ntBASIC0.82□□□□□ -2.28
Snrnp40Q6PE01 Gm23838-201ENSMUST00000158067 162 ntBASIC0.82□□□□□ -2.28
Snrnp40Q6PE01 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.82□□□□□ -2.28
Snrnp40Q6PE01 Gm25241-201ENSMUST00000174909 84 ntBASIC0.82□□□□□ -2.28
Snrnp40Q6PE01 Gm26217-201ENSMUST00000175212 84 ntBASIC0.82□□□□□ -2.28
Snrnp40Q6PE01 Mir3969-201ENSMUST00000197106 92 ntBASIC0.82□□□□□ -2.28
Snrnp40Q6PE01 Gm45268-201ENSMUST00000210046 370 ntBASIC0.82□□□□□ -2.28
Snrnp40Q6PE01 Snord32a-201ENSMUST00000083285 83 ntBASIC0.82□□□□□ -2.28
Snrnp40Q6PE01 Mir709-201ENSMUST00000102190 88 ntBASIC0.81□□□□□ -2.28
Snrnp40Q6PE01 Gm22544-201ENSMUST00000104349 127 ntBASIC0.81□□□□□ -2.28
Snrnp40Q6PE01 Gm22815-201ENSMUST00000157451 62 ntBASIC0.81□□□□□ -2.28
Snrnp40Q6PE01 Gm22336-201ENSMUST00000157719 107 ntBASIC0.81□□□□□ -2.28
Snrnp40Q6PE01 Gm26358-201ENSMUST00000158215 97 ntBASIC0.81□□□□□ -2.28
Snrnp40Q6PE01 Mir6364-201ENSMUST00000183396 86 ntBASIC0.81□□□□□ -2.28
Snrnp40Q6PE01 Gm44301-201ENSMUST00000200362 143 ntBASIC0.81□□□□□ -2.28
Snrnp40Q6PE01 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.81□□□□□ -2.28
Snrnp40Q6PE01 Mir489-201ENSMUST00000093599 107 ntBASIC0.81□□□□□ -2.28
Snrnp40Q6PE01 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
Snrnp40Q6PE01 Mir669b-201ENSMUST00000102172 97 ntBASIC0.8□□□□□ -2.28
Snrnp40Q6PE01 Gm24579-201ENSMUST00000103964 144 ntBASIC0.8□□□□□ -2.28
Snrnp40Q6PE01 Gm26412-201ENSMUST00000157666 55 ntBASIC0.8□□□□□ -2.28
Snrnp40Q6PE01 Gm23337-201ENSMUST00000158959 118 ntBASIC0.8□□□□□ -2.28
Snrnp40Q6PE01 Gm17528-201ENSMUST00000171026 239 ntBASIC0.8□□□□□ -2.28
Snrnp40Q6PE01 Mir7079-201ENSMUST00000184697 69 ntBASIC0.8□□□□□ -2.28
Snrnp40Q6PE01 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.8□□□□□ -2.28
Snrnp40Q6PE01 Gm8508-201ENSMUST00000061226 363 ntBASIC0.8□□□□□ -2.28
Snrnp40Q6PE01 Gm23509-201ENSMUST00000083080 160 ntBASIC0.8□□□□□ -2.28
Snrnp40Q6PE01 Mir297a-2-201ENSMUST00000103795 90 ntBASIC0.79□□□□□ -2.28
Snrnp40Q6PE01 Gm25611-201ENSMUST00000104017 133 ntBASIC0.79□□□□□ -2.28
Snrnp40Q6PE01 Snord90-201ENSMUST00000104568 111 ntBASIC0.79□□□□□ -2.28
Snrnp40Q6PE01 Gm13577-201ENSMUST00000121365 205 ntBASIC0.79□□□□□ -2.28
Snrnp40Q6PE01 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Snrnp40Q6PE01 Gm23253-201ENSMUST00000157441 104 ntBASIC0.79□□□□□ -2.28
Snrnp40Q6PE01 Mir15a-201ENSMUST00000175266 84 ntBASIC0.79□□□□□ -2.28
Snrnp40Q6PE01 Mir3079-201ENSMUST00000175428 90 ntBASIC0.79□□□□□ -2.28
Snrnp40Q6PE01 Gm24575-201ENSMUST00000175502 77 ntBASIC0.79□□□□□ -2.28
Snrnp40Q6PE01 Gm27446-201ENSMUST00000183963 89 ntBASIC0.79□□□□□ -2.28
Snrnp40Q6PE01 Gm27587-201ENSMUST00000185116 163 ntBASIC0.79□□□□□ -2.28
Snrnp40Q6PE01 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.79□□□□□ -2.28
Snrnp40Q6PE01 Gm25081-201ENSMUST00000082534 108 ntBASIC0.79□□□□□ -2.28
Snrnp40Q6PE01 Gm24920-201ENSMUST00000083018 85 ntBASIC0.79□□□□□ -2.28
Snrnp40Q6PE01 Mir33-201ENSMUST00000083531 69 ntBASIC0.79□□□□□ -2.28
Snrnp40Q6PE01 Gm25683-201ENSMUST00000083940 131 ntBASIC0.79□□□□□ -2.28
Snrnp40Q6PE01 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
Snrnp40Q6PE01 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Snrnp40Q6PE01 Gm23783-201ENSMUST00000157941 102 ntBASIC0.78□□□□□ -2.28
Snrnp40Q6PE01 Gm22801-201ENSMUST00000175624 84 ntBASIC0.78□□□□□ -2.28
Snrnp40Q6PE01 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.78□□□□□ -2.28
Snrnp40Q6PE01 Gm20734-201ENSMUST00000216939 193 ntBASIC0.78□□□□□ -2.28
Snrnp40Q6PE01 AC164561.1-201ENSMUST00000220414 115 ntBASIC0.78□□□□□ -2.28
Snrnp40Q6PE01 Mir532-201ENSMUST00000093630 96 ntBASIC0.78□□□□□ -2.28
Snrnp40Q6PE01 Mir695-201ENSMUST00000102261 109 ntBASIC0.77□□□□□ -2.29
Snrnp40Q6PE01 Gm25110-201ENSMUST00000116684 121 ntBASIC0.77□□□□□ -2.29
Snrnp40Q6PE01 Gm25775-201ENSMUST00000116716 121 ntBASIC0.77□□□□□ -2.29
Snrnp40Q6PE01 Gm24795-201ENSMUST00000116737 121 ntBASIC0.77□□□□□ -2.29
Snrnp40Q6PE01 Gm25171-201ENSMUST00000116926 121 ntBASIC0.77□□□□□ -2.29
Snrnp40Q6PE01 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.77□□□□□ -2.29
Snrnp40Q6PE01 Gm26091-201ENSMUST00000122704 82 ntBASIC0.77□□□□□ -2.29
Snrnp40Q6PE01 Gm24246-201ENSMUST00000157315 132 ntBASIC0.77□□□□□ -2.29
Snrnp40Q6PE01 Gm24288-201ENSMUST00000157630 144 ntBASIC0.77□□□□□ -2.29
Snrnp40Q6PE01 Gm44807-201ENSMUST00000206115 154 ntBASIC0.77□□□□□ -2.29
Snrnp40Q6PE01 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.77□□□□□ -2.29
Snrnp40Q6PE01 Gm25797-201ENSMUST00000082640 107 ntBASIC0.77□□□□□ -2.29
Snrnp40Q6PE01 Gm24461-201ENSMUST00000082735 103 ntBASIC0.77□□□□□ -2.29
Snrnp40Q6PE01 Gm26338-201ENSMUST00000102372 110 ntBASIC0.76□□□□□ -2.29
Snrnp40Q6PE01 Gm23126-201ENSMUST00000104260 134 ntBASIC0.76□□□□□ -2.29
Snrnp40Q6PE01 Scarna9-201ENSMUST00000104318 70 ntBASIC0.76□□□□□ -2.29
Snrnp40Q6PE01 Gm14946-201ENSMUST00000119859 296 ntBASIC0.76□□□□□ -2.29
Snrnp40Q6PE01 Gm25161-201ENSMUST00000158913 132 ntBASIC0.76□□□□□ -2.29
Snrnp40Q6PE01 Mir6369-201ENSMUST00000183772 106 ntBASIC0.76□□□□□ -2.29
Snrnp40Q6PE01 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Snrnp40Q6PE01 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.76□□□□□ -2.29
Snrnp40Q6PE01 Mir219b-201ENSMUST00000198317 65 ntBASIC0.76□□□□□ -2.29
Snrnp40Q6PE01 AC165138.1-201ENSMUST00000226984 270 ntBASIC0.76□□□□□ -2.29
Snrnp40Q6PE01 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.76□□□□□ -2.29
Snrnp40Q6PE01 Gm25968-201ENSMUST00000157167 100 ntBASIC0.75□□□□□ -2.29
Snrnp40Q6PE01 Gm22966-201ENSMUST00000157957 129 ntBASIC0.75□□□□□ -2.29
Snrnp40Q6PE01 Mir6380-201ENSMUST00000184334 81 ntBASIC0.75□□□□□ -2.29
Snrnp40Q6PE01 Mir101a-201ENSMUST00000083517 83 ntBASIC0.75□□□□□ -2.29
Snrnp40Q6PE01 Mir362-201ENSMUST00000093592 65 ntBASIC0.75□□□□□ -2.29
Snrnp40Q6PE01 Gm24263-201ENSMUST00000104059 107 ntBASIC0.74□□□□□ -2.29
Snrnp40Q6PE01 Gm23321-201ENSMUST00000104465 126 ntBASIC0.74□□□□□ -2.29
Snrnp40Q6PE01 Gm22842-201ENSMUST00000157709 118 ntBASIC0.74□□□□□ -2.29
Snrnp40Q6PE01 Gm16550-201ENSMUST00000162550 126 ntBASIC0.74□□□□□ -2.29
Snrnp40Q6PE01 Gm20409-201ENSMUST00000173457 130 ntBASIC0.74□□□□□ -2.29
Snrnp40Q6PE01 Mir7657-201ENSMUST00000196051 57 ntBASIC0.74□□□□□ -2.29
Snrnp40Q6PE01 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
Snrnp40Q6PE01 Gm24616-201ENSMUST00000083274 139 ntBASIC0.74□□□□□ -2.29
Snrnp40Q6PE01 Gm24030-201ENSMUST00000083931 164 ntBASIC0.74□□□□□ -2.29
Snrnp40Q6PE01 Gm25610-201ENSMUST00000104016 129 ntBASIC0.73□□□□□ -2.29
Snrnp40Q6PE01 Gm23203-201ENSMUST00000104374 107 ntBASIC0.73□□□□□ -2.29
Snrnp40Q6PE01 Gm15654-201ENSMUST00000152660 300 ntBASIC0.73□□□□□ -2.29
Snrnp40Q6PE01 Gm22349-201ENSMUST00000157864 107 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 139.5 ms