Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm24547-201ENSMUST00000158649 149 ntBASIC1.26□□□□□ -2.21
Rnf220Q6PDX6 Gm8034-201ENSMUST00000178853 132 ntBASIC1.26□□□□□ -2.21
Rnf220Q6PDX6 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.26□□□□□ -2.21
Rnf220Q6PDX6 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.26□□□□□ -2.21
Rnf220Q6PDX6 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.26□□□□□ -2.21
Rnf220Q6PDX6 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.26□□□□□ -2.21
Rnf220Q6PDX6 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.26□□□□□ -2.21
Rnf220Q6PDX6 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.26□□□□□ -2.21
Rnf220Q6PDX6 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.26□□□□□ -2.21
Rnf220Q6PDX6 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.26□□□□□ -2.21
Rnf220Q6PDX6 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.26□□□□□ -2.21
Rnf220Q6PDX6 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.26□□□□□ -2.21
Rnf220Q6PDX6 AC126939.1-201ENSMUST00000224943 226 ntBASIC1.26□□□□□ -2.21
Rnf220Q6PDX6 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC1.25□□□□□ -2.21
Rnf220Q6PDX6 Gm25110-201ENSMUST00000116684 121 ntBASIC1.25□□□□□ -2.21
Rnf220Q6PDX6 Gm25775-201ENSMUST00000116716 121 ntBASIC1.25□□□□□ -2.21
Rnf220Q6PDX6 Gm24795-201ENSMUST00000116737 121 ntBASIC1.25□□□□□ -2.21
Rnf220Q6PDX6 Gm25171-201ENSMUST00000116926 121 ntBASIC1.25□□□□□ -2.21
Rnf220Q6PDX6 Gm11248-201ENSMUST00000119568 201 ntBASIC1.25□□□□□ -2.21
Rnf220Q6PDX6 Gm26274-201ENSMUST00000157103 321 ntBASIC1.25□□□□□ -2.21
Rnf220Q6PDX6 Gm22558-201ENSMUST00000157326 95 ntBASIC1.25□□□□□ -2.21
Rnf220Q6PDX6 Gm22556-201ENSMUST00000157803 100 ntBASIC1.25□□□□□ -2.21
Rnf220Q6PDX6 Gm23558-201ENSMUST00000157823 80 ntBASIC1.25□□□□□ -2.21
Rnf220Q6PDX6 Traj61-201ENSMUST00000165025 72 ntBASIC1.25□□□□□ -2.21
Rnf220Q6PDX6 Mir7225-201ENSMUST00000184178 54 ntBASIC1.25□□□□□ -2.21
Rnf220Q6PDX6 mt-Ts2-201ENSMUST00000082416 59 ntBASIC1.25□□□□□ -2.21
Rnf220Q6PDX6 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.24□□□□□ -2.21
Rnf220Q6PDX6 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.24□□□□□ -2.21
Rnf220Q6PDX6 Mir301b-201ENSMUST00000102333 97 ntBASIC1.24□□□□□ -2.21
Rnf220Q6PDX6 Gm22485-201ENSMUST00000157990 109 ntBASIC1.24□□□□□ -2.21
Rnf220Q6PDX6 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
Rnf220Q6PDX6 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Rnf220Q6PDX6 Gm22381-201ENSMUST00000158186 107 ntBASIC1.23□□□□□ -2.21
Rnf220Q6PDX6 Gm26363-201ENSMUST00000158866 83 ntBASIC1.23□□□□□ -2.21
Rnf220Q6PDX6 Mir1933-201ENSMUST00000158930 88 ntBASIC1.23□□□□□ -2.21
Rnf220Q6PDX6 Gm37330-201ENSMUST00000192606 153 ntBASIC1.23□□□□□ -2.21
Rnf220Q6PDX6 Gm42533-201ENSMUST00000196247 157 ntBASIC1.23□□□□□ -2.21
Rnf220Q6PDX6 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC1.23□□□□□ -2.21
Rnf220Q6PDX6 Gm25938-201ENSMUST00000104139 166 ntBASIC1.22□□□□□ -2.21
Rnf220Q6PDX6 Gm25968-201ENSMUST00000157167 100 ntBASIC1.22□□□□□ -2.21
Rnf220Q6PDX6 Gm38323-201ENSMUST00000192450 210 ntBASIC1.22□□□□□ -2.21
Rnf220Q6PDX6 Gm12013-201ENSMUST00000121971 155 ntBASIC1.21□□□□□ -2.22
Rnf220Q6PDX6 Mir1904-201ENSMUST00000122702 80 ntBASIC1.21□□□□□ -2.22
Rnf220Q6PDX6 Mir1899-201ENSMUST00000122798 96 ntBASIC1.21□□□□□ -2.22
Rnf220Q6PDX6 Gm25444-201ENSMUST00000158999 113 ntBASIC1.21□□□□□ -2.22
Rnf220Q6PDX6 Gm24638-201ENSMUST00000179807 132 ntBASIC1.21□□□□□ -2.22
Rnf220Q6PDX6 Gm26379-202ENSMUST00000200225 132 ntBASIC1.21□□□□□ -2.22
Rnf220Q6PDX6 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Rnf220Q6PDX6 Gm25377-201ENSMUST00000104334 129 ntBASIC1.2□□□□□ -2.22
Rnf220Q6PDX6 Gm27898-201ENSMUST00000183987 80 ntBASIC1.2□□□□□ -2.22
Rnf220Q6PDX6 Mir7091-201ENSMUST00000184075 79 ntBASIC1.2□□□□□ -2.22
Rnf220Q6PDX6 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Rnf220Q6PDX6 Gm22196-201ENSMUST00000116865 109 ntBASIC1.19□□□□□ -2.22
Rnf220Q6PDX6 Gm14882-201ENSMUST00000117216 218 ntBASIC1.19□□□□□ -2.22
Rnf220Q6PDX6 Gm24476-201ENSMUST00000157437 131 ntBASIC1.19□□□□□ -2.22
Rnf220Q6PDX6 Mir3079-201ENSMUST00000175428 90 ntBASIC1.19□□□□□ -2.22
Rnf220Q6PDX6 Trbv25-201ENSMUST00000194700 273 ntBASIC1.19□□□□□ -2.22
Rnf220Q6PDX6 Snord60-201ENSMUST00000082834 78 ntBASIC1.19□□□□□ -2.22
Rnf220Q6PDX6 Gm24605-201ENSMUST00000104772 96 ntBASIC1.18□□□□□ -2.22
Rnf220Q6PDX6 Gm25544-201ENSMUST00000122676 120 ntBASIC1.18□□□□□ -2.22
Rnf220Q6PDX6 Gm23434-201ENSMUST00000157179 100 ntBASIC1.18□□□□□ -2.22
Rnf220Q6PDX6 Gm26498-201ENSMUST00000177799 79 ntBASIC1.18□□□□□ -2.22
Rnf220Q6PDX6 Gm26398-201ENSMUST00000179015 127 ntBASIC1.18□□□□□ -2.22
Rnf220Q6PDX6 Gm26230-201ENSMUST00000180141 79 ntBASIC1.18□□□□□ -2.22
Rnf220Q6PDX6 Mir6390-201ENSMUST00000184405 129 ntBASIC1.18□□□□□ -2.22
Rnf220Q6PDX6 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC1.18□□□□□ -2.22
Rnf220Q6PDX6 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.18□□□□□ -2.22
Rnf220Q6PDX6 Gm43944-201ENSMUST00000205220 120 ntBASIC1.18□□□□□ -2.22
Rnf220Q6PDX6 Gm24926-201ENSMUST00000178053 79 ntBASIC1.17□□□□□ -2.22
Rnf220Q6PDX6 Gm22632-201ENSMUST00000178266 79 ntBASIC1.17□□□□□ -2.22
Rnf220Q6PDX6 Mir500-201ENSMUST00000093600 92 ntBASIC1.17□□□□□ -2.22
Rnf220Q6PDX6 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
Rnf220Q6PDX6 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Rnf220Q6PDX6 Gm23881-201ENSMUST00000116872 66 ntBASIC1.16□□□□□ -2.22
Rnf220Q6PDX6 Gm24916-201ENSMUST00000157287 79 ntBASIC1.16□□□□□ -2.22
Rnf220Q6PDX6 Gm24777-201ENSMUST00000157644 107 ntBASIC1.16□□□□□ -2.22
Rnf220Q6PDX6 Gm24076-201ENSMUST00000158179 94 ntBASIC1.16□□□□□ -2.22
Rnf220Q6PDX6 Gm25901-201ENSMUST00000158494 130 ntBASIC1.16□□□□□ -2.22
Rnf220Q6PDX6 Gm23267-201ENSMUST00000178490 132 ntBASIC1.16□□□□□ -2.22
Rnf220Q6PDX6 Mir21c-201ENSMUST00000184910 78 ntBASIC1.16□□□□□ -2.22
Rnf220Q6PDX6 AC124687.1-201ENSMUST00000221868 189 ntBASIC1.16□□□□□ -2.22
Rnf220Q6PDX6 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.16□□□□□ -2.22
Rnf220Q6PDX6 Gm22753-201ENSMUST00000083657 107 ntBASIC1.16□□□□□ -2.22
Rnf220Q6PDX6 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Rnf220Q6PDX6 Mir1191-201ENSMUST00000116883 120 ntBASIC1.15□□□□□ -2.23
Rnf220Q6PDX6 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.15□□□□□ -2.23
Rnf220Q6PDX6 n-R5s39-201ENSMUST00000122613 108 ntBASIC1.15□□□□□ -2.23
Rnf220Q6PDX6 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.15□□□□□ -2.23
Rnf220Q6PDX6 Gm24223-201ENSMUST00000158827 90 ntBASIC1.15□□□□□ -2.23
Rnf220Q6PDX6 Gm25166-201ENSMUST00000158909 111 ntBASIC1.15□□□□□ -2.23
Rnf220Q6PDX6 Gm27974-201ENSMUST00000183415 105 ntBASIC1.15□□□□□ -2.23
Rnf220Q6PDX6 Gm36956-201ENSMUST00000193830 214 ntBASIC1.15□□□□□ -2.23
Rnf220Q6PDX6 Mir30a-201ENSMUST00000083471 71 ntBASIC1.15□□□□□ -2.23
Rnf220Q6PDX6 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Rnf220Q6PDX6 Gm22638-201ENSMUST00000179674 107 ntBASIC1.14□□□□□ -2.23
Rnf220Q6PDX6 Mir3087-201ENSMUST00000199405 56 ntBASIC1.14□□□□□ -2.23
Rnf220Q6PDX6 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.14□□□□□ -2.23
Rnf220Q6PDX6 AC159093.2-201ENSMUST00000227881 297 ntBASIC1.14□□□□□ -2.23
Rnf220Q6PDX6 Gm24527-201ENSMUST00000082920 107 ntBASIC1.14□□□□□ -2.23
Rnf220Q6PDX6 Gm26080-201ENSMUST00000104069 131 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 139.5 ms