Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.14□□□□□ -2.43
Ccdc88aQ5SNZ0 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.14□□□□□ -2.43
Ccdc88aQ5SNZ0 Gm27845-201ENSMUST00000184479 114 ntBASIC-0.14□□□□□ -2.43
Ccdc88aQ5SNZ0 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.14□□□□□ -2.43
Ccdc88aQ5SNZ0 Gm25588-201ENSMUST00000082501 140 ntBASIC-0.14□□□□□ -2.43
Ccdc88aQ5SNZ0 Gm26202-201ENSMUST00000082910 65 ntBASIC-0.14□□□□□ -2.43
Ccdc88aQ5SNZ0 Gm24121-201ENSMUST00000102029 106 ntBASIC-0.14□□□□□ -2.43
Ccdc88aQ5SNZ0 Gm22784-201ENSMUST00000104088 132 ntBASIC-0.14□□□□□ -2.43
Ccdc88aQ5SNZ0 Gm23841-201ENSMUST00000116951 114 ntBASIC-0.14□□□□□ -2.43
Ccdc88aQ5SNZ0 Mir669i-201ENSMUST00000117007 127 ntBASIC-0.14□□□□□ -2.43
Ccdc88aQ5SNZ0 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.14□□□□□ -2.43
Ccdc88aQ5SNZ0 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.14□□□□□ -2.43
Ccdc88aQ5SNZ0 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.14□□□□□ -2.43
Ccdc88aQ5SNZ0 Gm25895-201ENSMUST00000083714 100 ntBASIC-0.14□□□□□ -2.43
Ccdc88aQ5SNZ0 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.15□□□□□ -2.43
Ccdc88aQ5SNZ0 Gm13797-201ENSMUST00000121792 120 ntBASIC-0.15□□□□□ -2.43
Ccdc88aQ5SNZ0 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.15□□□□□ -2.43
Ccdc88aQ5SNZ0 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.15□□□□□ -2.43
Ccdc88aQ5SNZ0 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.15□□□□□ -2.43
Ccdc88aQ5SNZ0 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.15□□□□□ -2.43
Ccdc88aQ5SNZ0 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.16□□□□□ -2.43
Ccdc88aQ5SNZ0 Gm27585-201ENSMUST00000183717 199 ntBASIC-0.16□□□□□ -2.43
Ccdc88aQ5SNZ0 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-0.16□□□□□ -2.43
Ccdc88aQ5SNZ0 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.16□□□□□ -2.43
Ccdc88aQ5SNZ0 Gm25848-201ENSMUST00000116790 144 ntBASIC-0.16□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm26360-201ENSMUST00000158872 103 ntBASIC-0.16□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm27476-201ENSMUST00000183366 104 ntBASIC-0.16□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm23345-201ENSMUST00000083817 150 ntBASIC-0.16□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm22612-201ENSMUST00000158293 101 ntBASIC-0.17□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm26159-201ENSMUST00000158968 104 ntBASIC-0.17□□□□□ -2.44
Ccdc88aQ5SNZ0 AC192333.1-201ENSMUST00000224573 376 ntBASIC-0.17□□□□□ -2.44
Ccdc88aQ5SNZ0 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.17□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.17□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.18□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm23214-201ENSMUST00000122716 157 ntBASIC-0.18□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm23219-201ENSMUST00000158123 87 ntBASIC-0.18□□□□□ -2.44
Ccdc88aQ5SNZ0 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.18□□□□□ -2.44
Ccdc88aQ5SNZ0 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm24509-201ENSMUST00000157086 101 ntBASIC-0.18□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm25358-201ENSMUST00000157189 101 ntBASIC-0.18□□□□□ -2.44
Ccdc88aQ5SNZ0 Mir466m-201ENSMUST00000175052 84 ntBASIC-0.18□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.18□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.18□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.18□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.19□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm27446-201ENSMUST00000183963 89 ntBASIC-0.19□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.2□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm26279-201ENSMUST00000157095 102 ntBASIC-0.2□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.2□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm25362-201ENSMUST00000158854 105 ntBASIC-0.2□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.2□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm28767-201ENSMUST00000188601 114 ntBASIC-0.2□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.2□□□□□ -2.44
Ccdc88aQ5SNZ0 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.2□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.2□□□□□ -2.44
Ccdc88aQ5SNZ0 Snord19-201ENSMUST00000104609 76 ntBASIC-0.2□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm23763-201ENSMUST00000158345 60 ntBASIC-0.2□□□□□ -2.44
Ccdc88aQ5SNZ0 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.2□□□□□ -2.44
Ccdc88aQ5SNZ0 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.2□□□□□ -2.44
Ccdc88aQ5SNZ0 Mir186-201ENSMUST00000083497 71 ntBASIC-0.2□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm26168-201ENSMUST00000083787 112 ntBASIC-0.2□□□□□ -2.44
Ccdc88aQ5SNZ0 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.21□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm26293-201ENSMUST00000104170 84 ntBASIC-0.21□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm14567-201ENSMUST00000117155 174 ntBASIC-0.21□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm14906-201ENSMUST00000119265 390 ntBASIC-0.21□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.21□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm25424-201ENSMUST00000157612 58 ntBASIC-0.21□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm23581-201ENSMUST00000158531 63 ntBASIC-0.21□□□□□ -2.44
Ccdc88aQ5SNZ0 AC153646.2-201ENSMUST00000220516 109 ntBASIC-0.21□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm24316-201ENSMUST00000083041 107 ntBASIC-0.21□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.21□□□□□ -2.44
Ccdc88aQ5SNZ0 Mir466p-201ENSMUST00000103925 89 ntBASIC-0.22□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm24729-201ENSMUST00000158225 137 ntBASIC-0.22□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.22□□□□□ -2.44
Ccdc88aQ5SNZ0 Mir3969-201ENSMUST00000197106 92 ntBASIC-0.22□□□□□ -2.44
Ccdc88aQ5SNZ0 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.22□□□□□ -2.44
Ccdc88aQ5SNZ0 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.22□□□□□ -2.44
Ccdc88aQ5SNZ0 Gm25364-201ENSMUST00000158851 107 ntBASIC-0.22□□□□□ -2.45
Ccdc88aQ5SNZ0 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.22□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm42795-201ENSMUST00000198847 76 ntBASIC-0.22□□□□□ -2.45
Ccdc88aQ5SNZ0 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.22□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.22□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.23□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm23080-201ENSMUST00000157846 103 ntBASIC-0.23□□□□□ -2.45
Ccdc88aQ5SNZ0 Mir3970-201ENSMUST00000199287 90 ntBASIC-0.23□□□□□ -2.45
Ccdc88aQ5SNZ0 Mir384-201ENSMUST00000083565 88 ntBASIC-0.23□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.24□□□□□ -2.45
Ccdc88aQ5SNZ0 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.24□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.24□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm12686-201ENSMUST00000120546 397 ntBASIC-0.24□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm25235-201ENSMUST00000179933 107 ntBASIC-0.24□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm27747-201ENSMUST00000184707 85 ntBASIC-0.24□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-0.24□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm11388-201ENSMUST00000120908 159 ntBASIC-0.25□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm22836-201ENSMUST00000158441 61 ntBASIC-0.25□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.25□□□□□ -2.45
Ccdc88aQ5SNZ0 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.25□□□□□ -2.45
Ccdc88aQ5SNZ0 Mir18-201ENSMUST00000083469 96 ntBASIC-0.25□□□□□ -2.45
Ccdc88aQ5SNZ0 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 267.5 ms