Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm22732-201ENSMUST00000158093 121 ntBASIC-1.62□□□□□ -2.67
Trav3-1Q5R1I8 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.62□□□□□ -2.67
Trav3-1Q5R1I8 Gm23186-201ENSMUST00000180078 107 ntBASIC-1.62□□□□□ -2.67
Trav3-1Q5R1I8 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-1.62□□□□□ -2.67
Trav3-1Q5R1I8 Gm26207-201ENSMUST00000082909 104 ntBASIC-1.62□□□□□ -2.67
Trav3-1Q5R1I8 Gm24445-201ENSMUST00000083981 107 ntBASIC-1.62□□□□□ -2.67
Trav3-1Q5R1I8 Mir582-201ENSMUST00000103758 81 ntBASIC-1.63□□□□□ -2.67
Trav3-1Q5R1I8 Gm24372-201ENSMUST00000104400 110 ntBASIC-1.63□□□□□ -2.67
Trav3-1Q5R1I8 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-1.63□□□□□ -2.67
Trav3-1Q5R1I8 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC-1.63□□□□□ -2.67
Trav3-1Q5R1I8 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-1.63□□□□□ -2.67
Trav3-1Q5R1I8 Mir218-1-201ENSMUST00000083669 110 ntBASIC-1.63□□□□□ -2.67
Trav3-1Q5R1I8 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-1.64□□□□□ -2.67
Trav3-1Q5R1I8 Gm24377-201ENSMUST00000104398 131 ntBASIC-1.64□□□□□ -2.67
Trav3-1Q5R1I8 Gm11936-201ENSMUST00000118323 160 ntBASIC-1.64□□□□□ -2.67
Trav3-1Q5R1I8 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC-1.64□□□□□ -2.67
Trav3-1Q5R1I8 Gm26482-201ENSMUST00000158015 62 ntBASIC-1.64□□□□□ -2.67
Trav3-1Q5R1I8 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC-1.64□□□□□ -2.67
Trav3-1Q5R1I8 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.64□□□□□ -2.67
Trav3-1Q5R1I8 Mir463-201ENSMUST00000093570 75 ntBASIC-1.64□□□□□ -2.67
Trav3-1Q5R1I8 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-1.65□□□□□ -2.67
Trav3-1Q5R1I8 Gm19248-201ENSMUST00000209404 110 ntBASIC-1.65□□□□□ -2.67
Trav3-1Q5R1I8 Gm25296-201ENSMUST00000082566 67 ntBASIC-1.65□□□□□ -2.67
Trav3-1Q5R1I8 Gm27672-201ENSMUST00000183751 204 ntBASIC-1.66□□□□□ -2.68
Trav3-1Q5R1I8 Gm37796-201ENSMUST00000195327 134 ntBASIC-1.66□□□□□ -2.68
Trav3-1Q5R1I8 Mir7657-201ENSMUST00000196051 57 ntBASIC-1.66□□□□□ -2.68
Trav3-1Q5R1I8 AC145736.2-201ENSMUST00000216305 365 ntBASIC-1.66□□□□□ -2.68
Trav3-1Q5R1I8 AC158982.2-201ENSMUST00000226283 184 ntBASIC-1.66□□□□□ -2.68
Trav3-1Q5R1I8 AC132918.1-201ENSMUST00000227877 925 ntBASIC-1.66□□□□□ -2.68
Trav3-1Q5R1I8 Gm23423-201ENSMUST00000082782 106 ntBASIC-1.66□□□□□ -2.68
Trav3-1Q5R1I8 Gm25507-201ENSMUST00000116981 144 ntBASIC-1.67□□□□□ -2.68
Trav3-1Q5R1I8 Gm22332-201ENSMUST00000158072 126 ntBASIC-1.67□□□□□ -2.68
Trav3-1Q5R1I8 Gm24111-201ENSMUST00000175491 97 ntBASIC-1.67□□□□□ -2.68
Trav3-1Q5R1I8 Gm23191-201ENSMUST00000179147 107 ntBASIC-1.67□□□□□ -2.68
Trav3-1Q5R1I8 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.67□□□□□ -2.68
Trav3-1Q5R1I8 CT025526.1-201ENSMUST00000217327 267 ntBASIC-1.67□□□□□ -2.68
Trav3-1Q5R1I8 Gm29818-201ENSMUST00000218070 165 ntBASIC-1.67□□□□□ -2.68
Trav3-1Q5R1I8 Gm22598-201ENSMUST00000157600 127 ntBASIC-1.68□□□□□ -2.68
Trav3-1Q5R1I8 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-1.68□□□□□ -2.68
Trav3-1Q5R1I8 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC-1.68□□□□□ -2.68
Trav3-1Q5R1I8 Gm25142-201ENSMUST00000082698 107 ntBASIC-1.68□□□□□ -2.68
Trav3-1Q5R1I8 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-1.69□□□□□ -2.68
Trav3-1Q5R1I8 Gm25056-201ENSMUST00000157372 62 ntBASIC-1.69□□□□□ -2.68
Trav3-1Q5R1I8 Gm25656-201ENSMUST00000158466 66 ntBASIC-1.69□□□□□ -2.68
Trav3-1Q5R1I8 Gm24204-201ENSMUST00000082950 107 ntBASIC-1.69□□□□□ -2.68
Trav3-1Q5R1I8 Gm22287-201ENSMUST00000083197 107 ntBASIC-1.69□□□□□ -2.68
Trav3-1Q5R1I8 Gm23982-201ENSMUST00000157141 106 ntBASIC-1.7□□□□□ -2.68
Trav3-1Q5R1I8 Snord8-201ENSMUST00000175303 110 ntBASIC-1.7□□□□□ -2.68
Trav3-1Q5R1I8 Mir6336-201ENSMUST00000183581 130 ntBASIC-1.7□□□□□ -2.68
Trav3-1Q5R1I8 Gm27957-201ENSMUST00000184054 127 ntBASIC-1.7□□□□□ -2.68
Trav3-1Q5R1I8 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.7□□□□□ -2.68
Trav3-1Q5R1I8 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC-1.7□□□□□ -2.68
Trav3-1Q5R1I8 Gm22686-201ENSMUST00000082847 100 ntBASIC-1.7□□□□□ -2.68
Trav3-1Q5R1I8 Gm25275-201ENSMUST00000104297 129 ntBASIC-1.71□□□□□ -2.68
Trav3-1Q5R1I8 Gm11322-201ENSMUST00000118095 435 ntBASIC-1.71□□□□□ -2.68
Trav3-1Q5R1I8 Snord2-201ENSMUST00000157899 69 ntBASIC-1.71□□□□□ -2.68
Trav3-1Q5R1I8 Ighv15-1-201ENSMUST00000194450 276 ntBASIC-1.71□□□□□ -2.68
Trav3-1Q5R1I8 AC116589.3-202ENSMUST00000221770 649 ntBASIC-1.71□□□□□ -2.68
Trav3-1Q5R1I8 AC116589.6-201ENSMUST00000222252 649 ntBASIC-1.71□□□□□ -2.68
Trav3-1Q5R1I8 Gm23242-201ENSMUST00000083055 107 ntBASIC-1.71□□□□□ -2.68
Trav3-1Q5R1I8 Gm25629-201ENSMUST00000084001 107 ntBASIC-1.71□□□□□ -2.68
Trav3-1Q5R1I8 Gm25875-201ENSMUST00000104323 107 ntBASIC-1.72□□□□□ -2.68
Trav3-1Q5R1I8 Gm16356-201ENSMUST00000143300 169 ntBASIC-1.72□□□□□ -2.68
Trav3-1Q5R1I8 Gm25769-201ENSMUST00000158569 127 ntBASIC-1.72□□□□□ -2.68
Trav3-1Q5R1I8 Gm23726-201ENSMUST00000178937 67 ntBASIC-1.72□□□□□ -2.68
Trav3-1Q5R1I8 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.72□□□□□ -2.68
Trav3-1Q5R1I8 Gm37763-201ENSMUST00000193445 120 ntBASIC-1.72□□□□□ -2.68
Trav3-1Q5R1I8 Mir3535-201ENSMUST00000197651 147 ntBASIC-1.72□□□□□ -2.68
Trav3-1Q5R1I8 AC159896.1-201ENSMUST00000215264 215 ntBASIC-1.72□□□□□ -2.68
Trav3-1Q5R1I8 n-R5s94-201ENSMUST00000082573 119 ntBASIC-1.72□□□□□ -2.68
Trav3-1Q5R1I8 Gm26018-201ENSMUST00000104406 128 ntBASIC-1.73□□□□□ -2.69
Trav3-1Q5R1I8 Gm25329-201ENSMUST00000158041 126 ntBASIC-1.73□□□□□ -2.69
Trav3-1Q5R1I8 Gm22675-201ENSMUST00000158430 104 ntBASIC-1.73□□□□□ -2.69
Trav3-1Q5R1I8 Gm26400-201ENSMUST00000175012 85 ntBASIC-1.73□□□□□ -2.69
Trav3-1Q5R1I8 Gm26438-201ENSMUST00000082593 107 ntBASIC-1.73□□□□□ -2.69
Trav3-1Q5R1I8 Gm13720-201ENSMUST00000120741 196 ntBASIC-1.74□□□□□ -2.69
Trav3-1Q5R1I8 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-1.74□□□□□ -2.69
Trav3-1Q5R1I8 Gm26293-201ENSMUST00000104170 84 ntBASIC-1.75□□□□□ -2.69
Trav3-1Q5R1I8 Gm26420-201ENSMUST00000104273 103 ntBASIC-1.75□□□□□ -2.69
Trav3-1Q5R1I8 Gm14567-201ENSMUST00000117155 174 ntBASIC-1.75□□□□□ -2.69
Trav3-1Q5R1I8 Gm11694-201ENSMUST00000118637 159 ntBASIC-1.75□□□□□ -2.69
Trav3-1Q5R1I8 Gm23640-201ENSMUST00000157860 104 ntBASIC-1.75□□□□□ -2.69
Trav3-1Q5R1I8 Gm25615-201ENSMUST00000177836 94 ntBASIC-1.75□□□□□ -2.69
Trav3-1Q5R1I8 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.75□□□□□ -2.69
Trav3-1Q5R1I8 Gm26379-202ENSMUST00000200225 132 ntBASIC-1.75□□□□□ -2.69
Trav3-1Q5R1I8 Gm43907-201ENSMUST00000203128 117 ntBASIC-1.75□□□□□ -2.69
Trav3-1Q5R1I8 Gm44563-201ENSMUST00000207958 178 ntBASIC-1.75□□□□□ -2.69
Trav3-1Q5R1I8 AC168880.2-201ENSMUST00000224488 201 ntBASIC-1.75□□□□□ -2.69
Trav3-1Q5R1I8 Gm24971-201ENSMUST00000175581 110 ntBASIC-1.76□□□□□ -2.69
Trav3-1Q5R1I8 Gm42594-201ENSMUST00000199511 246 ntBASIC-1.76□□□□□ -2.69
Trav3-1Q5R1I8 Gm23892-201ENSMUST00000158105 130 ntBASIC-1.77□□□□□ -2.69
Trav3-1Q5R1I8 Mir6928-201ENSMUST00000185166 70 ntBASIC-1.77□□□□□ -2.69
Trav3-1Q5R1I8 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC-1.77□□□□□ -2.69
Trav3-1Q5R1I8 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC-1.77□□□□□ -2.69
Trav3-1Q5R1I8 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC-1.77□□□□□ -2.69
Trav3-1Q5R1I8 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC-1.78□□□□□ -2.69
Trav3-1Q5R1I8 Gm14307-201ENSMUST00000118930 291 ntBASIC-1.78□□□□□ -2.69
Trav3-1Q5R1I8 Gm14297-201ENSMUST00000129110 291 ntBASIC-1.78□□□□□ -2.69
Trav3-1Q5R1I8 Gm24238-201ENSMUST00000157792 98 ntBASIC-1.78□□□□□ -2.69
Trav3-1Q5R1I8 Gm26402-201ENSMUST00000158499 113 ntBASIC-1.78□□□□□ -2.69
Retrieved 100 of 76,532 protein–RNA pairs in 179.5 ms