Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm23600-201ENSMUST00000157260 71 ntBASIC4.29□□□□□ -1.72
Trim41Q5NCC3 Gm24394-201ENSMUST00000158141 123 ntBASIC4.29□□□□□ -1.72
Trim41Q5NCC3 Gm24076-201ENSMUST00000158179 94 ntBASIC4.29□□□□□ -1.72
Trim41Q5NCC3 Mir3471-1-201ENSMUST00000175139 131 ntBASIC4.29□□□□□ -1.72
Trim41Q5NCC3 Mir6379-201ENSMUST00000183392 115 ntBASIC4.29□□□□□ -1.72
Trim41Q5NCC3 Gm26062-201ENSMUST00000083379 107 ntBASIC4.29□□□□□ -1.72
Trim41Q5NCC3 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim41Q5NCC3 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim41Q5NCC3 Gm25322-201ENSMUST00000122556 104 ntBASIC4.28□□□□□ -1.72
Trim41Q5NCC3 Gm24212-201ENSMUST00000158258 132 ntBASIC4.28□□□□□ -1.72
Trim41Q5NCC3 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trim41Q5NCC3 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim41Q5NCC3 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Trim41Q5NCC3 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim41Q5NCC3 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim41Q5NCC3 Gm24199-201ENSMUST00000157808 136 ntBASIC4.27□□□□□ -1.73
Trim41Q5NCC3 Gm23726-201ENSMUST00000178937 67 ntBASIC4.27□□□□□ -1.73
Trim41Q5NCC3 Gm26398-201ENSMUST00000179015 127 ntBASIC4.27□□□□□ -1.73
Trim41Q5NCC3 Gm44478-201ENSMUST00000204875 114 ntBASIC4.27□□□□□ -1.73
Trim41Q5NCC3 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Trim41Q5NCC3 AC133934.2-201ENSMUST00000221729 4129 ntBASIC4.27□□□□□ -1.73
Trim41Q5NCC3 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim41Q5NCC3 Gm25160-201ENSMUST00000158914 102 ntBASIC4.26□□□□□ -1.73
Trim41Q5NCC3 Gm5900-201ENSMUST00000179862 375 ntBASIC4.26□□□□□ -1.73
Trim41Q5NCC3 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim41Q5NCC3 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim41Q5NCC3 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim41Q5NCC3 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim41Q5NCC3 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim41Q5NCC3 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim41Q5NCC3 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim41Q5NCC3 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim41Q5NCC3 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim41Q5NCC3 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim41Q5NCC3 Gm37428-201ENSMUST00000193886 137 ntBASIC4.26□□□□□ -1.73
Trim41Q5NCC3 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim41Q5NCC3 Gm45461-201ENSMUST00000211726 4535 ntBASIC4.26□□□□□ -1.73
Trim41Q5NCC3 Gm6185-201ENSMUST00000193379 3553 ntBASIC4.25□□□□□ -1.73
Trim41Q5NCC3 Gm23470-201ENSMUST00000157129 120 ntBASIC4.25□□□□□ -1.73
Trim41Q5NCC3 Mir669n-201ENSMUST00000158636 54 ntBASIC4.25□□□□□ -1.73
Trim41Q5NCC3 Gm23375-201ENSMUST00000175407 83 ntBASIC4.25□□□□□ -1.73
Trim41Q5NCC3 Mir30f-201ENSMUST00000196073 92 ntBASIC4.25□□□□□ -1.73
Trim41Q5NCC3 Gm25899-201ENSMUST00000082672 141 ntBASIC4.25□□□□□ -1.73
Trim41Q5NCC3 Gm37602-201ENSMUST00000195187 3310 ntBASIC4.24□□□□□ -1.73
Trim41Q5NCC3 Gm24342-201ENSMUST00000103907 104 ntBASIC4.24□□□□□ -1.73
Trim41Q5NCC3 n-R5s200-201ENSMUST00000104194 113 ntBASIC4.24□□□□□ -1.73
Trim41Q5NCC3 Gm9009-201ENSMUST00000117321 326 ntBASIC4.24□□□□□ -1.73
Trim41Q5NCC3 Gm24851-201ENSMUST00000158028 103 ntBASIC4.24□□□□□ -1.73
Trim41Q5NCC3 Gm25011-201ENSMUST00000158398 126 ntBASIC4.24□□□□□ -1.73
Trim41Q5NCC3 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC4.24□□□□□ -1.73
Trim41Q5NCC3 Gm16328-201ENSMUST00000126985 196 ntBASIC4.23□□□□□ -1.73
Trim41Q5NCC3 Gm26290-201ENSMUST00000158891 145 ntBASIC4.23□□□□□ -1.73
Trim41Q5NCC3 Gm22723-201ENSMUST00000083820 129 ntBASIC4.23□□□□□ -1.73
Trim41Q5NCC3 Gm20391-201ENSMUST00000174722 106 ntBASIC4.22□□□□□ -1.73
Trim41Q5NCC3 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Trim41Q5NCC3 Gm44903-201ENSMUST00000206840 130 ntBASIC4.21□□□□□ -1.74
Trim41Q5NCC3 Mir448-201ENSMUST00000083516 112 ntBASIC4.21□□□□□ -1.74
Trim41Q5NCC3 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Trim41Q5NCC3 Gm25170-201ENSMUST00000104191 129 ntBASIC4.2□□□□□ -1.74
Trim41Q5NCC3 Gm22416-201ENSMUST00000158590 88 ntBASIC4.2□□□□□ -1.74
Trim41Q5NCC3 Gm25119-201ENSMUST00000158815 88 ntBASIC4.2□□□□□ -1.74
Trim41Q5NCC3 Mir301b-201ENSMUST00000102333 97 ntBASIC4.19□□□□□ -1.74
Trim41Q5NCC3 Gm25094-201ENSMUST00000103992 131 ntBASIC4.19□□□□□ -1.74
Trim41Q5NCC3 Gm22858-201ENSMUST00000174972 76 ntBASIC4.19□□□□□ -1.74
Trim41Q5NCC3 Snora24-201ENSMUST00000174989 130 ntBASIC4.19□□□□□ -1.74
Trim41Q5NCC3 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC4.19□□□□□ -1.74
Trim41Q5NCC3 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Trim41Q5NCC3 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim41Q5NCC3 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim41Q5NCC3 Gm25750-201ENSMUST00000175483 112 ntBASIC4.18□□□□□ -1.74
Trim41Q5NCC3 Gm24575-201ENSMUST00000175502 77 ntBASIC4.18□□□□□ -1.74
Trim41Q5NCC3 Gm3852-201ENSMUST00000182781 264 ntBASIC4.18□□□□□ -1.74
Trim41Q5NCC3 Gm19118-201ENSMUST00000222554 98 ntBASIC4.18□□□□□ -1.74
Trim41Q5NCC3 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Trim41Q5NCC3 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trim41Q5NCC3 Gm23109-201ENSMUST00000116867 126 ntBASIC4.17□□□□□ -1.74
Trim41Q5NCC3 Gm24378-201ENSMUST00000122699 106 ntBASIC4.17□□□□□ -1.74
Trim41Q5NCC3 Mir6390-201ENSMUST00000184405 129 ntBASIC4.17□□□□□ -1.74
Trim41Q5NCC3 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim41Q5NCC3 Gm26213-201ENSMUST00000158582 110 ntBASIC4.16□□□□□ -1.74
Trim41Q5NCC3 Gm16561-201ENSMUST00000163001 192 ntBASIC4.16□□□□□ -1.74
Trim41Q5NCC3 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim41Q5NCC3 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Trim41Q5NCC3 Gm23656-201ENSMUST00000122626 112 ntBASIC4.15□□□□□ -1.75
Trim41Q5NCC3 Mir429-201ENSMUST00000083493 83 ntBASIC4.15□□□□□ -1.75
Trim41Q5NCC3 Mir20b-201ENSMUST00000102087 80 ntBASIC4.14□□□□□ -1.75
Trim41Q5NCC3 n-R5s187-201ENSMUST00000122769 111 ntBASIC4.13□□□□□ -1.75
Trim41Q5NCC3 Gm22517-201ENSMUST00000158265 136 ntBASIC4.13□□□□□ -1.75
Trim41Q5NCC3 Gm23005-201ENSMUST00000158950 136 ntBASIC4.13□□□□□ -1.75
Trim41Q5NCC3 AC129202.1-201ENSMUST00000224895 526 ntBASIC4.13□□□□□ -1.75
Trim41Q5NCC3 Gm25798-201ENSMUST00000082641 107 ntBASIC4.13□□□□□ -1.75
Trim41Q5NCC3 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC4.13□□□□□ -1.75
Trim41Q5NCC3 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
Trim41Q5NCC3 Gm27419-201ENSMUST00000184576 109 ntBASIC4.12□□□□□ -1.75
Trim41Q5NCC3 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Trim41Q5NCC3 Gm24399-201ENSMUST00000157869 74 ntBASIC4.11□□□□□ -1.75
Trim41Q5NCC3 Gm25014-201ENSMUST00000158401 103 ntBASIC4.11□□□□□ -1.75
Trim41Q5NCC3 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trim41Q5NCC3 Mir6369-201ENSMUST00000183772 106 ntBASIC4.11□□□□□ -1.75
Trim41Q5NCC3 Gm25832-201ENSMUST00000104140 130 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 130.9 ms