Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm28767-201ENSMUST00000188601 114 ntBASIC0.39□□□□□ -2.35
Usp28Q5I043 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.39□□□□□ -2.35
Usp28Q5I043 Gm26204-201ENSMUST00000082906 107 ntBASIC0.39□□□□□ -2.35
Usp28Q5I043 Mir488-201ENSMUST00000093595 109 ntBASIC0.39□□□□□ -2.35
Usp28Q5I043 Gm23989-201ENSMUST00000117030 66 ntBASIC0.38□□□□□ -2.35
Usp28Q5I043 Mir1899-201ENSMUST00000122798 96 ntBASIC0.38□□□□□ -2.35
Usp28Q5I043 Gm16550-201ENSMUST00000162550 126 ntBASIC0.38□□□□□ -2.35
Usp28Q5I043 Gm27465-201ENSMUST00000184290 91 ntBASIC0.38□□□□□ -2.35
Usp28Q5I043 Mir21b-201ENSMUST00000184317 108 ntBASIC0.38□□□□□ -2.35
Usp28Q5I043 Gm37624-201ENSMUST00000193751 219 ntBASIC0.38□□□□□ -2.35
Usp28Q5I043 Mir30f-201ENSMUST00000196073 92 ntBASIC0.38□□□□□ -2.35
Usp28Q5I043 Gm5002-201ENSMUST00000207145 223 ntBASIC0.38□□□□□ -2.35
Usp28Q5I043 Mir489-201ENSMUST00000093599 107 ntBASIC0.38□□□□□ -2.35
Usp28Q5I043 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.37□□□□□ -2.35
Usp28Q5I043 Gm15654-201ENSMUST00000152660 300 ntBASIC0.37□□□□□ -2.35
Usp28Q5I043 Mir6389-201ENSMUST00000183661 102 ntBASIC0.37□□□□□ -2.35
Usp28Q5I043 Gm44353-201ENSMUST00000200618 138 ntBASIC0.37□□□□□ -2.35
Usp28Q5I043 Gm44807-201ENSMUST00000206115 154 ntBASIC0.37□□□□□ -2.35
Usp28Q5I043 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Usp28Q5I043 Gm25814-201ENSMUST00000082754 107 ntBASIC0.37□□□□□ -2.35
Usp28Q5I043 Gm25416-201ENSMUST00000104221 107 ntBASIC0.36□□□□□ -2.35
Usp28Q5I043 Gm27934-201ENSMUST00000158795 63 ntBASIC0.36□□□□□ -2.35
Usp28Q5I043 Gm26285-201ENSMUST00000177923 107 ntBASIC0.36□□□□□ -2.35
Usp28Q5I043 Gm42623-201ENSMUST00000197225 379 ntBASIC0.36□□□□□ -2.35
Usp28Q5I043 Gm23622-201ENSMUST00000082460 107 ntBASIC0.36□□□□□ -2.35
Usp28Q5I043 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Usp28Q5I043 Gm22469-201ENSMUST00000104118 133 ntBASIC0.35□□□□□ -2.35
Usp28Q5I043 Gm14502-201ENSMUST00000118154 113 ntBASIC0.35□□□□□ -2.35
Usp28Q5I043 Gm25393-201ENSMUST00000157336 285 ntBASIC0.35□□□□□ -2.35
Usp28Q5I043 Gm24963-201ENSMUST00000157916 144 ntBASIC0.35□□□□□ -2.35
Usp28Q5I043 Gm23859-201ENSMUST00000158383 64 ntBASIC0.35□□□□□ -2.35
Usp28Q5I043 Gm26403-201ENSMUST00000158500 105 ntBASIC0.35□□□□□ -2.35
Usp28Q5I043 Mir100-201ENSMUST00000175270 80 ntBASIC0.35□□□□□ -2.35
Usp28Q5I043 Mir3969-201ENSMUST00000197106 92 ntBASIC0.35□□□□□ -2.35
Usp28Q5I043 Snord80-202ENSMUST00000199023 77 ntBASIC0.35□□□□□ -2.35
Usp28Q5I043 Gm44828-201ENSMUST00000203745 106 ntBASIC0.35□□□□□ -2.35
Usp28Q5I043 Gm44922-201ENSMUST00000206690 90 ntBASIC0.35□□□□□ -2.35
Usp28Q5I043 Gm23461-201ENSMUST00000083265 107 ntBASIC0.35□□□□□ -2.35
Usp28Q5I043 Gm26152-201ENSMUST00000157427 101 ntBASIC0.34□□□□□ -2.36
Usp28Q5I043 Gm26116-201ENSMUST00000175600 77 ntBASIC0.34□□□□□ -2.36
Usp28Q5I043 Gm27694-201ENSMUST00000184740 86 ntBASIC0.34□□□□□ -2.36
Usp28Q5I043 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.34□□□□□ -2.36
Usp28Q5I043 Gm10172-201ENSMUST00000085929 558 ntBASIC0.34□□□□□ -2.36
Usp28Q5I043 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Usp28Q5I043 Gm25610-201ENSMUST00000104016 129 ntBASIC0.33□□□□□ -2.36
Usp28Q5I043 Gm23126-201ENSMUST00000104260 134 ntBASIC0.33□□□□□ -2.36
Usp28Q5I043 Gm26303-201ENSMUST00000116845 119 ntBASIC0.33□□□□□ -2.36
Usp28Q5I043 Gm22348-201ENSMUST00000178674 79 ntBASIC0.33□□□□□ -2.36
Usp28Q5I043 Gm27792-201ENSMUST00000184031 115 ntBASIC0.33□□□□□ -2.36
Usp28Q5I043 Gm18665-201ENSMUST00000189783 270 ntBASIC0.33□□□□□ -2.36
Usp28Q5I043 Mir7657-201ENSMUST00000196051 57 ntBASIC0.33□□□□□ -2.36
Usp28Q5I043 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.33□□□□□ -2.36
Usp28Q5I043 Mir471-201ENSMUST00000093596 67 ntBASIC0.33□□□□□ -2.36
Usp28Q5I043 Mir1298-201ENSMUST00000116681 98 ntBASIC0.32□□□□□ -2.36
Usp28Q5I043 Gm23881-201ENSMUST00000116872 66 ntBASIC0.32□□□□□ -2.36
Usp28Q5I043 Gm22706-201ENSMUST00000157907 112 ntBASIC0.32□□□□□ -2.36
Usp28Q5I043 Gm27446-201ENSMUST00000183963 89 ntBASIC0.32□□□□□ -2.36
Usp28Q5I043 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.32□□□□□ -2.36
Usp28Q5I043 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.32□□□□□ -2.36
Usp28Q5I043 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.32□□□□□ -2.36
Usp28Q5I043 Snord60-201ENSMUST00000082834 78 ntBASIC0.32□□□□□ -2.36
Usp28Q5I043 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
Usp28Q5I043 Gm24238-201ENSMUST00000157792 98 ntBASIC0.31□□□□□ -2.36
Usp28Q5I043 Gm25653-201ENSMUST00000158473 138 ntBASIC0.31□□□□□ -2.36
Usp28Q5I043 Gm20409-201ENSMUST00000173457 130 ntBASIC0.31□□□□□ -2.36
Usp28Q5I043 Gm25300-201ENSMUST00000175284 84 ntBASIC0.31□□□□□ -2.36
Usp28Q5I043 Gm27993-201ENSMUST00000184362 85 ntBASIC0.31□□□□□ -2.36
Usp28Q5I043 Gm45541-201ENSMUST00000210443 54 ntBASIC0.31□□□□□ -2.36
Usp28Q5I043 Gm23301-201ENSMUST00000082713 65 ntBASIC0.31□□□□□ -2.36
Usp28Q5I043 Gm44489-201ENSMUST00000104619 97 ntBASIC0.3□□□□□ -2.36
Usp28Q5I043 Gm26158-201ENSMUST00000158973 119 ntBASIC0.3□□□□□ -2.36
Usp28Q5I043 Gm17020-201ENSMUST00000172274 274 ntBASIC0.3□□□□□ -2.36
Usp28Q5I043 Mir3094-201ENSMUST00000175121 64 ntBASIC0.3□□□□□ -2.36
Usp28Q5I043 Gm23917-201ENSMUST00000175256 98 ntBASIC0.3□□□□□ -2.36
Usp28Q5I043 Mir7010-201ENSMUST00000183464 63 ntBASIC0.3□□□□□ -2.36
Usp28Q5I043 Mir219b-201ENSMUST00000198317 65 ntBASIC0.3□□□□□ -2.36
Usp28Q5I043 Gm43381-201ENSMUST00000198553 165 ntBASIC0.3□□□□□ -2.36
Usp28Q5I043 Gm44490-201ENSMUST00000198566 127 ntBASIC0.3□□□□□ -2.36
Usp28Q5I043 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.3□□□□□ -2.36
Usp28Q5I043 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.3□□□□□ -2.36
Usp28Q5I043 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.29□□□□□ -2.36
Usp28Q5I043 Gm24232-201ENSMUST00000104314 132 ntBASIC0.29□□□□□ -2.36
Usp28Q5I043 Gm24590-201ENSMUST00000116699 119 ntBASIC0.29□□□□□ -2.36
Usp28Q5I043 Gm22520-201ENSMUST00000158269 129 ntBASIC0.29□□□□□ -2.36
Usp28Q5I043 Gm23857-201ENSMUST00000158379 111 ntBASIC0.29□□□□□ -2.36
Usp28Q5I043 Gm23209-201ENSMUST00000158667 110 ntBASIC0.29□□□□□ -2.36
Usp28Q5I043 Gm10548-202ENSMUST00000165672 272 ntBASIC0.29□□□□□ -2.36
Usp28Q5I043 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
Usp28Q5I043 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.28□□□□□ -2.36
Usp28Q5I043 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
Usp28Q5I043 Gm25329-201ENSMUST00000158041 126 ntBASIC0.28□□□□□ -2.36
Usp28Q5I043 Gm22606-201ENSMUST00000158290 103 ntBASIC0.28□□□□□ -2.36
Usp28Q5I043 Gm22983-201ENSMUST00000158308 104 ntBASIC0.28□□□□□ -2.36
Usp28Q5I043 Gm22431-201ENSMUST00000158545 107 ntBASIC0.28□□□□□ -2.36
Usp28Q5I043 Mir6342-201ENSMUST00000183870 125 ntBASIC0.28□□□□□ -2.36
Usp28Q5I043 Mir7079-201ENSMUST00000184697 69 ntBASIC0.28□□□□□ -2.36
Usp28Q5I043 Gm37746-201ENSMUST00000193249 198 ntBASIC0.28□□□□□ -2.36
Usp28Q5I043 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.28□□□□□ -2.36
Usp28Q5I043 Gm23303-201ENSMUST00000082714 152 ntBASIC0.28□□□□□ -2.36
Usp28Q5I043 Snord61-201ENSMUST00000083176 71 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 131.8 ms