Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm24461-201ENSMUST00000082735 103 ntBASIC-2.61□□□□□ -2.83
Ccdc88bQ4QRL3 Gm22004-201ENSMUST00000101884 107 ntBASIC-2.62□□□□□ -2.83
Ccdc88bQ4QRL3 Gm24701-201ENSMUST00000101946 105 ntBASIC-2.62□□□□□ -2.83
Ccdc88bQ4QRL3 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-2.62□□□□□ -2.83
Ccdc88bQ4QRL3 Gm24877-201ENSMUST00000158779 116 ntBASIC-2.62□□□□□ -2.83
Ccdc88bQ4QRL3 AC168880.1-201ENSMUST00000225113 707 ntBASIC-2.62□□□□□ -2.83
Ccdc88bQ4QRL3 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-2.62□□□□□ -2.83
Ccdc88bQ4QRL3 Gm42677-201ENSMUST00000196363 127 ntBASIC-2.63□□□□□ -2.83
Ccdc88bQ4QRL3 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC-2.63□□□□□ -2.83
Ccdc88bQ4QRL3 AC164297.5-201ENSMUST00000224365 198 ntBASIC-2.63□□□□□ -2.83
Ccdc88bQ4QRL3 AC167192.2-201ENSMUST00000224794 198 ntBASIC-2.63□□□□□ -2.83
Ccdc88bQ4QRL3 Gm25684-201ENSMUST00000083941 107 ntBASIC-2.63□□□□□ -2.83
Ccdc88bQ4QRL3 n-R5s155-201ENSMUST00000122531 113 ntBASIC-2.64□□□□□ -2.83
Ccdc88bQ4QRL3 AC098718.2-201ENSMUST00000226822 285 ntBASIC-2.64□□□□□ -2.83
Ccdc88bQ4QRL3 Gm25403-201ENSMUST00000082971 143 ntBASIC-2.64□□□□□ -2.83
Ccdc88bQ4QRL3 Gm24340-201ENSMUST00000104208 97 ntBASIC-2.65□□□□□ -2.83
Ccdc88bQ4QRL3 Gm23557-201ENSMUST00000157820 138 ntBASIC-2.65□□□□□ -2.83
Ccdc88bQ4QRL3 Gm23261-201ENSMUST00000158316 136 ntBASIC-2.65□□□□□ -2.83
Ccdc88bQ4QRL3 Gm27964-201ENSMUST00000185195 62 ntBASIC-2.65□□□□□ -2.83
Ccdc88bQ4QRL3 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-2.65□□□□□ -2.83
Ccdc88bQ4QRL3 Gm22508-201ENSMUST00000082772 110 ntBASIC-2.65□□□□□ -2.83
Ccdc88bQ4QRL3 Mir496a-201ENSMUST00000093627 79 ntBASIC-2.65□□□□□ -2.83
Ccdc88bQ4QRL3 Gm22791-201ENSMUST00000157232 145 ntBASIC-2.65□□□□□ -2.83
Ccdc88bQ4QRL3 Gm23725-201ENSMUST00000177876 107 ntBASIC-2.65□□□□□ -2.83
Ccdc88bQ4QRL3 Gm26398-201ENSMUST00000179015 127 ntBASIC-2.65□□□□□ -2.83
Ccdc88bQ4QRL3 AC124687.1-201ENSMUST00000221868 189 ntBASIC-2.65□□□□□ -2.83
Ccdc88bQ4QRL3 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC-2.66□□□□□ -2.84
Ccdc88bQ4QRL3 Gm23291-201ENSMUST00000175611 78 ntBASIC-2.66□□□□□ -2.84
Ccdc88bQ4QRL3 AC124569.1-201ENSMUST00000225932 101 ntBASIC-2.66□□□□□ -2.84
Ccdc88bQ4QRL3 Gm26124-201ENSMUST00000083359 108 ntBASIC-2.66□□□□□ -2.84
Ccdc88bQ4QRL3 Mir23a-201ENSMUST00000083677 75 ntBASIC-2.66□□□□□ -2.84
Ccdc88bQ4QRL3 Gm23941-201ENSMUST00000101953 107 ntBASIC-2.67□□□□□ -2.84
Ccdc88bQ4QRL3 Gm26000-201ENSMUST00000157991 107 ntBASIC-2.67□□□□□ -2.84
Ccdc88bQ4QRL3 Gm17054-201ENSMUST00000169811 259 ntBASIC-2.67□□□□□ -2.84
Ccdc88bQ4QRL3 Gm25874-201ENSMUST00000178030 79 ntBASIC-2.67□□□□□ -2.84
Ccdc88bQ4QRL3 Gm38183-201ENSMUST00000193189 205 ntBASIC-2.67□□□□□ -2.84
Ccdc88bQ4QRL3 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-2.68□□□□□ -2.84
Ccdc88bQ4QRL3 Gm37832-201ENSMUST00000118935 189 ntBASIC-2.68□□□□□ -2.84
Ccdc88bQ4QRL3 Gm22216-201ENSMUST00000157557 114 ntBASIC-2.68□□□□□ -2.84
Ccdc88bQ4QRL3 Gm24635-201ENSMUST00000122712 128 ntBASIC-2.69□□□□□ -2.84
Ccdc88bQ4QRL3 Gm25223-201ENSMUST00000158200 110 ntBASIC-2.69□□□□□ -2.84
Ccdc88bQ4QRL3 Gm24918-201ENSMUST00000083022 130 ntBASIC-2.69□□□□□ -2.84
Ccdc88bQ4QRL3 Gm23451-201ENSMUST00000083328 122 ntBASIC-2.69□□□□□ -2.84
Ccdc88bQ4QRL3 Gm13345-201ENSMUST00000121928 228 ntBASIC-2.7□□□□□ -2.84
Ccdc88bQ4QRL3 Mir351-201ENSMUST00000083569 99 ntBASIC-2.7□□□□□ -2.84
Ccdc88bQ4QRL3 Mir701-201ENSMUST00000102208 109 ntBASIC-2.71□□□□□ -2.84
Ccdc88bQ4QRL3 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.71□□□□□ -2.84
Ccdc88bQ4QRL3 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC-2.71□□□□□ -2.84
Ccdc88bQ4QRL3 Gm26228-201ENSMUST00000082512 107 ntBASIC-2.71□□□□□ -2.84
Ccdc88bQ4QRL3 Gm22597-201ENSMUST00000157602 80 ntBASIC-2.71□□□□□ -2.84
Ccdc88bQ4QRL3 Gm22464-201ENSMUST00000175273 64 ntBASIC-2.71□□□□□ -2.84
Ccdc88bQ4QRL3 Gm28917-201ENSMUST00000187294 237 ntBASIC-2.71□□□□□ -2.84
Ccdc88bQ4QRL3 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC-2.71□□□□□ -2.84
Ccdc88bQ4QRL3 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC-2.71□□□□□ -2.84
Ccdc88bQ4QRL3 Gm26500-201ENSMUST00000101867 106 ntBASIC-2.72□□□□□ -2.85
Ccdc88bQ4QRL3 Gm23494-201ENSMUST00000116830 126 ntBASIC-2.72□□□□□ -2.85
Ccdc88bQ4QRL3 Gm25828-201ENSMUST00000157087 95 ntBASIC-2.72□□□□□ -2.85
Ccdc88bQ4QRL3 Gm24717-201ENSMUST00000157522 124 ntBASIC-2.72□□□□□ -2.85
Ccdc88bQ4QRL3 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.72□□□□□ -2.85
Ccdc88bQ4QRL3 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC-2.72□□□□□ -2.85
Ccdc88bQ4QRL3 Gm43976-201ENSMUST00000203637 235 ntBASIC-2.72□□□□□ -2.85
Ccdc88bQ4QRL3 Mir743b-201ENSMUST00000104751 77 ntBASIC-2.73□□□□□ -2.85
Ccdc88bQ4QRL3 Gm23492-201ENSMUST00000116837 115 ntBASIC-2.73□□□□□ -2.85
Ccdc88bQ4QRL3 Gm42935-201ENSMUST00000202004 151 ntBASIC-2.73□□□□□ -2.85
Ccdc88bQ4QRL3 AL603630.1-201ENSMUST00000214781 147 ntBASIC-2.73□□□□□ -2.85
Ccdc88bQ4QRL3 Gm24254-201ENSMUST00000083702 104 ntBASIC-2.73□□□□□ -2.85
Ccdc88bQ4QRL3 Gm25563-201ENSMUST00000104603 74 ntBASIC-2.74□□□□□ -2.85
Ccdc88bQ4QRL3 Gm22850-201ENSMUST00000157714 82 ntBASIC-2.75□□□□□ -2.85
Ccdc88bQ4QRL3 Gm27490-201ENSMUST00000184754 128 ntBASIC-2.75□□□□□ -2.85
Ccdc88bQ4QRL3 Mir1969-201ENSMUST00000157623 94 ntBASIC-2.76□□□□□ -2.85
Ccdc88bQ4QRL3 Gm24418-201ENSMUST00000177597 79 ntBASIC-2.76□□□□□ -2.85
Ccdc88bQ4QRL3 Gm24639-201ENSMUST00000178518 79 ntBASIC-2.76□□□□□ -2.85
Ccdc88bQ4QRL3 Gm23076-201ENSMUST00000179082 79 ntBASIC-2.76□□□□□ -2.85
Ccdc88bQ4QRL3 Gm25077-201ENSMUST00000179157 79 ntBASIC-2.76□□□□□ -2.85
Ccdc88bQ4QRL3 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC-2.76□□□□□ -2.85
Ccdc88bQ4QRL3 AC192333.1-201ENSMUST00000224573 376 ntBASIC-2.76□□□□□ -2.85
Ccdc88bQ4QRL3 Snord61-201ENSMUST00000083176 71 ntBASIC-2.77□□□□□ -2.85
Ccdc88bQ4QRL3 Gm12785-201ENSMUST00000122052 172 ntBASIC-2.77□□□□□ -2.85
Ccdc88bQ4QRL3 Gm24775-201ENSMUST00000157377 99 ntBASIC-2.77□□□□□ -2.85
Ccdc88bQ4QRL3 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC-2.77□□□□□ -2.85
Ccdc88bQ4QRL3 Mir494-201ENSMUST00000093632 85 ntBASIC-2.77□□□□□ -2.85
Ccdc88bQ4QRL3 Gm25848-201ENSMUST00000116790 144 ntBASIC-2.78□□□□□ -2.86
Ccdc88bQ4QRL3 Gm22051-201ENSMUST00000117002 127 ntBASIC-2.78□□□□□ -2.86
Ccdc88bQ4QRL3 Gm22215-201ENSMUST00000157558 96 ntBASIC-2.78□□□□□ -2.86
Ccdc88bQ4QRL3 Gm25769-201ENSMUST00000158569 127 ntBASIC-2.78□□□□□ -2.86
Ccdc88bQ4QRL3 Gm22111-201ENSMUST00000178010 79 ntBASIC-2.79□□□□□ -2.86
Ccdc88bQ4QRL3 Gm23687-201ENSMUST00000178664 79 ntBASIC-2.79□□□□□ -2.86
Ccdc88bQ4QRL3 Gm24566-201ENSMUST00000179286 79 ntBASIC-2.79□□□□□ -2.86
Ccdc88bQ4QRL3 Gm23305-201ENSMUST00000179342 79 ntBASIC-2.79□□□□□ -2.86
Ccdc88bQ4QRL3 Gm26389-201ENSMUST00000179819 79 ntBASIC-2.79□□□□□ -2.86
Ccdc88bQ4QRL3 Gm22130-201ENSMUST00000179979 79 ntBASIC-2.79□□□□□ -2.86
Ccdc88bQ4QRL3 Gm22393-201ENSMUST00000180153 79 ntBASIC-2.79□□□□□ -2.86
Ccdc88bQ4QRL3 Gm25085-201ENSMUST00000180298 79 ntBASIC-2.79□□□□□ -2.86
Ccdc88bQ4QRL3 Gm25781-201ENSMUST00000122527 84 ntBASIC-2.8□□□□□ -2.86
Ccdc88bQ4QRL3 Gm23640-201ENSMUST00000157860 104 ntBASIC-2.8□□□□□ -2.86
Ccdc88bQ4QRL3 Gm23759-201ENSMUST00000158351 268 ntBASIC-2.8□□□□□ -2.86
Ccdc88bQ4QRL3 Gm43324-201ENSMUST00000197482 289 ntBASIC-2.8□□□□□ -2.86
Ccdc88bQ4QRL3 Gm45403-201ENSMUST00000209453 276 ntBASIC-2.81□□□□□ -2.86
Ccdc88bQ4QRL3 AC132615.1-201ENSMUST00000213873 255 ntBASIC-2.81□□□□□ -2.86
Ccdc88bQ4QRL3 Gm16362-201ENSMUST00000135189 214 ntBASIC-2.82□□□□□ -2.86
Retrieved 100 of 76,532 protein–RNA pairs in 183.4 ms