Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Snord61-201ENSMUST00000083176 71 ntBASIC0.65□□□□□ -2.31
Trafd1Q3UDK1 Mir500-201ENSMUST00000093600 92 ntBASIC0.65□□□□□ -2.31
Trafd1Q3UDK1 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Trafd1Q3UDK1 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Trafd1Q3UDK1 Gm25599-201ENSMUST00000157816 103 ntBASIC0.64□□□□□ -2.31
Trafd1Q3UDK1 Gm24750-201ENSMUST00000157843 104 ntBASIC0.64□□□□□ -2.31
Trafd1Q3UDK1 Gm24500-201ENSMUST00000158447 124 ntBASIC0.64□□□□□ -2.31
Trafd1Q3UDK1 Mir1933-201ENSMUST00000158930 88 ntBASIC0.64□□□□□ -2.31
Trafd1Q3UDK1 Gm22699-201ENSMUST00000175376 105 ntBASIC0.64□□□□□ -2.31
Trafd1Q3UDK1 Gm18665-201ENSMUST00000189783 270 ntBASIC0.64□□□□□ -2.31
Trafd1Q3UDK1 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
Trafd1Q3UDK1 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Trafd1Q3UDK1 Gm22973-201ENSMUST00000083298 191 ntBASIC0.64□□□□□ -2.31
Trafd1Q3UDK1 Mir33-201ENSMUST00000083531 69 ntBASIC0.64□□□□□ -2.31
Trafd1Q3UDK1 Gm22139-201ENSMUST00000158747 105 ntBASIC0.63□□□□□ -2.31
Trafd1Q3UDK1 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.63□□□□□ -2.31
Trafd1Q3UDK1 Gm23303-201ENSMUST00000082714 152 ntBASIC0.63□□□□□ -2.31
Trafd1Q3UDK1 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
Trafd1Q3UDK1 Gm24232-201ENSMUST00000104314 132 ntBASIC0.62□□□□□ -2.31
Trafd1Q3UDK1 Snord72-201ENSMUST00000104549 81 ntBASIC0.62□□□□□ -2.31
Trafd1Q3UDK1 Gm44489-201ENSMUST00000104619 97 ntBASIC0.62□□□□□ -2.31
Trafd1Q3UDK1 Gm25980-201ENSMUST00000157176 218 ntBASIC0.62□□□□□ -2.31
Trafd1Q3UDK1 Gm22431-201ENSMUST00000158545 107 ntBASIC0.62□□□□□ -2.31
Trafd1Q3UDK1 Gm25716-201ENSMUST00000158628 104 ntBASIC0.62□□□□□ -2.31
Trafd1Q3UDK1 Gm24547-201ENSMUST00000158649 149 ntBASIC0.62□□□□□ -2.31
Trafd1Q3UDK1 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
Trafd1Q3UDK1 Gm24030-201ENSMUST00000083931 164 ntBASIC0.62□□□□□ -2.31
Trafd1Q3UDK1 Gm26338-201ENSMUST00000102372 110 ntBASIC0.61□□□□□ -2.31
Trafd1Q3UDK1 Scarna9-201ENSMUST00000104318 70 ntBASIC0.61□□□□□ -2.31
Trafd1Q3UDK1 Gm22105-201ENSMUST00000116734 116 ntBASIC0.61□□□□□ -2.31
Trafd1Q3UDK1 Gm26274-201ENSMUST00000157103 321 ntBASIC0.61□□□□□ -2.31
Trafd1Q3UDK1 Gm24728-201ENSMUST00000158226 125 ntBASIC0.61□□□□□ -2.31
Trafd1Q3UDK1 Mir6390-201ENSMUST00000184405 129 ntBASIC0.61□□□□□ -2.31
Trafd1Q3UDK1 Gm43381-201ENSMUST00000198553 165 ntBASIC0.61□□□□□ -2.31
Trafd1Q3UDK1 Gm44488-201ENSMUST00000199467 119 ntBASIC0.61□□□□□ -2.31
Trafd1Q3UDK1 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.61□□□□□ -2.31
Trafd1Q3UDK1 Gm14039-201ENSMUST00000118705 101 ntBASIC0.6□□□□□ -2.31
Trafd1Q3UDK1 Gm16265-201ENSMUST00000134558 108 ntBASIC0.6□□□□□ -2.31
Trafd1Q3UDK1 Gm23605-201ENSMUST00000157255 127 ntBASIC0.6□□□□□ -2.31
Trafd1Q3UDK1 Gm24476-201ENSMUST00000157437 131 ntBASIC0.6□□□□□ -2.31
Trafd1Q3UDK1 Gm24575-201ENSMUST00000175502 77 ntBASIC0.6□□□□□ -2.31
Trafd1Q3UDK1 Gm28435-201ENSMUST00000185496 108 ntBASIC0.6□□□□□ -2.31
Trafd1Q3UDK1 Gm23445-201ENSMUST00000082800 107 ntBASIC0.6□□□□□ -2.31
Trafd1Q3UDK1 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.59□□□□□ -2.31
Trafd1Q3UDK1 Gm23126-201ENSMUST00000104260 134 ntBASIC0.59□□□□□ -2.31
Trafd1Q3UDK1 Gm22373-201ENSMUST00000104584 89 ntBASIC0.59□□□□□ -2.31
Trafd1Q3UDK1 Gm11644-201ENSMUST00000119735 150 ntBASIC0.59□□□□□ -2.31
Trafd1Q3UDK1 Gm22815-201ENSMUST00000157451 62 ntBASIC0.59□□□□□ -2.31
Trafd1Q3UDK1 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.59□□□□□ -2.31
Trafd1Q3UDK1 Gm20409-201ENSMUST00000173457 130 ntBASIC0.59□□□□□ -2.31
Trafd1Q3UDK1 Mir3094-201ENSMUST00000175121 64 ntBASIC0.59□□□□□ -2.31
Trafd1Q3UDK1 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.59□□□□□ -2.31
Trafd1Q3UDK1 Gm25138-201ENSMUST00000083248 136 ntBASIC0.59□□□□□ -2.31
Trafd1Q3UDK1 Gm24258-201ENSMUST00000083739 133 ntBASIC0.59□□□□□ -2.31
Trafd1Q3UDK1 Snord69-201ENSMUST00000104024 80 ntBASIC0.58□□□□□ -2.32
Trafd1Q3UDK1 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
Trafd1Q3UDK1 Gm15654-201ENSMUST00000152660 300 ntBASIC0.58□□□□□ -2.32
Trafd1Q3UDK1 Gm23783-201ENSMUST00000157941 102 ntBASIC0.58□□□□□ -2.32
Trafd1Q3UDK1 Gm24678-201ENSMUST00000158756 104 ntBASIC0.58□□□□□ -2.32
Trafd1Q3UDK1 Gm25444-201ENSMUST00000158999 113 ntBASIC0.58□□□□□ -2.32
Trafd1Q3UDK1 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.58□□□□□ -2.32
Trafd1Q3UDK1 Mir3969-201ENSMUST00000197106 92 ntBASIC0.58□□□□□ -2.32
Trafd1Q3UDK1 Gm44807-201ENSMUST00000206115 154 ntBASIC0.58□□□□□ -2.32
Trafd1Q3UDK1 Mir216a-201ENSMUST00000083605 72 ntBASIC0.58□□□□□ -2.32
Trafd1Q3UDK1 Gm23947-201ENSMUST00000093636 107 ntBASIC0.58□□□□□ -2.32
Trafd1Q3UDK1 Gm23320-201ENSMUST00000104462 127 ntBASIC0.57□□□□□ -2.32
Trafd1Q3UDK1 Gm25787-201ENSMUST00000104709 92 ntBASIC0.57□□□□□ -2.32
Trafd1Q3UDK1 Mir1899-201ENSMUST00000122798 96 ntBASIC0.57□□□□□ -2.32
Trafd1Q3UDK1 Mir1966-201ENSMUST00000158807 108 ntBASIC0.57□□□□□ -2.32
Trafd1Q3UDK1 Gm27446-201ENSMUST00000183963 89 ntBASIC0.57□□□□□ -2.32
Trafd1Q3UDK1 Gm28767-201ENSMUST00000188601 114 ntBASIC0.57□□□□□ -2.32
Trafd1Q3UDK1 Mir30f-201ENSMUST00000196073 92 ntBASIC0.57□□□□□ -2.32
Trafd1Q3UDK1 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.57□□□□□ -2.32
Trafd1Q3UDK1 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.57□□□□□ -2.32
Trafd1Q3UDK1 Gm25401-201ENSMUST00000082975 106 ntBASIC0.57□□□□□ -2.32
Trafd1Q3UDK1 Snord33-201ENSMUST00000083694 84 ntBASIC0.57□□□□□ -2.32
Trafd1Q3UDK1 Gm6272-201ENSMUST00000121256 171 ntBASIC0.56□□□□□ -2.32
Trafd1Q3UDK1 Gm24747-201ENSMUST00000157835 87 ntBASIC0.56□□□□□ -2.32
Trafd1Q3UDK1 Gm24106-201ENSMUST00000175498 127 ntBASIC0.56□□□□□ -2.32
Trafd1Q3UDK1 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.56□□□□□ -2.32
Trafd1Q3UDK1 DQ267101-201ENSMUST00000082562 73 ntBASIC0.56□□□□□ -2.32
Trafd1Q3UDK1 Gm22753-201ENSMUST00000083657 107 ntBASIC0.56□□□□□ -2.32
Trafd1Q3UDK1 Mir362-201ENSMUST00000093592 65 ntBASIC0.56□□□□□ -2.32
Trafd1Q3UDK1 Gm44211-201ENSMUST00000204867 145 ntBASIC0.55□□□□□ -2.32
Trafd1Q3UDK1 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.55□□□□□ -2.32
Trafd1Q3UDK1 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.55□□□□□ -2.32
Trafd1Q3UDK1 Gm25610-201ENSMUST00000104016 129 ntBASIC0.54□□□□□ -2.32
Trafd1Q3UDK1 Gm25060-201ENSMUST00000157374 130 ntBASIC0.54□□□□□ -2.32
Trafd1Q3UDK1 Gm24238-201ENSMUST00000157792 98 ntBASIC0.54□□□□□ -2.32
Trafd1Q3UDK1 Gm23853-201ENSMUST00000158375 104 ntBASIC0.54□□□□□ -2.32
Trafd1Q3UDK1 Gm23337-201ENSMUST00000158959 118 ntBASIC0.54□□□□□ -2.32
Trafd1Q3UDK1 Gm16550-201ENSMUST00000162550 126 ntBASIC0.54□□□□□ -2.32
Trafd1Q3UDK1 Gm26236-201ENSMUST00000175536 137 ntBASIC0.54□□□□□ -2.32
Trafd1Q3UDK1 Gm26285-201ENSMUST00000177923 107 ntBASIC0.54□□□□□ -2.32
Trafd1Q3UDK1 Gm27289-201ENSMUST00000183341 82 ntBASIC0.54□□□□□ -2.32
Trafd1Q3UDK1 Mir7657-201ENSMUST00000196051 57 ntBASIC0.54□□□□□ -2.32
Trafd1Q3UDK1 Gm18502-201ENSMUST00000218679 199 ntBASIC0.54□□□□□ -2.32
Trafd1Q3UDK1 Gm23622-201ENSMUST00000082460 107 ntBASIC0.54□□□□□ -2.32
Trafd1Q3UDK1 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.54□□□□□ -2.32
Trafd1Q3UDK1 Mir30a-201ENSMUST00000083471 71 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms