Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm25006-201ENSMUST00000083813 107 ntBASIC1.78□□□□□ -2.12
Ddb1Q3U1J4 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Ddb1Q3U1J4 Mir654-201ENSMUST00000104787 84 ntBASIC1.77□□□□□ -2.13
Ddb1Q3U1J4 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Ddb1Q3U1J4 Gm22509-201ENSMUST00000082775 107 ntBASIC1.77□□□□□ -2.13
Ddb1Q3U1J4 Gm23644-201ENSMUST00000157856 77 ntBASIC1.76□□□□□ -2.13
Ddb1Q3U1J4 Gm27248-201ENSMUST00000184004 166 ntBASIC1.76□□□□□ -2.13
Ddb1Q3U1J4 Mir7063-201ENSMUST00000184158 91 ntBASIC1.76□□□□□ -2.13
Ddb1Q3U1J4 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC1.76□□□□□ -2.13
Ddb1Q3U1J4 Gm23299-201ENSMUST00000082708 79 ntBASIC1.76□□□□□ -2.13
Ddb1Q3U1J4 Gm25684-201ENSMUST00000083941 107 ntBASIC1.76□□□□□ -2.13
Ddb1Q3U1J4 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.75□□□□□ -2.13
Ddb1Q3U1J4 Gm22999-201ENSMUST00000157082 88 ntBASIC1.75□□□□□ -2.13
Ddb1Q3U1J4 Gm22490-201ENSMUST00000157188 119 ntBASIC1.75□□□□□ -2.13
Ddb1Q3U1J4 Gm22386-201ENSMUST00000158192 129 ntBASIC1.75□□□□□ -2.13
Ddb1Q3U1J4 Gm24880-201ENSMUST00000158776 85 ntBASIC1.75□□□□□ -2.13
Ddb1Q3U1J4 Gm23419-201ENSMUST00000175523 84 ntBASIC1.75□□□□□ -2.13
Ddb1Q3U1J4 Snord1a-201ENSMUST00000083160 74 ntBASIC1.75□□□□□ -2.13
Ddb1Q3U1J4 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.74□□□□□ -2.13
Ddb1Q3U1J4 Gm22196-201ENSMUST00000116865 109 ntBASIC1.74□□□□□ -2.13
Ddb1Q3U1J4 Gm27446-201ENSMUST00000183963 89 ntBASIC1.74□□□□□ -2.13
Ddb1Q3U1J4 Gm23140-201ENSMUST00000082487 107 ntBASIC1.74□□□□□ -2.13
Ddb1Q3U1J4 Gm25541-201ENSMUST00000116888 126 ntBASIC1.73□□□□□ -2.13
Ddb1Q3U1J4 Gm24894-201ENSMUST00000122744 118 ntBASIC1.73□□□□□ -2.13
Ddb1Q3U1J4 Gm25768-201ENSMUST00000158570 98 ntBASIC1.73□□□□□ -2.13
Ddb1Q3U1J4 Gm24677-201ENSMUST00000158755 150 ntBASIC1.73□□□□□ -2.13
Ddb1Q3U1J4 Gm22929-201ENSMUST00000175517 107 ntBASIC1.73□□□□□ -2.13
Ddb1Q3U1J4 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Ddb1Q3U1J4 Gm42795-201ENSMUST00000198847 76 ntBASIC1.73□□□□□ -2.13
Ddb1Q3U1J4 AC126939.1-201ENSMUST00000224943 226 ntBASIC1.73□□□□□ -2.13
Ddb1Q3U1J4 Mir450b-201ENSMUST00000102095 82 ntBASIC1.72□□□□□ -2.13
Ddb1Q3U1J4 Gm25838-201ENSMUST00000158920 120 ntBASIC1.72□□□□□ -2.13
Ddb1Q3U1J4 Gm25444-201ENSMUST00000158999 113 ntBASIC1.72□□□□□ -2.13
Ddb1Q3U1J4 Gm16539-201ENSMUST00000160086 327 ntBASIC1.72□□□□□ -2.13
Ddb1Q3U1J4 Gm25646-201ENSMUST00000178527 79 ntBASIC1.72□□□□□ -2.13
Ddb1Q3U1J4 Gm26038-201ENSMUST00000158151 106 ntBASIC1.71□□□□□ -2.14
Ddb1Q3U1J4 Gm22200-201ENSMUST00000158614 67 ntBASIC1.71□□□□□ -2.14
Ddb1Q3U1J4 AC136457.1-201ENSMUST00000224195 156 ntBASIC1.71□□□□□ -2.14
Ddb1Q3U1J4 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.71□□□□□ -2.14
Ddb1Q3U1J4 Mir369-201ENSMUST00000083627 79 ntBASIC1.71□□□□□ -2.14
Ddb1Q3U1J4 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Ddb1Q3U1J4 Gm23106-201ENSMUST00000157554 101 ntBASIC1.7□□□□□ -2.14
Ddb1Q3U1J4 Gm25715-201ENSMUST00000158627 125 ntBASIC1.7□□□□□ -2.14
Ddb1Q3U1J4 Mir411-201ENSMUST00000083543 82 ntBASIC1.7□□□□□ -2.14
Ddb1Q3U1J4 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.7□□□□□ -2.14
Ddb1Q3U1J4 Mir653-201ENSMUST00000102402 85 ntBASIC1.69□□□□□ -2.14
Ddb1Q3U1J4 Gm25680-201ENSMUST00000116917 126 ntBASIC1.69□□□□□ -2.14
Ddb1Q3U1J4 Gm22635-201ENSMUST00000116962 126 ntBASIC1.69□□□□□ -2.14
Ddb1Q3U1J4 Gm22845-201ENSMUST00000157712 104 ntBASIC1.69□□□□□ -2.14
Ddb1Q3U1J4 Gm23375-201ENSMUST00000175407 83 ntBASIC1.69□□□□□ -2.14
Ddb1Q3U1J4 Mir6351-201ENSMUST00000183826 99 ntBASIC1.69□□□□□ -2.14
Ddb1Q3U1J4 Gm45268-201ENSMUST00000210046 370 ntBASIC1.69□□□□□ -2.14
Ddb1Q3U1J4 Gm23507-201ENSMUST00000083078 107 ntBASIC1.69□□□□□ -2.14
Ddb1Q3U1J4 Gm22055-201ENSMUST00000083388 107 ntBASIC1.69□□□□□ -2.14
Ddb1Q3U1J4 Gm24942-201ENSMUST00000158328 114 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm25241-201ENSMUST00000174909 84 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Snora24-201ENSMUST00000174989 130 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm26217-201ENSMUST00000175212 84 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm22802-201ENSMUST00000175621 89 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm25098-201ENSMUST00000177580 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm23356-201ENSMUST00000177610 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm24027-201ENSMUST00000177611 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm22511-201ENSMUST00000177628 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm22630-201ENSMUST00000177781 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm23560-201ENSMUST00000177782 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm25462-201ENSMUST00000177833 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm26059-201ENSMUST00000177865 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm22255-201ENSMUST00000177933 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm25146-201ENSMUST00000177976 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm25523-201ENSMUST00000178044 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm24585-201ENSMUST00000178104 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm22627-201ENSMUST00000178127 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm22912-201ENSMUST00000178242 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm24866-201ENSMUST00000178338 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm22524-201ENSMUST00000178357 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm25710-201ENSMUST00000178367 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm23575-201ENSMUST00000178406 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm24872-201ENSMUST00000178434 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm22449-201ENSMUST00000178924 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm24702-201ENSMUST00000178965 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm24206-201ENSMUST00000179011 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm24528-201ENSMUST00000179164 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm22909-201ENSMUST00000179190 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm26334-201ENSMUST00000179403 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm25463-201ENSMUST00000179405 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm25742-201ENSMUST00000179530 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm25209-201ENSMUST00000179576 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm26392-201ENSMUST00000179661 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm25230-201ENSMUST00000179740 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm26434-201ENSMUST00000179778 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm25741-201ENSMUST00000179825 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm24759-201ENSMUST00000179827 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm24219-201ENSMUST00000179861 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Mir7663-201ENSMUST00000183950 61 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm28256-201ENSMUST00000188953 139 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm28559-201ENSMUST00000190532 139 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 mt-Tf-201ENSMUST00000082387 68 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 mt-Ts2-201ENSMUST00000082416 59 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Gm23254-201ENSMUST00000097244 79 ntBASIC1.68□□□□□ -2.14
Ddb1Q3U1J4 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 136.2 ms