Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Gm14884-201ENSMUST00000120456 196 ntBASIC0.37□□□□□ -2.35
Ctdnep1Q3TP92 Mir1899-201ENSMUST00000122798 96 ntBASIC0.37□□□□□ -2.35
Ctdnep1Q3TP92 Gm23859-201ENSMUST00000158383 64 ntBASIC0.37□□□□□ -2.35
Ctdnep1Q3TP92 Gm26403-201ENSMUST00000158500 105 ntBASIC0.37□□□□□ -2.35
Ctdnep1Q3TP92 Gm24549-201ENSMUST00000158647 139 ntBASIC0.37□□□□□ -2.35
Ctdnep1Q3TP92 Gm23209-201ENSMUST00000158667 110 ntBASIC0.37□□□□□ -2.35
Ctdnep1Q3TP92 Gm17020-201ENSMUST00000172274 274 ntBASIC0.37□□□□□ -2.35
Ctdnep1Q3TP92 Gm37624-201ENSMUST00000193751 219 ntBASIC0.37□□□□□ -2.35
Ctdnep1Q3TP92 Gm44922-201ENSMUST00000206690 90 ntBASIC0.37□□□□□ -2.35
Ctdnep1Q3TP92 Mir30a-201ENSMUST00000083471 71 ntBASIC0.37□□□□□ -2.35
Ctdnep1Q3TP92 Gm22759-201ENSMUST00000102276 96 ntBASIC0.36□□□□□ -2.35
Ctdnep1Q3TP92 Gm14502-201ENSMUST00000118154 113 ntBASIC0.36□□□□□ -2.35
Ctdnep1Q3TP92 Gm6985-201ENSMUST00000121255 271 ntBASIC0.36□□□□□ -2.35
Ctdnep1Q3TP92 Gm23852-201ENSMUST00000158376 77 ntBASIC0.36□□□□□ -2.35
Ctdnep1Q3TP92 Gm22466-201ENSMUST00000175278 69 ntBASIC0.36□□□□□ -2.35
Ctdnep1Q3TP92 Gm24575-201ENSMUST00000175502 77 ntBASIC0.36□□□□□ -2.35
Ctdnep1Q3TP92 Gm5002-201ENSMUST00000207145 223 ntBASIC0.36□□□□□ -2.35
Ctdnep1Q3TP92 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Ctdnep1Q3TP92 Gm25416-201ENSMUST00000104221 107 ntBASIC0.35□□□□□ -2.35
Ctdnep1Q3TP92 Mir1298-201ENSMUST00000116681 98 ntBASIC0.35□□□□□ -2.35
Ctdnep1Q3TP92 Gm22815-201ENSMUST00000157451 62 ntBASIC0.35□□□□□ -2.35
Ctdnep1Q3TP92 Gm26468-201ENSMUST00000158644 106 ntBASIC0.35□□□□□ -2.35
Ctdnep1Q3TP92 Gm28767-201ENSMUST00000188601 114 ntBASIC0.35□□□□□ -2.35
Ctdnep1Q3TP92 Gm44807-201ENSMUST00000206115 154 ntBASIC0.35□□□□□ -2.35
Ctdnep1Q3TP92 Gm10172-201ENSMUST00000085929 558 ntBASIC0.35□□□□□ -2.35
Ctdnep1Q3TP92 Mir471-201ENSMUST00000093596 67 ntBASIC0.35□□□□□ -2.35
Ctdnep1Q3TP92 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.34□□□□□ -2.35
Ctdnep1Q3TP92 Gm26303-201ENSMUST00000116845 119 ntBASIC0.34□□□□□ -2.36
Ctdnep1Q3TP92 Gm23989-201ENSMUST00000117030 66 ntBASIC0.34□□□□□ -2.36
Ctdnep1Q3TP92 Gm15654-201ENSMUST00000152660 300 ntBASIC0.34□□□□□ -2.36
Ctdnep1Q3TP92 Gm26152-201ENSMUST00000157427 101 ntBASIC0.34□□□□□ -2.36
Ctdnep1Q3TP92 Gm27934-201ENSMUST00000158795 63 ntBASIC0.34□□□□□ -2.36
Ctdnep1Q3TP92 Gm22348-201ENSMUST00000178674 79 ntBASIC0.34□□□□□ -2.36
Ctdnep1Q3TP92 Mir6389-201ENSMUST00000183661 102 ntBASIC0.34□□□□□ -2.36
Ctdnep1Q3TP92 Gm27792-201ENSMUST00000184031 115 ntBASIC0.34□□□□□ -2.36
Ctdnep1Q3TP92 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.34□□□□□ -2.36
Ctdnep1Q3TP92 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.34□□□□□ -2.36
Ctdnep1Q3TP92 Gm24527-201ENSMUST00000082920 107 ntBASIC0.34□□□□□ -2.36
Ctdnep1Q3TP92 Gm24457-201ENSMUST00000083196 105 ntBASIC0.34□□□□□ -2.36
Ctdnep1Q3TP92 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Ctdnep1Q3TP92 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.33□□□□□ -2.36
Ctdnep1Q3TP92 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.33□□□□□ -2.36
Ctdnep1Q3TP92 Gm22989-201ENSMUST00000158313 86 ntBASIC0.33□□□□□ -2.36
Ctdnep1Q3TP92 Gm20409-201ENSMUST00000173457 130 ntBASIC0.33□□□□□ -2.36
Ctdnep1Q3TP92 Gm22621-201ENSMUST00000179678 74 ntBASIC0.33□□□□□ -2.36
Ctdnep1Q3TP92 Mir219b-201ENSMUST00000198317 65 ntBASIC0.33□□□□□ -2.36
Ctdnep1Q3TP92 Snord61-201ENSMUST00000083176 71 ntBASIC0.33□□□□□ -2.36
Ctdnep1Q3TP92 Mir200b-201ENSMUST00000083615 70 ntBASIC0.33□□□□□ -2.36
Ctdnep1Q3TP92 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.33□□□□□ -2.36
Ctdnep1Q3TP92 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
Ctdnep1Q3TP92 Gm25496-201ENSMUST00000104430 120 ntBASIC0.32□□□□□ -2.36
Ctdnep1Q3TP92 Gm25565-201ENSMUST00000104605 105 ntBASIC0.32□□□□□ -2.36
Ctdnep1Q3TP92 Gm23881-201ENSMUST00000116872 66 ntBASIC0.32□□□□□ -2.36
Ctdnep1Q3TP92 Gm24963-201ENSMUST00000157916 144 ntBASIC0.32□□□□□ -2.36
Ctdnep1Q3TP92 Mir30f-201ENSMUST00000196073 92 ntBASIC0.32□□□□□ -2.36
Ctdnep1Q3TP92 Gm43944-201ENSMUST00000205220 120 ntBASIC0.32□□□□□ -2.36
Ctdnep1Q3TP92 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.32□□□□□ -2.36
Ctdnep1Q3TP92 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.32□□□□□ -2.36
Ctdnep1Q3TP92 Snord60-201ENSMUST00000082834 78 ntBASIC0.32□□□□□ -2.36
Ctdnep1Q3TP92 Mir466h-201ENSMUST00000104748 81 ntBASIC0.31□□□□□ -2.36
Ctdnep1Q3TP92 Mir3969-201ENSMUST00000197106 92 ntBASIC0.31□□□□□ -2.36
Ctdnep1Q3TP92 Gm25814-201ENSMUST00000082754 107 ntBASIC0.31□□□□□ -2.36
Ctdnep1Q3TP92 Gm23320-201ENSMUST00000104462 127 ntBASIC0.3□□□□□ -2.36
Ctdnep1Q3TP92 Gm44489-201ENSMUST00000104619 97 ntBASIC0.3□□□□□ -2.36
Ctdnep1Q3TP92 Gm25980-201ENSMUST00000157176 218 ntBASIC0.3□□□□□ -2.36
Ctdnep1Q3TP92 Gm22706-201ENSMUST00000157907 112 ntBASIC0.3□□□□□ -2.36
Ctdnep1Q3TP92 Gm22967-201ENSMUST00000157956 239 ntBASIC0.3□□□□□ -2.36
Ctdnep1Q3TP92 Gm24131-201ENSMUST00000158539 107 ntBASIC0.3□□□□□ -2.36
Ctdnep1Q3TP92 Mir3094-201ENSMUST00000175121 64 ntBASIC0.3□□□□□ -2.36
Ctdnep1Q3TP92 Gm23917-201ENSMUST00000175256 98 ntBASIC0.3□□□□□ -2.36
Ctdnep1Q3TP92 Gm27717-201ENSMUST00000183933 151 ntBASIC0.3□□□□□ -2.36
Ctdnep1Q3TP92 Gm18665-201ENSMUST00000189783 270 ntBASIC0.3□□□□□ -2.36
Ctdnep1Q3TP92 Gm37746-201ENSMUST00000193249 198 ntBASIC0.3□□□□□ -2.36
Ctdnep1Q3TP92 Gm23303-201ENSMUST00000082714 152 ntBASIC0.3□□□□□ -2.36
Ctdnep1Q3TP92 Gm25136-201ENSMUST00000083253 115 ntBASIC0.3□□□□□ -2.36
Ctdnep1Q3TP92 Gm23126-201ENSMUST00000104260 134 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 Gm25316-201ENSMUST00000116826 118 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 Gm25393-201ENSMUST00000157336 285 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 Gm24238-201ENSMUST00000157792 98 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 Gm25329-201ENSMUST00000158041 126 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 Gm23857-201ENSMUST00000158379 111 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 Gm22431-201ENSMUST00000158545 107 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 Gm24054-201ENSMUST00000158619 105 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 Gm16550-201ENSMUST00000162550 126 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 Gm10548-202ENSMUST00000165672 272 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 Mir100-201ENSMUST00000175270 80 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 Gm25300-201ENSMUST00000175284 84 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 Gm26116-201ENSMUST00000175600 77 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 Gm26097-201ENSMUST00000179642 93 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 Gm27446-201ENSMUST00000183963 89 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 Mir7657-201ENSMUST00000196051 57 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 Gm43381-201ENSMUST00000198553 165 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 Gm44338-201ENSMUST00000198614 110 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 Gm44853-201ENSMUST00000209070 250 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.29□□□□□ -2.36
Ctdnep1Q3TP92 Gm25610-201ENSMUST00000104016 129 ntBASIC0.28□□□□□ -2.36
Ctdnep1Q3TP92 Gm24232-201ENSMUST00000104314 132 ntBASIC0.28□□□□□ -2.36
Ctdnep1Q3TP92 Gm22520-201ENSMUST00000158269 129 ntBASIC0.28□□□□□ -2.36
Ctdnep1Q3TP92 Gm26158-201ENSMUST00000158973 119 ntBASIC0.28□□□□□ -2.36
Ctdnep1Q3TP92 Gm23864-201ENSMUST00000177607 107 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 149.5 ms