Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm44807-201ENSMUST00000206115 154 ntBASIC1.79□□□□□ -2.12
Usp39Q3TIX9 Mir300-201ENSMUST00000083485 79 ntBASIC1.79□□□□□ -2.12
Usp39Q3TIX9 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.78□□□□□ -2.12
Usp39Q3TIX9 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.78□□□□□ -2.12
Usp39Q3TIX9 Gm24076-201ENSMUST00000158179 94 ntBASIC1.78□□□□□ -2.12
Usp39Q3TIX9 Gm23261-201ENSMUST00000158316 136 ntBASIC1.78□□□□□ -2.12
Usp39Q3TIX9 Gm26213-201ENSMUST00000158582 110 ntBASIC1.78□□□□□ -2.12
Usp39Q3TIX9 Gm25750-201ENSMUST00000175483 112 ntBASIC1.78□□□□□ -2.12
Usp39Q3TIX9 Gm27511-201ENSMUST00000183502 127 ntBASIC1.78□□□□□ -2.12
Usp39Q3TIX9 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Usp39Q3TIX9 Gm24984-201ENSMUST00000104454 133 ntBASIC1.77□□□□□ -2.13
Usp39Q3TIX9 Gm23788-201ENSMUST00000122535 106 ntBASIC1.77□□□□□ -2.13
Usp39Q3TIX9 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Usp39Q3TIX9 Gm25329-201ENSMUST00000158041 126 ntBASIC1.77□□□□□ -2.13
Usp39Q3TIX9 Gm22089-201ENSMUST00000158336 102 ntBASIC1.77□□□□□ -2.13
Usp39Q3TIX9 Gm25976-201ENSMUST00000158695 130 ntBASIC1.77□□□□□ -2.13
Usp39Q3TIX9 Gm5900-201ENSMUST00000179862 375 ntBASIC1.77□□□□□ -2.13
Usp39Q3TIX9 Mir6379-201ENSMUST00000183392 115 ntBASIC1.77□□□□□ -2.13
Usp39Q3TIX9 Gm25788-201ENSMUST00000082721 131 ntBASIC1.77□□□□□ -2.13
Usp39Q3TIX9 Snord80-201ENSMUST00000083801 81 ntBASIC1.77□□□□□ -2.13
Usp39Q3TIX9 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1.77□□□□□ -2.13
Usp39Q3TIX9 Gm25611-201ENSMUST00000104017 133 ntBASIC1.76□□□□□ -2.13
Usp39Q3TIX9 Gm14882-201ENSMUST00000117216 218 ntBASIC1.76□□□□□ -2.13
Usp39Q3TIX9 Gm26425-201ENSMUST00000122529 82 ntBASIC1.76□□□□□ -2.13
Usp39Q3TIX9 Gm24783-201ENSMUST00000157639 100 ntBASIC1.76□□□□□ -2.13
Usp39Q3TIX9 Gm22706-201ENSMUST00000157907 112 ntBASIC1.76□□□□□ -2.13
Usp39Q3TIX9 Gm23838-201ENSMUST00000158067 162 ntBASIC1.76□□□□□ -2.13
Usp39Q3TIX9 Gm23065-201ENSMUST00000158236 130 ntBASIC1.76□□□□□ -2.13
Usp39Q3TIX9 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.76□□□□□ -2.13
Usp39Q3TIX9 Mir6352-201ENSMUST00000184495 116 ntBASIC1.76□□□□□ -2.13
Usp39Q3TIX9 Gm45265-201ENSMUST00000210852 2497 ntBASIC1.75□□□□□ -2.13
Usp39Q3TIX9 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Usp39Q3TIX9 Gm22551-201ENSMUST00000157795 103 ntBASIC1.75□□□□□ -2.13
Usp39Q3TIX9 AC132833.2-201ENSMUST00000228699 157 ntBASIC1.75□□□□□ -2.13
Usp39Q3TIX9 Gm26109-201ENSMUST00000083970 70 ntBASIC1.75□□□□□ -2.13
Usp39Q3TIX9 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Usp39Q3TIX9 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.75□□□□□ -2.13
Usp39Q3TIX9 Gm25610-201ENSMUST00000104016 129 ntBASIC1.74□□□□□ -2.13
Usp39Q3TIX9 Gm24638-201ENSMUST00000179807 132 ntBASIC1.74□□□□□ -2.13
Usp39Q3TIX9 Mir8116-201ENSMUST00000184134 97 ntBASIC1.74□□□□□ -2.13
Usp39Q3TIX9 Mir3087-201ENSMUST00000199405 56 ntBASIC1.74□□□□□ -2.13
Usp39Q3TIX9 Gm45754-201ENSMUST00000212380 279 ntBASIC1.74□□□□□ -2.13
Usp39Q3TIX9 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.74□□□□□ -2.13
Usp39Q3TIX9 AC140930.2-201ENSMUST00000221803 109 ntBASIC1.74□□□□□ -2.13
Usp39Q3TIX9 Gm26123-201ENSMUST00000083363 135 ntBASIC1.74□□□□□ -2.13
Usp39Q3TIX9 Mir802-201ENSMUST00000103258 97 ntBASIC1.73□□□□□ -2.13
Usp39Q3TIX9 Gm22672-201ENSMUST00000104414 134 ntBASIC1.73□□□□□ -2.13
Usp39Q3TIX9 Gm22425-201ENSMUST00000158532 138 ntBASIC1.73□□□□□ -2.13
Usp39Q3TIX9 Mir7678-201ENSMUST00000185076 71 ntBASIC1.73□□□□□ -2.13
Usp39Q3TIX9 Gm42935-201ENSMUST00000202004 151 ntBASIC1.73□□□□□ -2.13
Usp39Q3TIX9 Gm22884-201ENSMUST00000083127 140 ntBASIC1.73□□□□□ -2.13
Usp39Q3TIX9 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.73□□□□□ -2.13
Usp39Q3TIX9 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.72□□□□□ -2.13
Usp39Q3TIX9 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Usp39Q3TIX9 Gm24366-201ENSMUST00000175383 86 ntBASIC1.72□□□□□ -2.13
Usp39Q3TIX9 Gm37778-201ENSMUST00000191732 190 ntBASIC1.72□□□□□ -2.13
Usp39Q3TIX9 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.72□□□□□ -2.13
Usp39Q3TIX9 Mir873a-201ENSMUST00000104863 77 ntBASIC1.71□□□□□ -2.14
Usp39Q3TIX9 Gm23375-201ENSMUST00000175407 83 ntBASIC1.71□□□□□ -2.14
Usp39Q3TIX9 Gm24801-201ENSMUST00000178503 105 ntBASIC1.71□□□□□ -2.14
Usp39Q3TIX9 Mir7021-201ENSMUST00000197026 63 ntBASIC1.71□□□□□ -2.14
Usp39Q3TIX9 Gm24165-201ENSMUST00000082718 128 ntBASIC1.71□□□□□ -2.14
Usp39Q3TIX9 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Usp39Q3TIX9 Mir466l-201ENSMUST00000104866 121 ntBASIC1.7□□□□□ -2.14
Usp39Q3TIX9 Gm25112-201ENSMUST00000122680 104 ntBASIC1.7□□□□□ -2.14
Usp39Q3TIX9 Gm23208-201ENSMUST00000158666 127 ntBASIC1.7□□□□□ -2.14
Usp39Q3TIX9 Gm24880-201ENSMUST00000158776 85 ntBASIC1.7□□□□□ -2.14
Usp39Q3TIX9 Gm22503-201ENSMUST00000158983 115 ntBASIC1.7□□□□□ -2.14
Usp39Q3TIX9 Gm16539-201ENSMUST00000160086 327 ntBASIC1.7□□□□□ -2.14
Usp39Q3TIX9 Gm25241-201ENSMUST00000174909 84 ntBASIC1.7□□□□□ -2.14
Usp39Q3TIX9 Gm26217-201ENSMUST00000175212 84 ntBASIC1.7□□□□□ -2.14
Usp39Q3TIX9 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.7□□□□□ -2.14
Usp39Q3TIX9 Mir5619-201ENSMUST00000176065 61 ntBASIC1.7□□□□□ -2.14
Usp39Q3TIX9 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.7□□□□□ -2.14
Usp39Q3TIX9 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Usp39Q3TIX9 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Usp39Q3TIX9 Gm11248-201ENSMUST00000119568 201 ntBASIC1.69□□□□□ -2.14
Usp39Q3TIX9 Gm25044-201ENSMUST00000158603 104 ntBASIC1.69□□□□□ -2.14
Usp39Q3TIX9 Gm27722-201ENSMUST00000183908 76 ntBASIC1.69□□□□□ -2.14
Usp39Q3TIX9 Mir6419-201ENSMUST00000184784 113 ntBASIC1.69□□□□□ -2.14
Usp39Q3TIX9 Gm44462-201ENSMUST00000199696 129 ntBASIC1.69□□□□□ -2.14
Usp39Q3TIX9 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.69□□□□□ -2.14
Usp39Q3TIX9 Mir107-201ENSMUST00000083660 87 ntBASIC1.69□□□□□ -2.14
Usp39Q3TIX9 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.69□□□□□ -2.14
Usp39Q3TIX9 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
Usp39Q3TIX9 Mir654-201ENSMUST00000104787 84 ntBASIC1.68□□□□□ -2.14
Usp39Q3TIX9 Gm22815-201ENSMUST00000157451 62 ntBASIC1.68□□□□□ -2.14
Usp39Q3TIX9 Gm25382-201ENSMUST00000157811 97 ntBASIC1.68□□□□□ -2.14
Usp39Q3TIX9 Gm26369-201ENSMUST00000157825 100 ntBASIC1.68□□□□□ -2.14
Usp39Q3TIX9 Gm25949-201ENSMUST00000175333 114 ntBASIC1.68□□□□□ -2.14
Usp39Q3TIX9 Gm23369-201ENSMUST00000175406 105 ntBASIC1.68□□□□□ -2.14
Usp39Q3TIX9 Gm25449-201ENSMUST00000179389 79 ntBASIC1.68□□□□□ -2.14
Usp39Q3TIX9 Mir6369-201ENSMUST00000183772 106 ntBASIC1.68□□□□□ -2.14
Usp39Q3TIX9 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC1.68□□□□□ -2.14
Usp39Q3TIX9 Gm24412-201ENSMUST00000083426 109 ntBASIC1.68□□□□□ -2.14
Usp39Q3TIX9 Mir221-201ENSMUST00000083488 95 ntBASIC1.68□□□□□ -2.14
Usp39Q3TIX9 Gm25337-201ENSMUST00000083723 104 ntBASIC1.68□□□□□ -2.14
Usp39Q3TIX9 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC1.67□□□□□ -2.14
Usp39Q3TIX9 Gm23267-201ENSMUST00000178490 132 ntBASIC1.67□□□□□ -2.14
Usp39Q3TIX9 Mir6237-201ENSMUST00000183808 91 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 139.6 ms