Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Col6a2Q02788 Gm23170-201ENSMUST00000157158 106 ntBASIC2.39□□□□□ -2.03
Col6a2Q02788 Gm24475-201ENSMUST00000157435 143 ntBASIC2.39□□□□□ -2.03
Col6a2Q02788 Gm22338-201ENSMUST00000157715 129 ntBASIC2.39□□□□□ -2.03
Col6a2Q02788 Gm24436-201ENSMUST00000157889 302 ntBASIC2.39□□□□□ -2.03
Col6a2Q02788 Gm24656-201ENSMUST00000177548 132 ntBASIC2.39□□□□□ -2.03
Col6a2Q02788 Gm44903-201ENSMUST00000206840 130 ntBASIC2.39□□□□□ -2.03
Col6a2Q02788 Mir301-201ENSMUST00000083655 86 ntBASIC2.39□□□□□ -2.03
Col6a2Q02788 Mir494-201ENSMUST00000093632 85 ntBASIC2.39□□□□□ -2.03
Col6a2Q02788 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Col6a2Q02788 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
Col6a2Q02788 Mir20b-201ENSMUST00000102087 80 ntBASIC2.38□□□□□ -2.03
Col6a2Q02788 Gm24049-201ENSMUST00000102409 100 ntBASIC2.38□□□□□ -2.03
Col6a2Q02788 Mir297-1-201ENSMUST00000103800 76 ntBASIC2.38□□□□□ -2.03
Col6a2Q02788 Gm23900-201ENSMUST00000157569 108 ntBASIC2.38□□□□□ -2.03
Col6a2Q02788 Gm22517-201ENSMUST00000158265 136 ntBASIC2.38□□□□□ -2.03
Col6a2Q02788 Gm23005-201ENSMUST00000158950 136 ntBASIC2.38□□□□□ -2.03
Col6a2Q02788 Gm25642-201ENSMUST00000175137 66 ntBASIC2.38□□□□□ -2.03
Col6a2Q02788 Gm27399-201ENSMUST00000184250 78 ntBASIC2.38□□□□□ -2.03
Col6a2Q02788 AC157602.1-201ENSMUST00000197446 105 ntBASIC2.38□□□□□ -2.03
Col6a2Q02788 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Col6a2Q02788 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Col6a2Q02788 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Col6a2Q02788 Gm25465-201ENSMUST00000157716 105 ntBASIC2.37□□□□□ -2.03
Col6a2Q02788 Gm22554-201ENSMUST00000157798 147 ntBASIC2.37□□□□□ -2.03
Col6a2Q02788 Gm26290-201ENSMUST00000158891 145 ntBASIC2.37□□□□□ -2.03
Col6a2Q02788 Gm22401-201ENSMUST00000174927 117 ntBASIC2.37□□□□□ -2.03
Col6a2Q02788 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Col6a2Q02788 Snord45b-201ENSMUST00000082797 71 ntBASIC2.37□□□□□ -2.03
Col6a2Q02788 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Col6a2Q02788 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Col6a2Q02788 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.36□□□□□ -2.03
Col6a2Q02788 Gm26342-201ENSMUST00000104557 129 ntBASIC2.36□□□□□ -2.03
Col6a2Q02788 Gm26341-201ENSMUST00000104561 134 ntBASIC2.36□□□□□ -2.03
Col6a2Q02788 Gm24725-201ENSMUST00000158229 125 ntBASIC2.36□□□□□ -2.03
Col6a2Q02788 Gm24210-201ENSMUST00000158263 133 ntBASIC2.36□□□□□ -2.03
Col6a2Q02788 Gm22159-201ENSMUST00000158412 130 ntBASIC2.36□□□□□ -2.03
Col6a2Q02788 Snora24-201ENSMUST00000174989 130 ntBASIC2.36□□□□□ -2.03
Col6a2Q02788 Gm44462-201ENSMUST00000199696 129 ntBASIC2.36□□□□□ -2.03
Col6a2Q02788 Mir497-201ENSMUST00000200557 84 ntBASIC2.36□□□□□ -2.03
Col6a2Q02788 Gm25652-201ENSMUST00000083780 103 ntBASIC2.36□□□□□ -2.03
Col6a2Q02788 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Col6a2Q02788 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.36□□□□□ -2.03
Col6a2Q02788 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
Col6a2Q02788 Gm25619-201ENSMUST00000122621 104 ntBASIC2.35□□□□□ -2.03
Col6a2Q02788 Gm26133-201ENSMUST00000157363 100 ntBASIC2.35□□□□□ -2.03
Col6a2Q02788 Gm25996-201ENSMUST00000175393 117 ntBASIC2.35□□□□□ -2.03
Col6a2Q02788 Mir5118-201ENSMUST00000175551 67 ntBASIC2.35□□□□□ -2.03
Col6a2Q02788 Mir30f-201ENSMUST00000196073 92 ntBASIC2.35□□□□□ -2.03
Col6a2Q02788 Mir7118-201ENSMUST00000197760 61 ntBASIC2.35□□□□□ -2.03
Col6a2Q02788 Mir6925-201ENSMUST00000197857 70 ntBASIC2.35□□□□□ -2.03
Col6a2Q02788 Mir3961-201ENSMUST00000198795 59 ntBASIC2.35□□□□□ -2.03
Col6a2Q02788 Gm45197-201ENSMUST00000205288 151 ntBASIC2.35□□□□□ -2.03
Col6a2Q02788 Gm45522-201ENSMUST00000210784 166 ntBASIC2.35□□□□□ -2.03
Col6a2Q02788 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Col6a2Q02788 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Col6a2Q02788 Gm23950-201ENSMUST00000104026 129 ntBASIC2.34□□□□□ -2.03
Col6a2Q02788 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.34□□□□□ -2.03
Col6a2Q02788 Gm26004-201ENSMUST00000158804 116 ntBASIC2.34□□□□□ -2.03
Col6a2Q02788 Gm16561-201ENSMUST00000163001 192 ntBASIC2.34□□□□□ -2.03
Col6a2Q02788 Gm23375-201ENSMUST00000175407 83 ntBASIC2.34□□□□□ -2.03
Col6a2Q02788 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Col6a2Q02788 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.33□□□□□ -2.04
Col6a2Q02788 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Col6a2Q02788 Gm11857-201ENSMUST00000119817 324 ntBASIC2.33□□□□□ -2.04
Col6a2Q02788 Gm24406-201ENSMUST00000083026 128 ntBASIC2.33□□□□□ -2.04
Col6a2Q02788 Gm24698-201ENSMUST00000083883 130 ntBASIC2.33□□□□□ -2.04
Col6a2Q02788 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
Col6a2Q02788 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.32□□□□□ -2.04
Col6a2Q02788 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.32□□□□□ -2.04
Col6a2Q02788 Gm24907-201ENSMUST00000116932 128 ntBASIC2.32□□□□□ -2.04
Col6a2Q02788 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.32□□□□□ -2.04
Col6a2Q02788 Gm23854-201ENSMUST00000158378 108 ntBASIC2.32□□□□□ -2.04
Col6a2Q02788 Gm25011-201ENSMUST00000158398 126 ntBASIC2.32□□□□□ -2.04
Col6a2Q02788 Gm26359-201ENSMUST00000158873 101 ntBASIC2.32□□□□□ -2.04
Col6a2Q02788 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.32□□□□□ -2.04
Col6a2Q02788 Gm44477-201ENSMUST00000199661 110 ntBASIC2.32□□□□□ -2.04
Col6a2Q02788 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.32□□□□□ -2.04
Col6a2Q02788 Gm25357-201ENSMUST00000082745 72 ntBASIC2.32□□□□□ -2.04
Col6a2Q02788 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Col6a2Q02788 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Col6a2Q02788 Snora36b-201ENSMUST00000104383 132 ntBASIC2.31□□□□□ -2.04
Col6a2Q02788 Gm24588-201ENSMUST00000116696 83 ntBASIC2.31□□□□□ -2.04
Col6a2Q02788 Gm23551-201ENSMUST00000116852 121 ntBASIC2.31□□□□□ -2.04
Col6a2Q02788 Gm23033-201ENSMUST00000157996 134 ntBASIC2.31□□□□□ -2.04
Col6a2Q02788 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC2.31□□□□□ -2.04
Col6a2Q02788 AC154506.4-201ENSMUST00000224898 3416 ntBASIC2.31□□□□□ -2.04
Col6a2Q02788 Gm43885-201ENSMUST00000204928 2542 ntBASIC2.31□□□□□ -2.04
Col6a2Q02788 Gm22768-201ENSMUST00000158366 153 ntBASIC2.3□□□□□ -2.04
Col6a2Q02788 Gm24223-201ENSMUST00000158827 90 ntBASIC2.3□□□□□ -2.04
Col6a2Q02788 Mir6369-201ENSMUST00000183772 106 ntBASIC2.3□□□□□ -2.04
Col6a2Q02788 Gm20118-201ENSMUST00000187207 162 ntBASIC2.3□□□□□ -2.04
Col6a2Q02788 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.3□□□□□ -2.04
Col6a2Q02788 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC2.3□□□□□ -2.04
Col6a2Q02788 Mir429-201ENSMUST00000083493 83 ntBASIC2.3□□□□□ -2.04
Col6a2Q02788 Mir29a-201ENSMUST00000083676 88 ntBASIC2.3□□□□□ -2.04
Col6a2Q02788 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
Col6a2Q02788 Gm23980-201ENSMUST00000157135 158 ntBASIC2.29□□□□□ -2.04
Col6a2Q02788 Gm24547-201ENSMUST00000158649 149 ntBASIC2.29□□□□□ -2.04
Col6a2Q02788 Mir378a-201ENSMUST00000198300 66 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 163.8 ms