Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.85□□□□□ -2.11
Col8a1Q00780 Gm6109-201ENSMUST00000223297 348 ntBASIC1.85□□□□□ -2.11
Col8a1Q00780 Gm25696-201ENSMUST00000082900 105 ntBASIC1.85□□□□□ -2.11
Col8a1Q00780 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.85□□□□□ -2.11
Col8a1Q00780 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.84□□□□□ -2.11
Col8a1Q00780 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.84□□□□□ -2.11
Col8a1Q00780 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Col8a1Q00780 Gm26213-201ENSMUST00000158582 110 ntBASIC1.84□□□□□ -2.11
Col8a1Q00780 Gm25950-201ENSMUST00000175331 100 ntBASIC1.84□□□□□ -2.11
Col8a1Q00780 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.84□□□□□ -2.11
Col8a1Q00780 mt-Tn-201ENSMUST00000082399 71 ntBASIC1.84□□□□□ -2.11
Col8a1Q00780 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Col8a1Q00780 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Col8a1Q00780 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Col8a1Q00780 Mir301b-201ENSMUST00000102333 97 ntBASIC1.83□□□□□ -2.12
Col8a1Q00780 Gm23656-201ENSMUST00000122626 112 ntBASIC1.83□□□□□ -2.12
Col8a1Q00780 Gm23375-201ENSMUST00000175407 83 ntBASIC1.83□□□□□ -2.12
Col8a1Q00780 Gm27987-201ENSMUST00000184023 93 ntBASIC1.83□□□□□ -2.12
Col8a1Q00780 Gm44462-201ENSMUST00000199696 129 ntBASIC1.83□□□□□ -2.12
Col8a1Q00780 Gm23299-201ENSMUST00000082708 79 ntBASIC1.83□□□□□ -2.12
Col8a1Q00780 Gm25644-201ENSMUST00000083209 107 ntBASIC1.83□□□□□ -2.12
Col8a1Q00780 Gm22151-201ENSMUST00000116963 58 ntBASIC1.82□□□□□ -2.12
Col8a1Q00780 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.82□□□□□ -2.12
Col8a1Q00780 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.82□□□□□ -2.12
Col8a1Q00780 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Col8a1Q00780 Gm15654-201ENSMUST00000152660 300 ntBASIC1.82□□□□□ -2.12
Col8a1Q00780 Gm25460-201ENSMUST00000157954 127 ntBASIC1.82□□□□□ -2.12
Col8a1Q00780 Gm24076-201ENSMUST00000158179 94 ntBASIC1.82□□□□□ -2.12
Col8a1Q00780 Gm16307-201ENSMUST00000161269 210 ntBASIC1.82□□□□□ -2.12
Col8a1Q00780 Gm23967-201ENSMUST00000175062 78 ntBASIC1.82□□□□□ -2.12
Col8a1Q00780 Gm25750-201ENSMUST00000175483 112 ntBASIC1.82□□□□□ -2.12
Col8a1Q00780 Snora26-201ENSMUST00000175614 121 ntBASIC1.82□□□□□ -2.12
Col8a1Q00780 Mir7217-201ENSMUST00000200304 62 ntBASIC1.82□□□□□ -2.12
Col8a1Q00780 AC132384.11-201ENSMUST00000219676 178 ntBASIC1.82□□□□□ -2.12
Col8a1Q00780 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Col8a1Q00780 Gm22554-201ENSMUST00000157798 147 ntBASIC1.81□□□□□ -2.12
Col8a1Q00780 Gm25011-201ENSMUST00000158398 126 ntBASIC1.81□□□□□ -2.12
Col8a1Q00780 Gm20391-201ENSMUST00000174722 106 ntBASIC1.81□□□□□ -2.12
Col8a1Q00780 Gm25996-201ENSMUST00000175393 117 ntBASIC1.81□□□□□ -2.12
Col8a1Q00780 Gm27975-201ENSMUST00000184400 101 ntBASIC1.81□□□□□ -2.12
Col8a1Q00780 Gm27686-201ENSMUST00000185123 91 ntBASIC1.81□□□□□ -2.12
Col8a1Q00780 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Col8a1Q00780 Gm24313-201ENSMUST00000082561 133 ntBASIC1.81□□□□□ -2.12
Col8a1Q00780 Gm22458-201ENSMUST00000082576 107 ntBASIC1.81□□□□□ -2.12
Col8a1Q00780 Gm26922-201ENSMUST00000082687 72 ntBASIC1.81□□□□□ -2.12
Col8a1Q00780 Gm24044-201ENSMUST00000083107 156 ntBASIC1.81□□□□□ -2.12
Col8a1Q00780 Gm23344-201ENSMUST00000083818 68 ntBASIC1.81□□□□□ -2.12
Col8a1Q00780 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
Col8a1Q00780 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.8□□□□□ -2.12
Col8a1Q00780 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col8a1Q00780 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
Col8a1Q00780 Gm24049-201ENSMUST00000102409 100 ntBASIC1.8□□□□□ -2.12
Col8a1Q00780 Mir764-201ENSMUST00000103259 108 ntBASIC1.8□□□□□ -2.12
Col8a1Q00780 Gm25832-201ENSMUST00000104140 130 ntBASIC1.8□□□□□ -2.12
Col8a1Q00780 Gm26280-201ENSMUST00000157096 101 ntBASIC1.8□□□□□ -2.12
Col8a1Q00780 Gm22083-201ENSMUST00000157586 102 ntBASIC1.8□□□□□ -2.12
Col8a1Q00780 Gm22522-201ENSMUST00000158271 151 ntBASIC1.8□□□□□ -2.12
Col8a1Q00780 Gm23761-201ENSMUST00000158347 104 ntBASIC1.8□□□□□ -2.12
Col8a1Q00780 Gm24769-201ENSMUST00000158506 129 ntBASIC1.8□□□□□ -2.12
Col8a1Q00780 Gm22140-201ENSMUST00000158745 120 ntBASIC1.8□□□□□ -2.12
Col8a1Q00780 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col8a1Q00780 Gm37557-201ENSMUST00000191640 139 ntBASIC1.8□□□□□ -2.12
Col8a1Q00780 Gm25796-201ENSMUST00000082645 163 ntBASIC1.8□□□□□ -2.12
Col8a1Q00780 Gm6185-201ENSMUST00000193379 3553 ntBASIC1.79□□□□□ -2.12
Col8a1Q00780 Gm25044-201ENSMUST00000158603 104 ntBASIC1.79□□□□□ -2.12
Col8a1Q00780 Gm20477-201ENSMUST00000174028 280 ntBASIC1.79□□□□□ -2.12
Col8a1Q00780 Gm26398-201ENSMUST00000179015 127 ntBASIC1.79□□□□□ -2.12
Col8a1Q00780 Gm25618-201ENSMUST00000179484 107 ntBASIC1.79□□□□□ -2.12
Col8a1Q00780 Snora3-201ENSMUST00000083082 132 ntBASIC1.79□□□□□ -2.12
Col8a1Q00780 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
Col8a1Q00780 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.78□□□□□ -2.12
Col8a1Q00780 Gm22205-201ENSMUST00000122655 71 ntBASIC1.78□□□□□ -2.12
Col8a1Q00780 Gm23826-201ENSMUST00000157394 119 ntBASIC1.78□□□□□ -2.12
Col8a1Q00780 Gm16561-201ENSMUST00000163001 192 ntBASIC1.78□□□□□ -2.12
Col8a1Q00780 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.78□□□□□ -2.12
Col8a1Q00780 Mir6352-201ENSMUST00000184495 116 ntBASIC1.78□□□□□ -2.12
Col8a1Q00780 Gm22884-201ENSMUST00000083127 140 ntBASIC1.78□□□□□ -2.12
Col8a1Q00780 Mir20b-201ENSMUST00000102087 80 ntBASIC1.77□□□□□ -2.13
Col8a1Q00780 Gm24900-201ENSMUST00000158128 134 ntBASIC1.77□□□□□ -2.13
Col8a1Q00780 Gm16539-201ENSMUST00000160086 327 ntBASIC1.77□□□□□ -2.13
Col8a1Q00780 Gm25949-201ENSMUST00000175333 114 ntBASIC1.77□□□□□ -2.13
Col8a1Q00780 Gm25740-201ENSMUST00000180247 107 ntBASIC1.77□□□□□ -2.13
Col8a1Q00780 Gm27443-201ENSMUST00000184660 98 ntBASIC1.77□□□□□ -2.13
Col8a1Q00780 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Col8a1Q00780 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Col8a1Q00780 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Col8a1Q00780 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Col8a1Q00780 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Col8a1Q00780 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Col8a1Q00780 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Col8a1Q00780 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Col8a1Q00780 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Col8a1Q00780 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.77□□□□□ -2.13
Col8a1Q00780 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Col8a1Q00780 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Col8a1Q00780 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
Col8a1Q00780 Gm25542-201ENSMUST00000116889 94 ntBASIC1.76□□□□□ -2.13
Col8a1Q00780 Gm16510-201ENSMUST00000153501 249 ntBASIC1.76□□□□□ -2.13
Col8a1Q00780 Gm24237-201ENSMUST00000157790 132 ntBASIC1.76□□□□□ -2.13
Col8a1Q00780 Mir8119-201ENSMUST00000183371 129 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms