Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Gm44828-201ENSMUST00000203745 106 ntBASIC0.44□□□□□ -2.34
IhhP97812 Gm8508-201ENSMUST00000061226 363 ntBASIC0.44□□□□□ -2.34
IhhP97812 Gm25138-201ENSMUST00000083248 136 ntBASIC0.44□□□□□ -2.34
IhhP97812 Gm14946-201ENSMUST00000119859 296 ntBASIC0.43□□□□□ -2.34
IhhP97812 Gm6272-201ENSMUST00000121256 171 ntBASIC0.43□□□□□ -2.34
IhhP97812 Gm25985-201ENSMUST00000122677 107 ntBASIC0.43□□□□□ -2.34
IhhP97812 Gm22476-201ENSMUST00000158902 100 ntBASIC0.43□□□□□ -2.34
IhhP97812 Gm27289-201ENSMUST00000183341 82 ntBASIC0.43□□□□□ -2.34
IhhP97812 Mir6369-201ENSMUST00000183772 106 ntBASIC0.43□□□□□ -2.34
IhhP97812 Gm27285-201ENSMUST00000183875 127 ntBASIC0.43□□□□□ -2.34
IhhP97812 Mir7077-201ENSMUST00000183991 57 ntBASIC0.43□□□□□ -2.34
IhhP97812 Gm42623-201ENSMUST00000197225 379 ntBASIC0.43□□□□□ -2.34
IhhP97812 Mir201-201ENSMUST00000083470 66 ntBASIC0.43□□□□□ -2.34
IhhP97812 Gm24030-201ENSMUST00000083931 164 ntBASIC0.43□□□□□ -2.34
IhhP97812 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.42□□□□□ -2.34
IhhP97812 Gm22079-201ENSMUST00000157592 106 ntBASIC0.42□□□□□ -2.34
IhhP97812 Gm25769-201ENSMUST00000158569 127 ntBASIC0.42□□□□□ -2.34
IhhP97812 Gm24547-201ENSMUST00000158649 149 ntBASIC0.42□□□□□ -2.34
IhhP97812 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.42□□□□□ -2.34
IhhP97812 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
IhhP97812 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.42□□□□□ -2.34
IhhP97812 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.42□□□□□ -2.34
IhhP97812 Gm24208-201ENSMUST00000082783 135 ntBASIC0.42□□□□□ -2.34
IhhP97812 Gm23969-201ENSMUST00000083324 74 ntBASIC0.42□□□□□ -2.34
IhhP97812 Mir302d-201ENSMUST00000083513 66 ntBASIC0.42□□□□□ -2.34
IhhP97812 Mir141-201ENSMUST00000083540 72 ntBASIC0.42□□□□□ -2.34
IhhP97812 Mir411-201ENSMUST00000083543 82 ntBASIC0.42□□□□□ -2.34
IhhP97812 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.42□□□□□ -2.34
IhhP97812 Snord69-201ENSMUST00000104024 80 ntBASIC0.41□□□□□ -2.34
IhhP97812 Gm22048-201ENSMUST00000104721 89 ntBASIC0.41□□□□□ -2.34
IhhP97812 Gm23209-201ENSMUST00000158667 110 ntBASIC0.41□□□□□ -2.34
IhhP97812 Snord80-202ENSMUST00000199023 77 ntBASIC0.41□□□□□ -2.34
IhhP97812 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.41□□□□□ -2.34
IhhP97812 Gm24527-201ENSMUST00000082920 107 ntBASIC0.41□□□□□ -2.34
IhhP97812 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.41□□□□□ -2.34
IhhP97812 Mir488-201ENSMUST00000093595 109 ntBASIC0.41□□□□□ -2.34
IhhP97812 Gm22759-201ENSMUST00000102276 96 ntBASIC0.4□□□□□ -2.35
IhhP97812 Gm22148-201ENSMUST00000104445 107 ntBASIC0.4□□□□□ -2.35
IhhP97812 Gm23080-201ENSMUST00000157846 103 ntBASIC0.4□□□□□ -2.35
IhhP97812 Gm24728-201ENSMUST00000158226 125 ntBASIC0.4□□□□□ -2.35
IhhP97812 Gm23853-201ENSMUST00000158375 104 ntBASIC0.4□□□□□ -2.35
IhhP97812 Gm23852-201ENSMUST00000158376 77 ntBASIC0.4□□□□□ -2.35
IhhP97812 Gm17020-201ENSMUST00000172274 274 ntBASIC0.4□□□□□ -2.35
IhhP97812 Mir6390-201ENSMUST00000184405 129 ntBASIC0.4□□□□□ -2.35
IhhP97812 Gm37624-201ENSMUST00000193751 219 ntBASIC0.4□□□□□ -2.35
IhhP97812 Gm44211-201ENSMUST00000204867 145 ntBASIC0.4□□□□□ -2.35
IhhP97812 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.4□□□□□ -2.35
IhhP97812 Gm23461-201ENSMUST00000083265 107 ntBASIC0.4□□□□□ -2.35
IhhP97812 Mir489-201ENSMUST00000093599 107 ntBASIC0.4□□□□□ -2.35
IhhP97812 Scarna9-201ENSMUST00000104318 70 ntBASIC0.39□□□□□ -2.35
IhhP97812 Gm14039-201ENSMUST00000118705 101 ntBASIC0.39□□□□□ -2.35
IhhP97812 Gm14884-201ENSMUST00000120456 196 ntBASIC0.39□□□□□ -2.35
IhhP97812 Gm24963-201ENSMUST00000157916 144 ntBASIC0.39□□□□□ -2.35
IhhP97812 Gm26403-201ENSMUST00000158500 105 ntBASIC0.39□□□□□ -2.35
IhhP97812 Gm26468-201ENSMUST00000158644 106 ntBASIC0.39□□□□□ -2.35
IhhP97812 Gm26116-201ENSMUST00000175600 77 ntBASIC0.39□□□□□ -2.35
IhhP97812 Gm37116-201ENSMUST00000195161 147 ntBASIC0.39□□□□□ -2.35
IhhP97812 Gm26207-201ENSMUST00000082909 104 ntBASIC0.39□□□□□ -2.35
IhhP97812 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.38□□□□□ -2.35
IhhP97812 Gm22999-201ENSMUST00000157082 88 ntBASIC0.38□□□□□ -2.35
IhhP97812 Gm25444-201ENSMUST00000158999 113 ntBASIC0.38□□□□□ -2.35
IhhP97812 Gm24575-201ENSMUST00000175502 77 ntBASIC0.38□□□□□ -2.35
IhhP97812 Gm23416-201ENSMUST00000175520 95 ntBASIC0.38□□□□□ -2.35
IhhP97812 Gm22621-201ENSMUST00000179678 74 ntBASIC0.38□□□□□ -2.35
IhhP97812 Gm27465-201ENSMUST00000184290 91 ntBASIC0.38□□□□□ -2.35
IhhP97812 Gm43944-201ENSMUST00000205220 120 ntBASIC0.38□□□□□ -2.35
IhhP97812 Gm44922-201ENSMUST00000206690 90 ntBASIC0.38□□□□□ -2.35
IhhP97812 Gm24457-201ENSMUST00000083196 105 ntBASIC0.38□□□□□ -2.35
IhhP97812 Mir1899-201ENSMUST00000122798 96 ntBASIC0.37□□□□□ -2.35
IhhP97812 Gm25364-201ENSMUST00000158851 107 ntBASIC0.37□□□□□ -2.35
IhhP97812 Gm5002-201ENSMUST00000207145 223 ntBASIC0.37□□□□□ -2.35
IhhP97812 Mir224-201ENSMUST00000083608 82 ntBASIC0.37□□□□□ -2.35
IhhP97812 Gm22753-201ENSMUST00000083657 107 ntBASIC0.37□□□□□ -2.35
IhhP97812 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
IhhP97812 Mir466h-201ENSMUST00000104748 81 ntBASIC0.36□□□□□ -2.35
IhhP97812 Mir1298-201ENSMUST00000116681 98 ntBASIC0.36□□□□□ -2.35
IhhP97812 Gm15289-201ENSMUST00000117793 244 ntBASIC0.36□□□□□ -2.35
IhhP97812 Gm14502-201ENSMUST00000118154 113 ntBASIC0.36□□□□□ -2.35
IhhP97812 Gm23859-201ENSMUST00000158383 64 ntBASIC0.36□□□□□ -2.35
IhhP97812 Gm24549-201ENSMUST00000158647 139 ntBASIC0.36□□□□□ -2.35
IhhP97812 Gm22348-201ENSMUST00000178674 79 ntBASIC0.36□□□□□ -2.35
IhhP97812 Gm27792-201ENSMUST00000184031 115 ntBASIC0.36□□□□□ -2.35
IhhP97812 Mir471-201ENSMUST00000093596 67 ntBASIC0.36□□□□□ -2.35
IhhP97812 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.36□□□□□ -2.35
IhhP97812 Gm25565-201ENSMUST00000104605 105 ntBASIC0.35□□□□□ -2.35
IhhP97812 Gm27934-201ENSMUST00000158795 63 ntBASIC0.35□□□□□ -2.35
IhhP97812 Gm22466-201ENSMUST00000175278 69 ntBASIC0.35□□□□□ -2.35
IhhP97812 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.35□□□□□ -2.35
IhhP97812 Mir30a-201ENSMUST00000083471 71 ntBASIC0.35□□□□□ -2.35
IhhP97812 Gm10172-201ENSMUST00000085929 558 ntBASIC0.35□□□□□ -2.35
IhhP97812 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
IhhP97812 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
IhhP97812 Gm24381-201ENSMUST00000122697 104 ntBASIC0.34□□□□□ -2.36
IhhP97812 Gm15654-201ENSMUST00000152660 300 ntBASIC0.34□□□□□ -2.36
IhhP97812 Gm23036-201ENSMUST00000157885 99 ntBASIC0.34□□□□□ -2.36
IhhP97812 Gm28767-201ENSMUST00000188601 114 ntBASIC0.34□□□□□ -2.36
IhhP97812 Gm44807-201ENSMUST00000206115 154 ntBASIC0.34□□□□□ -2.36
IhhP97812 Gm44853-201ENSMUST00000209070 250 ntBASIC0.34□□□□□ -2.36
IhhP97812 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
IhhP97812 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 142.8 ms