Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm44489-201ENSMUST00000104619 97 ntBASIC1,13□□□□□ -2,23
Ercc3P49135 Gm24747-201ENSMUST00000157835 87 ntBASIC1,13□□□□□ -2,23
Ercc3P49135 Gm42795-201ENSMUST00000198847 76 ntBASIC1,13□□□□□ -2,23
Ercc3P49135 Gm20734-201ENSMUST00000216939 193 ntBASIC1,13□□□□□ -2,23
Ercc3P49135 Gm25797-201ENSMUST00000082640 107 ntBASIC1,13□□□□□ -2,23
Ercc3P49135 Mir27b-201ENSMUST00000083541 73 ntBASIC1,13□□□□□ -2,23
Ercc3P49135 Gm22336-201ENSMUST00000157719 107 ntBASIC1,12□□□□□ -2,23
Ercc3P49135 Gm23763-201ENSMUST00000158345 60 ntBASIC1,12□□□□□ -2,23
Ercc3P49135 Gm42533-201ENSMUST00000196247 157 ntBASIC1,12□□□□□ -2,23
Ercc3P49135 AC124739.2-201ENSMUST00000222201 109 ntBASIC1,12□□□□□ -2,23
Ercc3P49135 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1,11□□□□□ -2,23
Ercc3P49135 Gm24431-201ENSMUST00000104073 66 ntBASIC1,11□□□□□ -2,23
Ercc3P49135 Gm25496-201ENSMUST00000104430 120 ntBASIC1,11□□□□□ -2,23
Ercc3P49135 Gm24509-201ENSMUST00000157086 101 ntBASIC1,11□□□□□ -2,23
Ercc3P49135 Gm25358-201ENSMUST00000157189 101 ntBASIC1,11□□□□□ -2,23
Ercc3P49135 Gm22815-201ENSMUST00000157451 62 ntBASIC1,11□□□□□ -2,23
Ercc3P49135 Gm24001-201ENSMUST00000158463 85 ntBASIC1,11□□□□□ -2,23
Ercc3P49135 Gm27446-201ENSMUST00000183963 89 ntBASIC1,11□□□□□ -2,23
Ercc3P49135 Mir709-201ENSMUST00000102190 88 ntBASIC1,1□□□□□ -2,23
Ercc3P49135 Mir3079-201ENSMUST00000175428 90 ntBASIC1,1□□□□□ -2,23
Ercc3P49135 DQ267101-201ENSMUST00000082562 73 ntBASIC1,1□□□□□ -2,23
Ercc3P49135 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1,09□□□□□ -2,23
Ercc3P49135 Gm25060-201ENSMUST00000157374 130 ntBASIC1,09□□□□□ -2,23
Ercc3P49135 Gm24238-201ENSMUST00000157792 98 ntBASIC1,09□□□□□ -2,23
Ercc3P49135 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC1,09□□□□□ -2,23
Ercc3P49135 Gm20409-201ENSMUST00000173457 130 ntBASIC1,09□□□□□ -2,23
Ercc3P49135 Mir10b-201ENSMUST00000083566 68 ntBASIC1,09□□□□□ -2,23
Ercc3P49135 Mir532-201ENSMUST00000093630 96 ntBASIC1,09□□□□□ -2,23
Ercc3P49135 Gm14946-201ENSMUST00000119859 296 ntBASIC1,08□□□□□ -2,24
Ercc3P49135 Gm23504-201ENSMUST00000158988 95 ntBASIC1,08□□□□□ -2,24
Ercc3P49135 Gm27587-201ENSMUST00000185116 163 ntBASIC1,08□□□□□ -2,24
Ercc3P49135 Gm37824-201ENSMUST00000193430 3236 ntBASIC1,08□□□□□ -2,24
Ercc3P49135 Gm22544-201ENSMUST00000104349 127 ntBASIC1,07□□□□□ -2,24
Ercc3P49135 Gm23838-201ENSMUST00000158067 162 ntBASIC1,07□□□□□ -2,24
Ercc3P49135 Mir3094-201ENSMUST00000175121 64 ntBASIC1,07□□□□□ -2,24
Ercc3P49135 Gm22801-201ENSMUST00000175624 84 ntBASIC1,07□□□□□ -2,24
Ercc3P49135 Gm22887-201ENSMUST00000178586 107 ntBASIC1,07□□□□□ -2,24
Ercc3P49135 Gm22286-201ENSMUST00000179708 107 ntBASIC1,07□□□□□ -2,24
Ercc3P49135 Mir6380-201ENSMUST00000184334 81 ntBASIC1,07□□□□□ -2,24
Ercc3P49135 Gm23722-201ENSMUST00000083002 130 ntBASIC1,07□□□□□ -2,24
Ercc3P49135 Gm23509-201ENSMUST00000083080 160 ntBASIC1,07□□□□□ -2,24
Ercc3P49135 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1,07□□□□□ -2,24
Ercc3P49135 Gm26011-201ENSMUST00000104410 104 ntBASIC1,06□□□□□ -2,24
Ercc3P49135 Snord32a-201ENSMUST00000083285 83 ntBASIC1,06□□□□□ -2,24
Ercc3P49135 Gm23991-201ENSMUST00000117033 93 ntBASIC1,05□□□□□ -2,24
Ercc3P49135 n-R5s70-201ENSMUST00000122650 116 ntBASIC1,05□□□□□ -2,24
Ercc3P49135 Gm24141-201ENSMUST00000122776 115 ntBASIC1,05□□□□□ -2,24
Ercc3P49135 Gm22842-201ENSMUST00000157709 118 ntBASIC1,05□□□□□ -2,24
Ercc3P49135 Gm25166-201ENSMUST00000158909 111 ntBASIC1,05□□□□□ -2,24
Ercc3P49135 Mir15a-201ENSMUST00000175266 84 ntBASIC1,05□□□□□ -2,24
Ercc3P49135 Gm44470-201ENSMUST00000203913 142 ntBASIC1,05□□□□□ -2,24
Ercc3P49135 Gm44807-201ENSMUST00000206115 154 ntBASIC1,05□□□□□ -2,24
Ercc3P49135 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1,05□□□□□ -2,24
Ercc3P49135 Gm24616-201ENSMUST00000083274 139 ntBASIC1,05□□□□□ -2,24
Ercc3P49135 Gm26358-201ENSMUST00000158215 97 ntBASIC1,04□□□□□ -2,24
Ercc3P49135 Gm25071-201ENSMUST00000175232 70 ntBASIC1,04□□□□□ -2,24
Ercc3P49135 Mir6364-201ENSMUST00000183396 86 ntBASIC1,04□□□□□ -2,24
Ercc3P49135 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC1,04□□□□□ -2,24
Ercc3P49135 Gm44301-201ENSMUST00000200362 143 ntBASIC1,04□□□□□ -2,24
Ercc3P49135 Gm23578-201ENSMUST00000103943 104 ntBASIC1,03□□□□□ -2,24
Ercc3P49135 Gm11248-201ENSMUST00000119568 201 ntBASIC1,03□□□□□ -2,24
Ercc3P49135 Gm23253-201ENSMUST00000157441 104 ntBASIC1,03□□□□□ -2,24
Ercc3P49135 Gm22349-201ENSMUST00000157864 107 ntBASIC1,03□□□□□ -2,24
Ercc3P49135 Mir695-201ENSMUST00000102261 109 ntBASIC1,02□□□□□ -2,25
Ercc3P49135 Gm25610-201ENSMUST00000104016 129 ntBASIC1,02□□□□□ -2,25
Ercc3P49135 Gm24717-201ENSMUST00000157522 124 ntBASIC1,02□□□□□ -2,25
Ercc3P49135 Gm16550-201ENSMUST00000162550 126 ntBASIC1,02□□□□□ -2,25
Ercc3P49135 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC1,02□□□□□ -2,25
Ercc3P49135 Mir6369-201ENSMUST00000183772 106 ntBASIC1,02□□□□□ -2,25
Ercc3P49135 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1,02□□□□□ -2,25
Ercc3P49135 Gm26091-201ENSMUST00000122704 82 ntBASIC1,01□□□□□ -2,25
Ercc3P49135 Gm25968-201ENSMUST00000157167 100 ntBASIC1,01□□□□□ -2,25
Ercc3P49135 Gm44859-201ENSMUST00000207831 94 ntBASIC1,01□□□□□ -2,25
Ercc3P49135 Gm45492-201ENSMUST00000211611 288 ntBASIC1,01□□□□□ -2,25
Ercc3P49135 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2,25
Ercc3P49135 Mir466b-3-201ENSMUST00000103806 81 ntBASIC1□□□□□ -2,25
Ercc3P49135 Gm25110-201ENSMUST00000116684 121 ntBASIC1□□□□□ -2,25
Ercc3P49135 Gm25775-201ENSMUST00000116716 121 ntBASIC1□□□□□ -2,25
Ercc3P49135 Gm24795-201ENSMUST00000116737 121 ntBASIC1□□□□□ -2,25
Ercc3P49135 Gm25171-201ENSMUST00000116926 121 ntBASIC1□□□□□ -2,25
Ercc3P49135 Gm14039-201ENSMUST00000118705 101 ntBASIC1□□□□□ -2,25
Ercc3P49135 Gm15654-201ENSMUST00000152660 300 ntBASIC1□□□□□ -2,25
Ercc3P49135 Gm25901-201ENSMUST00000158494 130 ntBASIC1□□□□□ -2,25
Ercc3P49135 Gm26337-201ENSMUST00000178000 79 ntBASIC1□□□□□ -2,25
Ercc3P49135 Gm38323-201ENSMUST00000192450 210 ntBASIC1□□□□□ -2,25
Ercc3P49135 Gm26338-201ENSMUST00000102372 110 ntBASIC0,99□□□□□ -2,25
Ercc3P49135 Gm22966-201ENSMUST00000157957 129 ntBASIC0,99□□□□□ -2,25
Ercc3P49135 Gm24547-201ENSMUST00000158649 149 ntBASIC0,99□□□□□ -2,25
Ercc3P49135 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0,99□□□□□ -2,25
Ercc3P49135 Mir669j-201ENSMUST00000179023 121 ntBASIC0,99□□□□□ -2,25
Ercc3P49135 Mir7657-201ENSMUST00000196051 57 ntBASIC0,99□□□□□ -2,25
Ercc3P49135 Gm23239-201ENSMUST00000083006 181 ntBASIC0,99□□□□□ -2,25
Ercc3P49135 Gm26084-201ENSMUST00000157903 104 ntBASIC0,98□□□□□ -2,25
Ercc3P49135 Gm24728-201ENSMUST00000158226 125 ntBASIC0,98□□□□□ -2,25
Ercc3P49135 Gm26291-201ENSMUST00000158889 137 ntBASIC0,98□□□□□ -2,25
Ercc3P49135 Gm22775-201ENSMUST00000177630 120 ntBASIC0,98□□□□□ -2,25
Ercc3P49135 Gm23569-201ENSMUST00000180120 120 ntBASIC0,98□□□□□ -2,25
Ercc3P49135 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0,98□□□□□ -2,25
Ercc3P49135 Gm26274-201ENSMUST00000157103 321 ntBASIC0,97□□□□□ -2,25
Ercc3P49135 Gm24718-201ENSMUST00000157521 136 ntBASIC0,97□□□□□ -2,25
Retrieved 100 of 76,532 protein–RNA pairs in 103,1 ms