Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm42594-201ENSMUST00000199511 246 ntBASIC-0.64□□□□□ -2.51
Cdx2P43241 n-R5s94-201ENSMUST00000082573 119 ntBASIC-0.64□□□□□ -2.51
Cdx2P43241 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.64□□□□□ -2.51
Cdx2P43241 Gm14906-201ENSMUST00000119265 390 ntBASIC-0.65□□□□□ -2.51
Cdx2P43241 Gm25600-201ENSMUST00000158357 106 ntBASIC-0.65□□□□□ -2.51
Cdx2P43241 Gm24501-201ENSMUST00000158452 62 ntBASIC-0.65□□□□□ -2.51
Cdx2P43241 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.65□□□□□ -2.51
Cdx2P43241 Gm22450-201ENSMUST00000179641 107 ntBASIC-0.65□□□□□ -2.51
Cdx2P43241 Gm25473-201ENSMUST00000180191 107 ntBASIC-0.65□□□□□ -2.51
Cdx2P43241 Gm29665-201ENSMUST00000191457 528 ntBASIC-0.65□□□□□ -2.51
Cdx2P43241 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.65□□□□□ -2.51
Cdx2P43241 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.65□□□□□ -2.51
Cdx2P43241 Gm24856-201ENSMUST00000082809 107 ntBASIC-0.65□□□□□ -2.51
Cdx2P43241 Gm24521-201ENSMUST00000083958 107 ntBASIC-0.65□□□□□ -2.51
Cdx2P43241 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.66□□□□□ -2.52
Cdx2P43241 Mir669i-201ENSMUST00000117007 127 ntBASIC-0.66□□□□□ -2.52
Cdx2P43241 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.66□□□□□ -2.52
Cdx2P43241 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.66□□□□□ -2.52
Cdx2P43241 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.66□□□□□ -2.52
Cdx2P43241 Trav5-2-201ENSMUST00000199855 280 ntBASIC-0.66□□□□□ -2.52
Cdx2P43241 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.66□□□□□ -2.52
Cdx2P43241 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.66□□□□□ -2.52
Cdx2P43241 Mir574-201ENSMUST00000103854 78 ntBASIC-0.67□□□□□ -2.52
Cdx2P43241 Gm25769-201ENSMUST00000158569 127 ntBASIC-0.67□□□□□ -2.52
Cdx2P43241 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.67□□□□□ -2.52
Cdx2P43241 Gm24316-201ENSMUST00000083041 107 ntBASIC-0.67□□□□□ -2.52
Cdx2P43241 Gm24867-201ENSMUST00000104161 107 ntBASIC-0.68□□□□□ -2.52
Cdx2P43241 Gm25848-201ENSMUST00000116790 144 ntBASIC-0.68□□□□□ -2.52
Cdx2P43241 Gm22051-201ENSMUST00000117002 127 ntBASIC-0.68□□□□□ -2.52
Cdx2P43241 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.68□□□□□ -2.52
Cdx2P43241 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.68□□□□□ -2.52
Cdx2P43241 Gm23059-201ENSMUST00000158978 107 ntBASIC-0.68□□□□□ -2.52
Cdx2P43241 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.68□□□□□ -2.52
Cdx2P43241 Gm38295-201ENSMUST00000191951 151 ntBASIC-0.68□□□□□ -2.52
Cdx2P43241 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.68□□□□□ -2.52
Cdx2P43241 AC154296.2-201ENSMUST00000214696 545 ntBASIC-0.68□□□□□ -2.52
Cdx2P43241 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-0.69□□□□□ -2.52
Cdx2P43241 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.69□□□□□ -2.52
Cdx2P43241 AC125374.2-201ENSMUST00000214278 162 ntBASIC-0.69□□□□□ -2.52
Cdx2P43241 Mir96-201ENSMUST00000083652 106 ntBASIC-0.69□□□□□ -2.52
Cdx2P43241 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.7□□□□□ -2.52
Cdx2P43241 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.7□□□□□ -2.52
Cdx2P43241 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.7□□□□□ -2.52
Cdx2P43241 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.7□□□□□ -2.52
Cdx2P43241 Gm22332-201ENSMUST00000158072 126 ntBASIC-0.7□□□□□ -2.52
Cdx2P43241 Gm29512-201ENSMUST00000185544 315 ntBASIC-0.7□□□□□ -2.52
Cdx2P43241 Gm23056-201ENSMUST00000082803 111 ntBASIC-0.7□□□□□ -2.52
Cdx2P43241 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
Cdx2P43241 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.71□□□□□ -2.52
Cdx2P43241 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.71□□□□□ -2.52
Cdx2P43241 Gm25024-201ENSMUST00000179667 104 ntBASIC-0.71□□□□□ -2.52
Cdx2P43241 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-0.71□□□□□ -2.52
Cdx2P43241 AC164117.2-201ENSMUST00000222090 327 ntBASIC-0.71□□□□□ -2.52
Cdx2P43241 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
Cdx2P43241 mt-Tc-201ENSMUST00000082400 66 ntBASIC-0.71□□□□□ -2.52
Cdx2P43241 Gm25793-201ENSMUST00000083287 107 ntBASIC-0.71□□□□□ -2.52
Cdx2P43241 Mir218-1-201ENSMUST00000083669 110 ntBASIC-0.71□□□□□ -2.52
Cdx2P43241 Gm26420-201ENSMUST00000104273 103 ntBASIC-0.72□□□□□ -2.52
Cdx2P43241 Gm14567-201ENSMUST00000117155 174 ntBASIC-0.72□□□□□ -2.52
Cdx2P43241 Gm14919-201ENSMUST00000120839 390 ntBASIC-0.72□□□□□ -2.52
Cdx2P43241 Gm22433-201ENSMUST00000158550 142 ntBASIC-0.72□□□□□ -2.52
Cdx2P43241 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.72□□□□□ -2.52
Cdx2P43241 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.72□□□□□ -2.52
Cdx2P43241 Mir7093-201ENSMUST00000184195 101 ntBASIC-0.72□□□□□ -2.52
Cdx2P43241 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.73□□□□□ -2.53
Cdx2P43241 Snord100-201ENSMUST00000116836 74 ntBASIC-0.73□□□□□ -2.53
Cdx2P43241 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.73□□□□□ -2.53
Cdx2P43241 Gm24073-201ENSMUST00000158177 106 ntBASIC-0.73□□□□□ -2.53
Cdx2P43241 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
Cdx2P43241 Gm28016-201ENSMUST00000184594 196 ntBASIC-0.73□□□□□ -2.53
Cdx2P43241 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC-0.73□□□□□ -2.53
Cdx2P43241 Gm24929-201ENSMUST00000083403 139 ntBASIC-0.73□□□□□ -2.53
Cdx2P43241 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.74□□□□□ -2.53
Cdx2P43241 Gm24392-201ENSMUST00000158136 103 ntBASIC-0.74□□□□□ -2.53
Cdx2P43241 Gm24667-201ENSMUST00000158938 103 ntBASIC-0.74□□□□□ -2.53
Cdx2P43241 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.74□□□□□ -2.53
Cdx2P43241 Gm42622-201ENSMUST00000197229 355 ntBASIC-0.74□□□□□ -2.53
Cdx2P43241 Gm26202-201ENSMUST00000082910 65 ntBASIC-0.74□□□□□ -2.53
Cdx2P43241 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
Cdx2P43241 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.75□□□□□ -2.53
Cdx2P43241 Gm22790-201ENSMUST00000157229 129 ntBASIC-0.75□□□□□ -2.53
Cdx2P43241 Mir466m-201ENSMUST00000175052 84 ntBASIC-0.75□□□□□ -2.53
Cdx2P43241 Gm29140-201ENSMUST00000190187 476 ntBASIC-0.75□□□□□ -2.53
Cdx2P43241 Gm44338-201ENSMUST00000198614 110 ntBASIC-0.75□□□□□ -2.53
Cdx2P43241 Gm26255-201ENSMUST00000122492 103 ntBASIC-0.76□□□□□ -2.53
Cdx2P43241 Mir6928-201ENSMUST00000185166 70 ntBASIC-0.76□□□□□ -2.53
Cdx2P43241 Gm25588-201ENSMUST00000082501 140 ntBASIC-0.76□□□□□ -2.53
Cdx2P43241 Snora62-201ENSMUST00000082991 149 ntBASIC-0.76□□□□□ -2.53
Cdx2P43241 Gm22827-201ENSMUST00000083766 107 ntBASIC-0.76□□□□□ -2.53
Cdx2P43241 Gm26168-201ENSMUST00000083787 112 ntBASIC-0.76□□□□□ -2.53
Cdx2P43241 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.77□□□□□ -2.53
Cdx2P43241 Gm23253-201ENSMUST00000157441 104 ntBASIC-0.77□□□□□ -2.53
Cdx2P43241 Gm25364-201ENSMUST00000158851 107 ntBASIC-0.77□□□□□ -2.53
Cdx2P43241 Gm26359-201ENSMUST00000158873 101 ntBASIC-0.77□□□□□ -2.53
Cdx2P43241 Gm28008-201ENSMUST00000184021 186 ntBASIC-0.77□□□□□ -2.53
Cdx2P43241 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.77□□□□□ -2.53
Cdx2P43241 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.77□□□□□ -2.53
Cdx2P43241 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.77□□□□□ -2.53
Cdx2P43241 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.77□□□□□ -2.53
Cdx2P43241 Gm24524-201ENSMUST00000082925 170 ntBASIC-0.77□□□□□ -2.53
Retrieved 100 of 76,532 protein–RNA pairs in 163.2 ms