Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC164297.3-201ENSMUST00000224238 94 ntBASIC-1.78□□□□□ -2.69
HttP42859 Gm24042-201ENSMUST00000083114 103 ntBASIC-1.78□□□□□ -2.69
HttP42859 Gm22287-201ENSMUST00000083197 107 ntBASIC-1.78□□□□□ -2.69
HttP42859 Gm24635-201ENSMUST00000122712 128 ntBASIC-1.79□□□□□ -2.7
HttP42859 Gm45543-201ENSMUST00000209327 88 ntBASIC-1.79□□□□□ -2.7
HttP42859 Gm11407-201ENSMUST00000120362 1058 ntBASIC-1.8□□□□□ -2.7
HttP42859 Gm25705-201ENSMUST00000083119 104 ntBASIC-1.8□□□□□ -2.7
HttP42859 Gm26500-201ENSMUST00000101867 106 ntBASIC-1.8□□□□□ -2.7
HttP42859 Gm25024-201ENSMUST00000179667 104 ntBASIC-1.8□□□□□ -2.7
HttP42859 AC155712.1-201ENSMUST00000219704 160 ntBASIC-1.8□□□□□ -2.7
HttP42859 Gm23941-201ENSMUST00000101953 107 ntBASIC-1.81□□□□□ -2.7
HttP42859 Gm22720-201ENSMUST00000122710 87 ntBASIC-1.81□□□□□ -2.7
HttP42859 Gm25329-201ENSMUST00000158041 126 ntBASIC-1.81□□□□□ -2.7
HttP42859 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.81□□□□□ -2.7
HttP42859 Gm25870-201ENSMUST00000179845 79 ntBASIC-1.81□□□□□ -2.7
HttP42859 AC121844.1-201ENSMUST00000218706 137 ntBASIC-1.81□□□□□ -2.7
HttP42859 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC-1.81□□□□□ -2.7
HttP42859 Gm27510-201ENSMUST00000158214 64 ntBASIC-1.81□□□□□ -2.7
HttP42859 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-1.81□□□□□ -2.7
HttP42859 Gm42795-201ENSMUST00000198847 76 ntBASIC-1.81□□□□□ -2.7
HttP42859 AC168880.1-201ENSMUST00000225113 707 ntBASIC-1.82□□□□□ -2.7
HttP42859 Gm25943-201ENSMUST00000103791 90 ntBASIC-1.82□□□□□ -2.7
HttP42859 Mir466o-201ENSMUST00000104832 84 ntBASIC-1.82□□□□□ -2.7
HttP42859 Gm25056-201ENSMUST00000157372 62 ntBASIC-1.82□□□□□ -2.7
HttP42859 Mir466b-4-201ENSMUST00000178801 90 ntBASIC-1.82□□□□□ -2.7
HttP42859 Mir466b-6-201ENSMUST00000180061 90 ntBASIC-1.82□□□□□ -2.7
HttP42859 Mir23a-201ENSMUST00000083677 75 ntBASIC-1.82□□□□□ -2.7
HttP42859 Gm43884-201ENSMUST00000204251 559 ntBASIC-1.82□□□□□ -2.7
HttP42859 AC098718.2-201ENSMUST00000226822 285 ntBASIC-1.82□□□□□ -2.7
HttP42859 Gm25204-201ENSMUST00000082843 106 ntBASIC-1.83□□□□□ -2.7
HttP42859 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC-1.83□□□□□ -2.7
HttP42859 Gm44990-201ENSMUST00000203922 217 ntBASIC-1.83□□□□□ -2.7
HttP42859 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-1.83□□□□□ -2.7
HttP42859 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-1.83□□□□□ -2.7
HttP42859 Gm22308-201ENSMUST00000177609 107 ntBASIC-1.84□□□□□ -2.7
HttP42859 Gm23451-201ENSMUST00000083328 122 ntBASIC-1.84□□□□□ -2.7
HttP42859 Gm25078-201ENSMUST00000082530 107 ntBASIC-1.84□□□□□ -2.7
HttP42859 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-1.84□□□□□ -2.7
HttP42859 Gm26271-201ENSMUST00000158349 104 ntBASIC-1.84□□□□□ -2.7
HttP42859 AL603630.1-201ENSMUST00000214781 147 ntBASIC-1.84□□□□□ -2.7
HttP42859 n-R5s94-201ENSMUST00000082573 119 ntBASIC-1.84□□□□□ -2.7
HttP42859 Gm25284-201ENSMUST00000180345 141 ntBASIC-1.85□□□□□ -2.71
HttP42859 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-1.85□□□□□ -2.71
HttP42859 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC-1.85□□□□□ -2.71
HttP42859 Gm24037-201ENSMUST00000082871 180 ntBASIC-1.85□□□□□ -2.71
HttP42859 Gm24340-201ENSMUST00000104208 97 ntBASIC-1.85□□□□□ -2.71
HttP42859 Gm2768-201ENSMUST00000121062 250 ntBASIC-1.85□□□□□ -2.71
HttP42859 Gm17919-201ENSMUST00000173344 312 ntBASIC-1.85□□□□□ -2.71
HttP42859 Gm24417-201ENSMUST00000178123 79 ntBASIC-1.85□□□□□ -2.71
HttP42859 Gm24653-201ENSMUST00000178541 79 ntBASIC-1.85□□□□□ -2.71
HttP42859 Gm25934-201ENSMUST00000178642 79 ntBASIC-1.85□□□□□ -2.71
HttP42859 Gm22357-201ENSMUST00000082882 83 ntBASIC-1.85□□□□□ -2.71
HttP42859 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC-1.86□□□□□ -2.71
HttP42859 Gm22294-201ENSMUST00000083308 104 ntBASIC-1.86□□□□□ -2.71
HttP42859 Gm25538-201ENSMUST00000101943 107 ntBASIC-1.86□□□□□ -2.71
HttP42859 Gm23261-201ENSMUST00000158316 136 ntBASIC-1.86□□□□□ -2.71
HttP42859 Gm28917-201ENSMUST00000187294 237 ntBASIC-1.86□□□□□ -2.71
HttP42859 Mir494-201ENSMUST00000093632 85 ntBASIC-1.86□□□□□ -2.71
HttP42859 Gm24518-201ENSMUST00000180275 94 ntBASIC-1.86□□□□□ -2.71
HttP42859 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.86□□□□□ -2.71
HttP42859 Gm22693-201ENSMUST00000175049 442 ntBASIC-1.87□□□□□ -2.71
HttP42859 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-1.87□□□□□ -2.71
HttP42859 Gm27926-201ENSMUST00000157180 66 ntBASIC-1.87□□□□□ -2.71
HttP42859 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.87□□□□□ -2.71
HttP42859 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC-1.87□□□□□ -2.71
HttP42859 Gm24918-201ENSMUST00000083022 130 ntBASIC-1.87□□□□□ -2.71
HttP42859 Gm25410-201ENSMUST00000083758 137 ntBASIC-1.87□□□□□ -2.71
HttP42859 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-1.88□□□□□ -2.71
HttP42859 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1.88□□□□□ -2.71
HttP42859 Gm24223-201ENSMUST00000158827 90 ntBASIC-1.88□□□□□ -2.71
HttP42859 Gm22248-201ENSMUST00000082482 150 ntBASIC-1.88□□□□□ -2.71
HttP42859 Gm14599-201ENSMUST00000120469 474 ntBASIC-1.88□□□□□ -2.71
HttP42859 Gm22502-201ENSMUST00000082488 107 ntBASIC-1.88□□□□□ -2.71
HttP42859 Gm24492-201ENSMUST00000083798 107 ntBASIC-1.88□□□□□ -2.71
HttP42859 Gm22850-201ENSMUST00000157714 82 ntBASIC-1.88□□□□□ -2.71
HttP42859 Gm17054-201ENSMUST00000169811 259 ntBASIC-1.88□□□□□ -2.71
HttP42859 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC-1.88□□□□□ -2.71
HttP42859 AC192333.1-201ENSMUST00000224573 376 ntBASIC-1.88□□□□□ -2.71
HttP42859 Mir669d-2-201ENSMUST00000116854 86 ntBASIC-1.89□□□□□ -2.71
HttP42859 Gm22051-201ENSMUST00000117002 127 ntBASIC-1.89□□□□□ -2.71
HttP42859 Gm23661-201ENSMUST00000122630 87 ntBASIC-1.89□□□□□ -2.71
HttP42859 Gm38050-201ENSMUST00000191904 238 ntBASIC-1.89□□□□□ -2.71
HttP42859 AC164297.5-201ENSMUST00000224365 198 ntBASIC-1.89□□□□□ -2.71
HttP42859 AC167192.2-201ENSMUST00000224794 198 ntBASIC-1.89□□□□□ -2.71
HttP42859 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC-1.9□□□□□ -2.71
HttP42859 Gm22215-201ENSMUST00000157558 96 ntBASIC-1.9□□□□□ -2.71
HttP42859 Gm24854-201ENSMUST00000158025 98 ntBASIC-1.9□□□□□ -2.71
HttP42859 Mir181b-2-201ENSMUST00000083644 89 ntBASIC-1.9□□□□□ -2.71
HttP42859 Gm26000-201ENSMUST00000157991 107 ntBASIC-1.91□□□□□ -2.71
HttP42859 Gm28283-201ENSMUST00000185509 178 ntBASIC-1.91□□□□□ -2.71
HttP42859 Gm27490-201ENSMUST00000184754 128 ntBASIC-1.91□□□□□ -2.72
HttP42859 Gm26084-201ENSMUST00000157903 104 ntBASIC-1.91□□□□□ -2.72
HttP42859 AC134601.1-201ENSMUST00000221058 109 ntBASIC-1.91□□□□□ -2.72
HttP42859 Gm12785-201ENSMUST00000122052 172 ntBASIC-1.92□□□□□ -2.72
HttP42859 Gm25828-201ENSMUST00000157087 95 ntBASIC-1.92□□□□□ -2.72
HttP42859 Gm24440-201ENSMUST00000157236 63 ntBASIC-1.92□□□□□ -2.72
HttP42859 Gm24512-201ENSMUST00000174963 65 ntBASIC-1.92□□□□□ -2.72
HttP42859 Mir195b-201ENSMUST00000184814 97 ntBASIC-1.92□□□□□ -2.72
HttP42859 Gm42935-201ENSMUST00000202004 151 ntBASIC-1.92□□□□□ -2.72
HttP42859 Gm25285-201ENSMUST00000178951 90 ntBASIC-1.92□□□□□ -2.72
Retrieved 100 of 76,532 protein–RNA pairs in 210.9 ms