Protein–RNA interactions for Protein: P33215

Nedd1, Protein NEDD1, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1P33215 Mir3069-201ENSMUST00000198802 65 ntBASIC2.5□□□□□ -2.01
Nedd1P33215 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC2.5□□□□□ -2.01
Nedd1P33215 Gm24313-201ENSMUST00000082561 133 ntBASIC2.5□□□□□ -2.01
Nedd1P33215 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Nedd1P33215 Gm14884-201ENSMUST00000120456 196 ntBASIC2.49□□□□□ -2.01
Nedd1P33215 Gm24868-201ENSMUST00000157265 136 ntBASIC2.49□□□□□ -2.01
Nedd1P33215 Gm23996-201ENSMUST00000158062 131 ntBASIC2.49□□□□□ -2.01
Nedd1P33215 Gm24077-201ENSMUST00000158183 136 ntBASIC2.49□□□□□ -2.01
Nedd1P33215 Gm22947-201ENSMUST00000158559 91 ntBASIC2.49□□□□□ -2.01
Nedd1P33215 Gm25160-201ENSMUST00000158914 102 ntBASIC2.49□□□□□ -2.01
Nedd1P33215 Gm24333-201ENSMUST00000175101 84 ntBASIC2.49□□□□□ -2.01
Nedd1P33215 Gm23375-201ENSMUST00000175407 83 ntBASIC2.49□□□□□ -2.01
Nedd1P33215 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
Nedd1P33215 Gm23551-201ENSMUST00000116852 121 ntBASIC2.48□□□□□ -2.01
Nedd1P33215 Gm11966-201ENSMUST00000119907 87 ntBASIC2.48□□□□□ -2.01
Nedd1P33215 Gm26485-201ENSMUST00000158019 64 ntBASIC2.48□□□□□ -2.01
Nedd1P33215 Gm25241-201ENSMUST00000174909 84 ntBASIC2.48□□□□□ -2.01
Nedd1P33215 Gm26217-201ENSMUST00000175212 84 ntBASIC2.48□□□□□ -2.01
Nedd1P33215 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.48□□□□□ -2.01
Nedd1P33215 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
Nedd1P33215 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Nedd1P33215 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Nedd1P33215 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Nedd1P33215 Gm24399-201ENSMUST00000157869 74 ntBASIC2.47□□□□□ -2.01
Nedd1P33215 Gm24851-201ENSMUST00000158028 103 ntBASIC2.47□□□□□ -2.01
Nedd1P33215 Gm22159-201ENSMUST00000158412 130 ntBASIC2.47□□□□□ -2.01
Nedd1P33215 Gm22093-201ENSMUST00000158980 111 ntBASIC2.47□□□□□ -2.01
Nedd1P33215 Gm16550-201ENSMUST00000162550 126 ntBASIC2.47□□□□□ -2.01
Nedd1P33215 Gm5900-201ENSMUST00000179862 375 ntBASIC2.47□□□□□ -2.01
Nedd1P33215 Mir429-201ENSMUST00000083493 83 ntBASIC2.47□□□□□ -2.01
Nedd1P33215 Mir423-201ENSMUST00000083584 109 ntBASIC2.47□□□□□ -2.01
Nedd1P33215 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
Nedd1P33215 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.46□□□□□ -2.02
Nedd1P33215 Gm25402-201ENSMUST00000082966 131 ntBASIC2.46□□□□□ -2.02
Nedd1P33215 Mir93-201ENSMUST00000083593 88 ntBASIC2.46□□□□□ -2.02
Nedd1P33215 Gm24237-201ENSMUST00000157790 132 ntBASIC2.45□□□□□ -2.02
Nedd1P33215 Gm24900-201ENSMUST00000158128 134 ntBASIC2.45□□□□□ -2.02
Nedd1P33215 Gm24769-201ENSMUST00000158506 129 ntBASIC2.45□□□□□ -2.02
Nedd1P33215 Gm25044-201ENSMUST00000158603 104 ntBASIC2.45□□□□□ -2.02
Nedd1P33215 Mir6388-201ENSMUST00000184417 75 ntBASIC2.45□□□□□ -2.02
Nedd1P33215 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.45□□□□□ -2.02
Nedd1P33215 Gm23656-201ENSMUST00000122626 112 ntBASIC2.44□□□□□ -2.02
Nedd1P33215 Gm24575-201ENSMUST00000175502 77 ntBASIC2.44□□□□□ -2.02
Nedd1P33215 Mir30f-201ENSMUST00000196073 92 ntBASIC2.44□□□□□ -2.02
Nedd1P33215 Snora3-201ENSMUST00000083082 132 ntBASIC2.44□□□□□ -2.02
Nedd1P33215 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Nedd1P33215 Gm22750-201ENSMUST00000102076 103 ntBASIC2.43□□□□□ -2.02
Nedd1P33215 Gm26154-201ENSMUST00000102339 96 ntBASIC2.43□□□□□ -2.02
Nedd1P33215 Gm16328-201ENSMUST00000126985 196 ntBASIC2.43□□□□□ -2.02
Nedd1P33215 Gm16510-201ENSMUST00000153501 249 ntBASIC2.43□□□□□ -2.02
Nedd1P33215 Gm25011-201ENSMUST00000158398 126 ntBASIC2.43□□□□□ -2.02
Nedd1P33215 Gm26062-201ENSMUST00000083379 107 ntBASIC2.43□□□□□ -2.02
Nedd1P33215 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Nedd1P33215 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Nedd1P33215 Gm22227-201ENSMUST00000157356 259 ntBASIC2.42□□□□□ -2.02
Nedd1P33215 Gm25996-201ENSMUST00000175393 117 ntBASIC2.42□□□□□ -2.02
Nedd1P33215 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Nedd1P33215 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.42□□□□□ -2.02
Nedd1P33215 Gm15536-201ENSMUST00000121411 114 ntBASIC2.41□□□□□ -2.02
Nedd1P33215 Gm25014-201ENSMUST00000158401 103 ntBASIC2.41□□□□□ -2.02
Nedd1P33215 Gm22664-201ENSMUST00000158719 105 ntBASIC2.41□□□□□ -2.02
Nedd1P33215 Gm16539-201ENSMUST00000160086 327 ntBASIC2.41□□□□□ -2.02
Nedd1P33215 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.41□□□□□ -2.02
Nedd1P33215 Gm7258-201ENSMUST00000179317 300 ntBASIC2.41□□□□□ -2.02
Nedd1P33215 Gm45197-201ENSMUST00000205288 151 ntBASIC2.41□□□□□ -2.02
Nedd1P33215 Mir221-201ENSMUST00000083488 95 ntBASIC2.41□□□□□ -2.02
Nedd1P33215 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Nedd1P33215 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Nedd1P33215 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Nedd1P33215 Mir20b-201ENSMUST00000102087 80 ntBASIC2.4□□□□□ -2.03
Nedd1P33215 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Nedd1P33215 Gm22083-201ENSMUST00000157586 102 ntBASIC2.4□□□□□ -2.03
Nedd1P33215 Gm20477-201ENSMUST00000174028 280 ntBASIC2.4□□□□□ -2.03
Nedd1P33215 Gm23726-201ENSMUST00000178937 67 ntBASIC2.4□□□□□ -2.03
Nedd1P33215 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.4□□□□□ -2.03
Nedd1P33215 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.4□□□□□ -2.03
Nedd1P33215 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.4□□□□□ -2.03
Nedd1P33215 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.4□□□□□ -2.03
Nedd1P33215 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.4□□□□□ -2.03
Nedd1P33215 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2.4□□□□□ -2.03
Nedd1P33215 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC2.4□□□□□ -2.03
Nedd1P33215 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC2.4□□□□□ -2.03
Nedd1P33215 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC2.4□□□□□ -2.03
Nedd1P33215 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC2.4□□□□□ -2.03
Nedd1P33215 Gm7214-201ENSMUST00000222428 272 ntBASIC2.4□□□□□ -2.03
Nedd1P33215 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Nedd1P33215 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Nedd1P33215 Mir7232-201ENSMUST00000197929 74 ntBASIC2.39□□□□□ -2.03
Nedd1P33215 Gm22884-201ENSMUST00000083127 140 ntBASIC2.39□□□□□ -2.03
Nedd1P33215 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Nedd1P33215 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Nedd1P33215 Gm24098-201ENSMUST00000102075 109 ntBASIC2.38□□□□□ -2.03
Nedd1P33215 Gm25381-201ENSMUST00000102078 109 ntBASIC2.38□□□□□ -2.03
Nedd1P33215 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Nedd1P33215 Gm22666-201ENSMUST00000158717 164 ntBASIC2.38□□□□□ -2.03
Nedd1P33215 Snora24-201ENSMUST00000174989 130 ntBASIC2.38□□□□□ -2.03
Nedd1P33215 Gm27959-201ENSMUST00000185172 111 ntBASIC2.38□□□□□ -2.03
Nedd1P33215 Mir300-201ENSMUST00000083485 79 ntBASIC2.38□□□□□ -2.03
Nedd1P33215 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
Nedd1P33215 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms