Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm24238-201ENSMUST00000157792 98 ntBASIC0.35□□□□□ -2.35
Cd40lgP27548 Gm23080-201ENSMUST00000157846 103 ntBASIC0.35□□□□□ -2.35
Cd40lgP27548 Gm25161-201ENSMUST00000158913 132 ntBASIC0.35□□□□□ -2.35
Cd40lgP27548 Gm26116-201ENSMUST00000175600 77 ntBASIC0.35□□□□□ -2.35
Cd40lgP27548 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Cd40lgP27548 Gm25482-201ENSMUST00000083225 107 ntBASIC0.35□□□□□ -2.35
Cd40lgP27548 Mir302d-201ENSMUST00000083513 66 ntBASIC0.35□□□□□ -2.35
Cd40lgP27548 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.35□□□□□ -2.35
Cd40lgP27548 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
Cd40lgP27548 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.34□□□□□ -2.35
Cd40lgP27548 Gm23772-201ENSMUST00000104433 102 ntBASIC0.34□□□□□ -2.36
Cd40lgP27548 Gm22148-201ENSMUST00000104445 107 ntBASIC0.34□□□□□ -2.36
Cd40lgP27548 Gm25985-201ENSMUST00000122677 107 ntBASIC0.34□□□□□ -2.36
Cd40lgP27548 Gm15654-201ENSMUST00000152660 300 ntBASIC0.34□□□□□ -2.36
Cd40lgP27548 Mir7010-201ENSMUST00000183464 63 ntBASIC0.34□□□□□ -2.36
Cd40lgP27548 Mir6369-201ENSMUST00000183772 106 ntBASIC0.34□□□□□ -2.36
Cd40lgP27548 Gm27285-201ENSMUST00000183875 127 ntBASIC0.34□□□□□ -2.36
Cd40lgP27548 Gm27993-201ENSMUST00000184362 85 ntBASIC0.34□□□□□ -2.36
Cd40lgP27548 Gm24030-201ENSMUST00000083931 164 ntBASIC0.34□□□□□ -2.36
Cd40lgP27548 Gm25610-201ENSMUST00000104016 129 ntBASIC0.33□□□□□ -2.36
Cd40lgP27548 Scarna9-201ENSMUST00000104318 70 ntBASIC0.33□□□□□ -2.36
Cd40lgP27548 Gm25393-201ENSMUST00000157336 285 ntBASIC0.33□□□□□ -2.36
Cd40lgP27548 Gm27934-201ENSMUST00000158795 63 ntBASIC0.33□□□□□ -2.36
Cd40lgP27548 Gm37330-201ENSMUST00000192606 153 ntBASIC0.33□□□□□ -2.36
Cd40lgP27548 Mir30f-201ENSMUST00000196073 92 ntBASIC0.33□□□□□ -2.36
Cd40lgP27548 Gm44828-201ENSMUST00000203745 106 ntBASIC0.33□□□□□ -2.36
Cd40lgP27548 Gm44807-201ENSMUST00000206115 154 ntBASIC0.33□□□□□ -2.36
Cd40lgP27548 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.33□□□□□ -2.36
Cd40lgP27548 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Cd40lgP27548 Mir1899-201ENSMUST00000122798 96 ntBASIC0.32□□□□□ -2.36
Cd40lgP27548 Gm22340-201ENSMUST00000157717 114 ntBASIC0.32□□□□□ -2.36
Cd40lgP27548 Gm25247-201ENSMUST00000175475 90 ntBASIC0.32□□□□□ -2.36
Cd40lgP27548 Gm27465-201ENSMUST00000184290 91 ntBASIC0.32□□□□□ -2.36
Cd40lgP27548 Gm43381-201ENSMUST00000198553 165 ntBASIC0.32□□□□□ -2.36
Cd40lgP27548 Gm23301-201ENSMUST00000082713 65 ntBASIC0.32□□□□□ -2.36
Cd40lgP27548 Gm24640-201ENSMUST00000116949 126 ntBASIC0.31□□□□□ -2.36
Cd40lgP27548 Gm22626-201ENSMUST00000116990 126 ntBASIC0.31□□□□□ -2.36
Cd40lgP27548 Mir100-201ENSMUST00000175270 80 ntBASIC0.31□□□□□ -2.36
Cd40lgP27548 Gm24575-201ENSMUST00000175502 77 ntBASIC0.31□□□□□ -2.36
Cd40lgP27548 Gm24761-201ENSMUST00000179589 127 ntBASIC0.31□□□□□ -2.36
Cd40lgP27548 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.31□□□□□ -2.36
Cd40lgP27548 mt-Td-201ENSMUST00000082404 70 ntBASIC0.31□□□□□ -2.36
Cd40lgP27548 Snord60-201ENSMUST00000082834 78 ntBASIC0.31□□□□□ -2.36
Cd40lgP27548 Gm10172-201ENSMUST00000085929 558 ntBASIC0.31□□□□□ -2.36
Cd40lgP27548 Mir1197-201ENSMUST00000117037 120 ntBASIC0.29□□□□□ -2.36
Cd40lgP27548 Gm14626-201ENSMUST00000117619 216 ntBASIC0.29□□□□□ -2.36
Cd40lgP27548 Gm22706-201ENSMUST00000157907 112 ntBASIC0.29□□□□□ -2.36
Cd40lgP27548 Gm22983-201ENSMUST00000158308 104 ntBASIC0.29□□□□□ -2.36
Cd40lgP27548 Gm3702-201ENSMUST00000211754 346 ntBASIC0.29□□□□□ -2.36
Cd40lgP27548 Gm23969-201ENSMUST00000083324 74 ntBASIC0.29□□□□□ -2.36
Cd40lgP27548 Mir488-201ENSMUST00000093595 109 ntBASIC0.29□□□□□ -2.36
Cd40lgP27548 Gm23881-201ENSMUST00000116872 66 ntBASIC0.28□□□□□ -2.36
Cd40lgP27548 Gm26152-201ENSMUST00000157427 101 ntBASIC0.28□□□□□ -2.36
Cd40lgP27548 Gm10548-202ENSMUST00000165672 272 ntBASIC0.28□□□□□ -2.36
Cd40lgP27548 Gm20409-201ENSMUST00000173457 130 ntBASIC0.28□□□□□ -2.36
Cd40lgP27548 Gm26092-201ENSMUST00000179798 97 ntBASIC0.28□□□□□ -2.36
Cd40lgP27548 Mir669a-1-201ENSMUST00000180238 97 ntBASIC0.28□□□□□ -2.36
Cd40lgP27548 Gm27446-201ENSMUST00000183963 89 ntBASIC0.28□□□□□ -2.36
Cd40lgP27548 Mir7077-201ENSMUST00000183991 57 ntBASIC0.28□□□□□ -2.36
Cd40lgP27548 Gm27980-201ENSMUST00000184094 169 ntBASIC0.28□□□□□ -2.36
Cd40lgP27548 Mir3969-201ENSMUST00000197106 92 ntBASIC0.28□□□□□ -2.36
Cd40lgP27548 Snord80-202ENSMUST00000199023 77 ntBASIC0.28□□□□□ -2.36
Cd40lgP27548 Gm45002-201ENSMUST00000208045 120 ntBASIC0.28□□□□□ -2.36
Cd40lgP27548 Gm45541-201ENSMUST00000210443 54 ntBASIC0.28□□□□□ -2.36
Cd40lgP27548 Mir200a-201ENSMUST00000083466 90 ntBASIC0.28□□□□□ -2.36
Cd40lgP27548 Mir224-201ENSMUST00000083608 82 ntBASIC0.28□□□□□ -2.36
Cd40lgP27548 Gm24445-201ENSMUST00000083981 107 ntBASIC0.28□□□□□ -2.36
Cd40lgP27548 Mir20b-201ENSMUST00000102087 80 ntBASIC0.27□□□□□ -2.37
Cd40lgP27548 Gm24835-201ENSMUST00000116777 111 ntBASIC0.27□□□□□ -2.37
Cd40lgP27548 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.27□□□□□ -2.37
Cd40lgP27548 Gm23859-201ENSMUST00000158383 64 ntBASIC0.27□□□□□ -2.37
Cd40lgP27548 Mir7657-201ENSMUST00000196051 57 ntBASIC0.27□□□□□ -2.37
Cd40lgP27548 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.27□□□□□ -2.37
Cd40lgP27548 Gm24208-201ENSMUST00000082783 135 ntBASIC0.27□□□□□ -2.37
Cd40lgP27548 Gm14502-201ENSMUST00000118154 113 ntBASIC0.26□□□□□ -2.37
Cd40lgP27548 Mir1898-201ENSMUST00000122643 83 ntBASIC0.26□□□□□ -2.37
Cd40lgP27548 Gm26158-201ENSMUST00000158973 119 ntBASIC0.26□□□□□ -2.37
Cd40lgP27548 Gm23917-201ENSMUST00000175256 98 ntBASIC0.26□□□□□ -2.37
Cd40lgP27548 Gm26426-201ENSMUST00000177866 123 ntBASIC0.26□□□□□ -2.37
Cd40lgP27548 Gm22259-201ENSMUST00000178926 107 ntBASIC0.26□□□□□ -2.37
Cd40lgP27548 Gm26060-201ENSMUST00000180094 123 ntBASIC0.26□□□□□ -2.37
Cd40lgP27548 Gm44469-201ENSMUST00000198558 79 ntBASIC0.26□□□□□ -2.37
Cd40lgP27548 Gm5002-201ENSMUST00000207145 223 ntBASIC0.26□□□□□ -2.37
Cd40lgP27548 AC154390.1-201ENSMUST00000225629 277 ntBASIC0.26□□□□□ -2.37
Cd40lgP27548 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.26□□□□□ -2.37
Cd40lgP27548 Gm26204-201ENSMUST00000082906 107 ntBASIC0.26□□□□□ -2.37
Cd40lgP27548 Mir377-201ENSMUST00000083504 68 ntBASIC0.26□□□□□ -2.37
Cd40lgP27548 Gm24232-201ENSMUST00000104314 132 ntBASIC0.25□□□□□ -2.37
Cd40lgP27548 Gm24288-201ENSMUST00000157630 144 ntBASIC0.25□□□□□ -2.37
Cd40lgP27548 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.25□□□□□ -2.37
Cd40lgP27548 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.25□□□□□ -2.37
Cd40lgP27548 Mir471-201ENSMUST00000093596 67 ntBASIC0.25□□□□□ -2.37
Cd40lgP27548 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.25□□□□□ -2.37
Cd40lgP27548 Mir710-201ENSMUST00000102088 110 ntBASIC0.24□□□□□ -2.37
Cd40lgP27548 Gm25375-201ENSMUST00000158157 135 ntBASIC0.24□□□□□ -2.37
Cd40lgP27548 Gm22520-201ENSMUST00000158269 129 ntBASIC0.24□□□□□ -2.37
Cd40lgP27548 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.24□□□□□ -2.37
Cd40lgP27548 Gm12469-201ENSMUST00000117623 207 ntBASIC0.23□□□□□ -2.37
Cd40lgP27548 Gm23857-201ENSMUST00000158379 111 ntBASIC0.23□□□□□ -2.37
Cd40lgP27548 Gm22239-201ENSMUST00000175220 103 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 143.4 ms