Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Msx1P13297 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Msx1P13297 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
Msx1P13297 Scarna9-201ENSMUST00000104318 70 ntBASIC2.53□□□□□ -2
Msx1P13297 Gm22200-201ENSMUST00000158614 67 ntBASIC2.53□□□□□ -2
Msx1P13297 Mir3075-201ENSMUST00000175340 85 ntBASIC2.53□□□□□ -2
Msx1P13297 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.53□□□□□ -2
Msx1P13297 Gm22622-201ENSMUST00000082870 129 ntBASIC2.53□□□□□ -2
Msx1P13297 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Msx1P13297 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Msx1P13297 Mir1191-201ENSMUST00000116883 120 ntBASIC2.52□□□□□ -2.01
Msx1P13297 Gm26133-201ENSMUST00000157363 100 ntBASIC2.52□□□□□ -2.01
Msx1P13297 Gm25866-201ENSMUST00000158245 112 ntBASIC2.52□□□□□ -2.01
Msx1P13297 Gm21885-201ENSMUST00000178891 327 ntBASIC2.52□□□□□ -2.01
Msx1P13297 Mir6386-201ENSMUST00000183558 104 ntBASIC2.52□□□□□ -2.01
Msx1P13297 Gm27786-201ENSMUST00000184337 70 ntBASIC2.52□□□□□ -2.01
Msx1P13297 Mir6419-201ENSMUST00000184784 113 ntBASIC2.52□□□□□ -2.01
Msx1P13297 Gm28256-201ENSMUST00000188953 139 ntBASIC2.52□□□□□ -2.01
Msx1P13297 Gm28559-201ENSMUST00000190532 139 ntBASIC2.52□□□□□ -2.01
Msx1P13297 Mir127-201ENSMUST00000093568 70 ntBASIC2.52□□□□□ -2.01
Msx1P13297 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.52□□□□□ -2.01
Msx1P13297 Mir3086-201ENSMUST00000175072 87 ntBASIC2.51□□□□□ -2.01
Msx1P13297 Gm25470-201ENSMUST00000175576 111 ntBASIC2.51□□□□□ -2.01
Msx1P13297 Mir8103-201ENSMUST00000183945 107 ntBASIC2.51□□□□□ -2.01
Msx1P13297 Gm27979-201ENSMUST00000185126 56 ntBASIC2.51□□□□□ -2.01
Msx1P13297 Mir532-201ENSMUST00000093630 96 ntBASIC2.51□□□□□ -2.01
Msx1P13297 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Msx1P13297 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.5□□□□□ -2.01
Msx1P13297 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.5□□□□□ -2.01
Msx1P13297 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.5□□□□□ -2.01
Msx1P13297 Mir542-201ENSMUST00000102186 85 ntBASIC2.5□□□□□ -2.01
Msx1P13297 Gm16171-201ENSMUST00000118004 324 ntBASIC2.5□□□□□ -2.01
Msx1P13297 Gm11966-201ENSMUST00000119907 87 ntBASIC2.5□□□□□ -2.01
Msx1P13297 Gm25945-201ENSMUST00000122484 135 ntBASIC2.5□□□□□ -2.01
Msx1P13297 Gm26485-201ENSMUST00000158019 64 ntBASIC2.5□□□□□ -2.01
Msx1P13297 Gm26358-201ENSMUST00000158215 97 ntBASIC2.5□□□□□ -2.01
Msx1P13297 Gm23208-201ENSMUST00000158666 127 ntBASIC2.5□□□□□ -2.01
Msx1P13297 Gm27959-201ENSMUST00000185172 111 ntBASIC2.5□□□□□ -2.01
Msx1P13297 Gm25705-201ENSMUST00000083119 104 ntBASIC2.5□□□□□ -2.01
Msx1P13297 Gm24907-201ENSMUST00000116932 128 ntBASIC2.49□□□□□ -2.01
Msx1P13297 Gm5900-201ENSMUST00000179862 375 ntBASIC2.49□□□□□ -2.01
Msx1P13297 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Msx1P13297 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Msx1P13297 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Msx1P13297 Gm26473-201ENSMUST00000116763 127 ntBASIC2.48□□□□□ -2.01
Msx1P13297 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC2.48□□□□□ -2.01
Msx1P13297 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
Msx1P13297 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Msx1P13297 Gm24769-201ENSMUST00000158506 129 ntBASIC2.47□□□□□ -2.01
Msx1P13297 Gm24082-201ENSMUST00000175175 83 ntBASIC2.47□□□□□ -2.01
Msx1P13297 Gm43626-201ENSMUST00000198575 162 ntBASIC2.47□□□□□ -2.01
Msx1P13297 Gm26207-201ENSMUST00000082909 104 ntBASIC2.47□□□□□ -2.01
Msx1P13297 Mir300-201ENSMUST00000083485 79 ntBASIC2.47□□□□□ -2.01
Msx1P13297 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
Msx1P13297 Gm26015-201ENSMUST00000104402 125 ntBASIC2.46□□□□□ -2.02
Msx1P13297 Gm23803-201ENSMUST00000104610 132 ntBASIC2.46□□□□□ -2.02
Msx1P13297 Gm11694-201ENSMUST00000118637 159 ntBASIC2.46□□□□□ -2.02
Msx1P13297 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC2.46□□□□□ -2.02
Msx1P13297 Gm37807-201ENSMUST00000194310 190 ntBASIC2.46□□□□□ -2.02
Msx1P13297 AC122769.2-201ENSMUST00000227248 302 ntBASIC2.46□□□□□ -2.02
Msx1P13297 Gm6293-201ENSMUST00000050339 195 ntBASIC2.46□□□□□ -2.02
Msx1P13297 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC2.46□□□□□ -2.02
Msx1P13297 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
Msx1P13297 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Msx1P13297 Gm23551-201ENSMUST00000116852 121 ntBASIC2.45□□□□□ -2.02
Msx1P13297 Gm26406-201ENSMUST00000158503 124 ntBASIC2.45□□□□□ -2.02
Msx1P13297 Gm28435-201ENSMUST00000185496 108 ntBASIC2.45□□□□□ -2.02
Msx1P13297 Gm19257-201ENSMUST00000186121 183 ntBASIC2.45□□□□□ -2.02
Msx1P13297 Gm29047-201ENSMUST00000189816 108 ntBASIC2.45□□□□□ -2.02
Msx1P13297 AC157602.1-201ENSMUST00000197446 105 ntBASIC2.45□□□□□ -2.02
Msx1P13297 Snord43-201ENSMUST00000199549 108 ntBASIC2.45□□□□□ -2.02
Msx1P13297 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Msx1P13297 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Msx1P13297 Gm23482-201ENSMUST00000104172 122 ntBASIC2.44□□□□□ -2.02
Msx1P13297 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Msx1P13297 Gm24686-201ENSMUST00000157755 93 ntBASIC2.44□□□□□ -2.02
Msx1P13297 Gm23763-201ENSMUST00000158345 60 ntBASIC2.44□□□□□ -2.02
Msx1P13297 Gm23726-201ENSMUST00000178937 67 ntBASIC2.44□□□□□ -2.02
Msx1P13297 Gm28767-201ENSMUST00000188601 114 ntBASIC2.44□□□□□ -2.02
Msx1P13297 Mir151-201ENSMUST00000083678 68 ntBASIC2.44□□□□□ -2.02
Msx1P13297 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
Msx1P13297 Gm15536-201ENSMUST00000121411 114 ntBASIC2.43□□□□□ -2.02
Msx1P13297 Gm23889-201ENSMUST00000122689 104 ntBASIC2.43□□□□□ -2.02
Msx1P13297 Gm24210-201ENSMUST00000158263 133 ntBASIC2.43□□□□□ -2.02
Msx1P13297 Gm22416-201ENSMUST00000158590 88 ntBASIC2.43□□□□□ -2.02
Msx1P13297 Gm25119-201ENSMUST00000158815 88 ntBASIC2.43□□□□□ -2.02
Msx1P13297 Gm26499-201ENSMUST00000178544 79 ntBASIC2.43□□□□□ -2.02
Msx1P13297 Gm26096-201ENSMUST00000179084 79 ntBASIC2.43□□□□□ -2.02
Msx1P13297 Gm25629-201ENSMUST00000084001 107 ntBASIC2.43□□□□□ -2.02
Msx1P13297 Gm23951-201ENSMUST00000104029 132 ntBASIC2.42□□□□□ -2.02
Msx1P13297 Gm26411-201ENSMUST00000157668 107 ntBASIC2.42□□□□□ -2.02
Msx1P13297 Gm22944-201ENSMUST00000158662 133 ntBASIC2.42□□□□□ -2.02
Msx1P13297 Mir6390-201ENSMUST00000184405 129 ntBASIC2.42□□□□□ -2.02
Msx1P13297 Gm44602-201ENSMUST00000205948 132 ntBASIC2.42□□□□□ -2.02
Msx1P13297 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.42□□□□□ -2.02
Msx1P13297 Gm23377-201ENSMUST00000082943 126 ntBASIC2.42□□□□□ -2.02
Msx1P13297 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Msx1P13297 Mir5104-201ENSMUST00000175319 94 ntBASIC2.41□□□□□ -2.02
Msx1P13297 Mir7683-201ENSMUST00000183842 61 ntBASIC2.41□□□□□ -2.02
Msx1P13297 Mir29a-201ENSMUST00000083676 88 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 167.9 ms