Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Mir881-201ENSMUST00000104844 78 ntBASIC-0.04□□□□□ -2.42
Lire1P11260 Gm28020-201ENSMUST00000157739 67 ntBASIC-0.04□□□□□ -2.42
Lire1P11260 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.04□□□□□ -2.42
Lire1P11260 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.04□□□□□ -2.42
Lire1P11260 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.04□□□□□ -2.42
Lire1P11260 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.04□□□□□ -2.42
Lire1P11260 AC134601.1-201ENSMUST00000221058 109 ntBASIC-0.04□□□□□ -2.42
Lire1P11260 CT030645.1-201ENSMUST00000224020 231 ntBASIC-0.04□□□□□ -2.42
Lire1P11260 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.04□□□□□ -2.42
Lire1P11260 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
Lire1P11260 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.05□□□□□ -2.42
Lire1P11260 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.05□□□□□ -2.42
Lire1P11260 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.05□□□□□ -2.42
Lire1P11260 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.05□□□□□ -2.42
Lire1P11260 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.05□□□□□ -2.42
Lire1P11260 AC192091.2-201ENSMUST00000217869 117 ntBASIC-0.05□□□□□ -2.42
Lire1P11260 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.05□□□□□ -2.42
Lire1P11260 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
Lire1P11260 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.05□□□□□ -2.42
Lire1P11260 Gm14883-201ENSMUST00000120179 157 ntBASIC-0.06□□□□□ -2.42
Lire1P11260 Gm22790-201ENSMUST00000157229 129 ntBASIC-0.06□□□□□ -2.42
Lire1P11260 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.06□□□□□ -2.42
Lire1P11260 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.06□□□□□ -2.42
Lire1P11260 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.06□□□□□ -2.42
Lire1P11260 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.06□□□□□ -2.42
Lire1P11260 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.07□□□□□ -2.42
Lire1P11260 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
Lire1P11260 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.07□□□□□ -2.42
Lire1P11260 Snord19-201ENSMUST00000104609 76 ntBASIC-0.07□□□□□ -2.42
Lire1P11260 Gm23841-201ENSMUST00000116951 114 ntBASIC-0.07□□□□□ -2.42
Lire1P11260 Gm22850-201ENSMUST00000157714 82 ntBASIC-0.07□□□□□ -2.42
Lire1P11260 Gm24238-201ENSMUST00000157792 98 ntBASIC-0.07□□□□□ -2.42
Lire1P11260 Gm22332-201ENSMUST00000158072 126 ntBASIC-0.07□□□□□ -2.42
Lire1P11260 Gm24761-201ENSMUST00000179589 127 ntBASIC-0.07□□□□□ -2.42
Lire1P11260 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.07□□□□□ -2.42
Lire1P11260 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.07□□□□□ -2.42
Lire1P11260 Gm45859-201ENSMUST00000212794 214 ntBASIC-0.07□□□□□ -2.42
Lire1P11260 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
Lire1P11260 Gm24762-201ENSMUST00000083689 104 ntBASIC-0.07□□□□□ -2.42
Lire1P11260 Gm24121-201ENSMUST00000102029 106 ntBASIC-0.08□□□□□ -2.42
Lire1P11260 Mir541-201ENSMUST00000102097 90 ntBASIC-0.08□□□□□ -2.42
Lire1P11260 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.08□□□□□ -2.42
Lire1P11260 Gm6897-201ENSMUST00000117714 138 ntBASIC-0.08□□□□□ -2.42
Lire1P11260 Gm14758-201ENSMUST00000119104 138 ntBASIC-0.08□□□□□ -2.42
Lire1P11260 Gm26279-201ENSMUST00000157095 102 ntBASIC-0.08□□□□□ -2.42
Lire1P11260 Gm24724-201ENSMUST00000158230 107 ntBASIC-0.08□□□□□ -2.42
Lire1P11260 Trav5-2-201ENSMUST00000199855 280 ntBASIC-0.08□□□□□ -2.42
Lire1P11260 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.08□□□□□ -2.42
Lire1P11260 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.08□□□□□ -2.42
Lire1P11260 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.09□□□□□ -2.42
Lire1P11260 Mir466f-2-201ENSMUST00000104805 94 ntBASIC-0.09□□□□□ -2.42
Lire1P11260 Gm25015-201ENSMUST00000158400 128 ntBASIC-0.09□□□□□ -2.42
Lire1P11260 Gm22433-201ENSMUST00000158550 142 ntBASIC-0.09□□□□□ -2.42
Lire1P11260 Mir6928-201ENSMUST00000185166 70 ntBASIC-0.09□□□□□ -2.42
Lire1P11260 Mir191-201ENSMUST00000196210 74 ntBASIC-0.09□□□□□ -2.42
Lire1P11260 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.09□□□□□ -2.42
Lire1P11260 mt-Ti-201ENSMUST00000082393 69 ntBASIC-0.09□□□□□ -2.42
Lire1P11260 Mir9-2-201ENSMUST00000083490 72 ntBASIC-0.09□□□□□ -2.42
Lire1P11260 Gm24729-201ENSMUST00000158225 137 ntBASIC-0.1□□□□□ -2.43
Lire1P11260 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.1□□□□□ -2.43
Lire1P11260 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.1□□□□□ -2.43
Lire1P11260 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.1□□□□□ -2.43
Lire1P11260 AC165157.3-201ENSMUST00000220815 103 ntBASIC-0.1□□□□□ -2.43
Lire1P11260 Gm22744-201ENSMUST00000083444 65 ntBASIC-0.1□□□□□ -2.43
Lire1P11260 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.11□□□□□ -2.43
Lire1P11260 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC-0.11□□□□□ -2.43
Lire1P11260 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.11□□□□□ -2.43
Lire1P11260 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.11□□□□□ -2.43
Lire1P11260 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.11□□□□□ -2.43
Lire1P11260 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.11□□□□□ -2.43
Lire1P11260 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.11□□□□□ -2.43
Lire1P11260 Mir669a-7-201ENSMUST00000180364 87 ntBASIC-0.11□□□□□ -2.43
Lire1P11260 Gm27476-201ENSMUST00000183366 104 ntBASIC-0.11□□□□□ -2.43
Lire1P11260 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.11□□□□□ -2.43
Lire1P11260 Mir669a-6-201ENSMUST00000196127 87 ntBASIC-0.11□□□□□ -2.43
Lire1P11260 Mir669a-12-201ENSMUST00000197274 87 ntBASIC-0.11□□□□□ -2.43
Lire1P11260 Mir669a-5-201ENSMUST00000197439 87 ntBASIC-0.11□□□□□ -2.43
Lire1P11260 Mir669a-10-201ENSMUST00000197745 87 ntBASIC-0.11□□□□□ -2.43
Lire1P11260 Mir669a-11-201ENSMUST00000197952 87 ntBASIC-0.11□□□□□ -2.43
Lire1P11260 Mir669a-4-201ENSMUST00000198665 87 ntBASIC-0.11□□□□□ -2.43
Lire1P11260 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.11□□□□□ -2.43
Lire1P11260 Mir669a-9-201ENSMUST00000200087 87 ntBASIC-0.11□□□□□ -2.43
Lire1P11260 Mir669a-8-201ENSMUST00000200268 87 ntBASIC-0.11□□□□□ -2.43
Lire1P11260 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.11□□□□□ -2.43
Lire1P11260 Gm22079-201ENSMUST00000157592 106 ntBASIC-0.12□□□□□ -2.43
Lire1P11260 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.12□□□□□ -2.43
Lire1P11260 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
Lire1P11260 Gm23047-201ENSMUST00000177661 94 ntBASIC-0.12□□□□□ -2.43
Lire1P11260 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.12□□□□□ -2.43
Lire1P11260 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.12□□□□□ -2.43
Lire1P11260 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.12□□□□□ -2.43
Lire1P11260 CT030166.3-201ENSMUST00000223203 193 ntBASIC-0.12□□□□□ -2.43
Lire1P11260 Gm22145-201ENSMUST00000157396 148 ntBASIC-0.13□□□□□ -2.43
Lire1P11260 Gm26360-201ENSMUST00000158872 103 ntBASIC-0.13□□□□□ -2.43
Lire1P11260 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.13□□□□□ -2.43
Lire1P11260 Mir7657-201ENSMUST00000196051 57 ntBASIC-0.13□□□□□ -2.43
Lire1P11260 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.13□□□□□ -2.43
Lire1P11260 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.14□□□□□ -2.43
Lire1P11260 Gm23892-201ENSMUST00000158105 130 ntBASIC-0.14□□□□□ -2.43
Lire1P11260 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms