Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Snord78-201ENSMUST00000104032 66 ntBASIC1.51□□□□□ -2.17
Col3a1P08121 Gm11792-201ENSMUST00000120640 168 ntBASIC1.51□□□□□ -2.17
Col3a1P08121 Gm25887-201ENSMUST00000157777 84 ntBASIC1.51□□□□□ -2.17
Col3a1P08121 Gm25371-201ENSMUST00000158162 101 ntBASIC1.51□□□□□ -2.17
Col3a1P08121 Gm22515-201ENSMUST00000158273 305 ntBASIC1.51□□□□□ -2.17
Col3a1P08121 Gm24947-201ENSMUST00000158334 110 ntBASIC1.51□□□□□ -2.17
Col3a1P08121 Gm25768-201ENSMUST00000158570 98 ntBASIC1.51□□□□□ -2.17
Col3a1P08121 Gm25633-201ENSMUST00000178565 107 ntBASIC1.51□□□□□ -2.17
Col3a1P08121 Mir6928-201ENSMUST00000185166 70 ntBASIC1.51□□□□□ -2.17
Col3a1P08121 Gm24165-201ENSMUST00000082718 128 ntBASIC1.51□□□□□ -2.17
Col3a1P08121 Gm22805-201ENSMUST00000082739 107 ntBASIC1.51□□□□□ -2.17
Col3a1P08121 Gm23790-201ENSMUST00000083013 107 ntBASIC1.51□□□□□ -2.17
Col3a1P08121 Gm24049-201ENSMUST00000102409 100 ntBASIC1.5□□□□□ -2.17
Col3a1P08121 Gm14674-201ENSMUST00000117816 342 ntBASIC1.5□□□□□ -2.17
Col3a1P08121 Gm12309-201ENSMUST00000119889 182 ntBASIC1.5□□□□□ -2.17
Col3a1P08121 Gm23983-201ENSMUST00000157142 114 ntBASIC1.5□□□□□ -2.17
Col3a1P08121 Gm22731-201ENSMUST00000158086 94 ntBASIC1.5□□□□□ -2.17
Col3a1P08121 Gm23898-201ENSMUST00000158111 103 ntBASIC1.5□□□□□ -2.17
Col3a1P08121 Gm25711-201ENSMUST00000158633 128 ntBASIC1.5□□□□□ -2.17
Col3a1P08121 Snora41-201ENSMUST00000082668 132 ntBASIC1.5□□□□□ -2.17
Col3a1P08121 Mir34a-201ENSMUST00000083559 102 ntBASIC1.5□□□□□ -2.17
Col3a1P08121 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Col3a1P08121 Gm23788-201ENSMUST00000122535 106 ntBASIC1.5□□□□□ -2.17
Col3a1P08121 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.5□□□□□ -2.17
Col3a1P08121 Gm45386-201ENSMUST00000210194 218 ntBASIC1.5□□□□□ -2.17
Col3a1P08121 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.5□□□□□ -2.17
Col3a1P08121 Gm24038-201ENSMUST00000082872 159 ntBASIC1.5□□□□□ -2.17
Col3a1P08121 Gm22354-201ENSMUST00000083919 70 ntBASIC1.5□□□□□ -2.17
Col3a1P08121 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.49□□□□□ -2.17
Col3a1P08121 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Col3a1P08121 Gm24250-201ENSMUST00000157320 135 ntBASIC1.49□□□□□ -2.17
Col3a1P08121 Gm22332-201ENSMUST00000158072 126 ntBASIC1.49□□□□□ -2.17
Col3a1P08121 Gm23770-201ENSMUST00000178009 108 ntBASIC1.49□□□□□ -2.17
Col3a1P08121 Gm22832-201ENSMUST00000178022 108 ntBASIC1.49□□□□□ -2.17
Col3a1P08121 Gm23863-201ENSMUST00000178265 108 ntBASIC1.49□□□□□ -2.17
Col3a1P08121 Gm24828-201ENSMUST00000178507 108 ntBASIC1.49□□□□□ -2.17
Col3a1P08121 Gm23052-201ENSMUST00000178633 108 ntBASIC1.49□□□□□ -2.17
Col3a1P08121 Gm25729-201ENSMUST00000179050 108 ntBASIC1.49□□□□□ -2.17
Col3a1P08121 Gm25359-201ENSMUST00000179315 108 ntBASIC1.49□□□□□ -2.17
Col3a1P08121 Gm22624-201ENSMUST00000179913 108 ntBASIC1.49□□□□□ -2.17
Col3a1P08121 Gm27265-201ENSMUST00000183559 77 ntBASIC1.49□□□□□ -2.17
Col3a1P08121 Gm22283-201ENSMUST00000082556 161 ntBASIC1.49□□□□□ -2.17
Col3a1P08121 Mir29c-201ENSMUST00000083614 88 ntBASIC1.49□□□□□ -2.17
Col3a1P08121 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.48□□□□□ -2.17
Col3a1P08121 Gm20409-201ENSMUST00000173457 130 ntBASIC1.48□□□□□ -2.17
Col3a1P08121 Gm42807-201ENSMUST00000200141 329 ntBASIC1.48□□□□□ -2.17
Col3a1P08121 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
Col3a1P08121 Gm45544-201ENSMUST00000211130 88 ntBASIC1.48□□□□□ -2.17
Col3a1P08121 Mir10b-201ENSMUST00000083566 68 ntBASIC1.48□□□□□ -2.17
Col3a1P08121 Gm22469-201ENSMUST00000104118 133 ntBASIC1.47□□□□□ -2.17
Col3a1P08121 Mir466l-201ENSMUST00000104866 121 ntBASIC1.47□□□□□ -2.17
Col3a1P08121 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.47□□□□□ -2.17
Col3a1P08121 Gm22319-201ENSMUST00000157147 122 ntBASIC1.47□□□□□ -2.17
Col3a1P08121 Gm23349-201ENSMUST00000158432 98 ntBASIC1.47□□□□□ -2.17
Col3a1P08121 Gm23384-201ENSMUST00000158593 103 ntBASIC1.47□□□□□ -2.17
Col3a1P08121 Gm25996-201ENSMUST00000175393 117 ntBASIC1.47□□□□□ -2.17
Col3a1P08121 Mir93-201ENSMUST00000083593 88 ntBASIC1.47□□□□□ -2.17
Col3a1P08121 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Col3a1P08121 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.47□□□□□ -2.17
Col3a1P08121 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Col3a1P08121 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.46□□□□□ -2.18
Col3a1P08121 Gm25884-201ENSMUST00000157782 62 ntBASIC1.46□□□□□ -2.18
Col3a1P08121 Gm24238-201ENSMUST00000157792 98 ntBASIC1.46□□□□□ -2.18
Col3a1P08121 Gm22535-201ENSMUST00000158174 119 ntBASIC1.46□□□□□ -2.18
Col3a1P08121 Gm44325-201ENSMUST00000196757 77 ntBASIC1.46□□□□□ -2.18
Col3a1P08121 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.46□□□□□ -2.18
Col3a1P08121 Mir301-201ENSMUST00000083655 86 ntBASIC1.46□□□□□ -2.18
Col3a1P08121 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.46□□□□□ -2.18
Col3a1P08121 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Col3a1P08121 Gm23390-201ENSMUST00000157393 106 ntBASIC1.45□□□□□ -2.18
Col3a1P08121 Gm22338-201ENSMUST00000157715 129 ntBASIC1.45□□□□□ -2.18
Col3a1P08121 Gm24345-201ENSMUST00000158706 124 ntBASIC1.45□□□□□ -2.18
Col3a1P08121 Gm25368-201ENSMUST00000158847 131 ntBASIC1.45□□□□□ -2.18
Col3a1P08121 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Col3a1P08121 Gm27878-201ENSMUST00000184000 106 ntBASIC1.45□□□□□ -2.18
Col3a1P08121 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Col3a1P08121 Gm25697-201ENSMUST00000082902 98 ntBASIC1.45□□□□□ -2.18
Col3a1P08121 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.44□□□□□ -2.18
Col3a1P08121 Gm25112-201ENSMUST00000122680 104 ntBASIC1.44□□□□□ -2.18
Col3a1P08121 Gm22770-201ENSMUST00000158368 67 ntBASIC1.44□□□□□ -2.18
Col3a1P08121 Gm23854-201ENSMUST00000158378 108 ntBASIC1.44□□□□□ -2.18
Col3a1P08121 Gm23181-201ENSMUST00000158685 110 ntBASIC1.44□□□□□ -2.18
Col3a1P08121 Mir3961-201ENSMUST00000198795 59 ntBASIC1.44□□□□□ -2.18
Col3a1P08121 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.44□□□□□ -2.18
Col3a1P08121 AC122327.1-201ENSMUST00000220778 108 ntBASIC1.44□□□□□ -2.18
Col3a1P08121 Mir411-201ENSMUST00000083543 82 ntBASIC1.44□□□□□ -2.18
Col3a1P08121 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.44□□□□□ -2.18
Col3a1P08121 Gm26339-201ENSMUST00000102368 99 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Col3a1P08121 Gm22545-201ENSMUST00000104350 132 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Gm22999-201ENSMUST00000157082 88 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Gm24649-201ENSMUST00000157106 134 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Gm23986-201ENSMUST00000157144 63 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Gm22540-201ENSMUST00000158168 117 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Gm25161-201ENSMUST00000158913 132 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Mir6376-201ENSMUST00000185149 131 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Gm43977-201ENSMUST00000203970 189 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 Gm45268-201ENSMUST00000210046 370 ntBASIC1.43□□□□□ -2.18
Col3a1P08121 AC166341.8-201ENSMUST00000221267 108 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 162.4 ms