Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm23140-201ENSMUST00000082487 107 ntBASIC1.9□□□□□ -2.11
Vti1aO89116 Snord1a-201ENSMUST00000083160 74 ntBASIC1.9□□□□□ -2.11
Vti1aO89116 Gm23298-201ENSMUST00000083181 107 ntBASIC1.9□□□□□ -2.11
Vti1aO89116 Gm24614-201ENSMUST00000083269 107 ntBASIC1.9□□□□□ -2.11
Vti1aO89116 Gm22057-201ENSMUST00000083387 107 ntBASIC1.9□□□□□ -2.11
Vti1aO89116 Gm25516-201ENSMUST00000083857 107 ntBASIC1.9□□□□□ -2.11
Vti1aO89116 Gm22761-201ENSMUST00000102278 96 ntBASIC1.89□□□□□ -2.11
Vti1aO89116 Gm25832-201ENSMUST00000104140 130 ntBASIC1.89□□□□□ -2.11
Vti1aO89116 Gm25279-201ENSMUST00000122608 133 ntBASIC1.89□□□□□ -2.11
Vti1aO89116 Gm23838-201ENSMUST00000158067 162 ntBASIC1.89□□□□□ -2.11
Vti1aO89116 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Vti1aO89116 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.89□□□□□ -2.11
Vti1aO89116 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Vti1aO89116 Snord78-201ENSMUST00000104032 66 ntBASIC1.88□□□□□ -2.11
Vti1aO89116 Gm24984-201ENSMUST00000104454 133 ntBASIC1.88□□□□□ -2.11
Vti1aO89116 Gm24468-201ENSMUST00000104489 104 ntBASIC1.88□□□□□ -2.11
Vti1aO89116 Gm24509-201ENSMUST00000157086 101 ntBASIC1.88□□□□□ -2.11
Vti1aO89116 Gm25358-201ENSMUST00000157189 101 ntBASIC1.88□□□□□ -2.11
Vti1aO89116 Gm24677-201ENSMUST00000158755 150 ntBASIC1.88□□□□□ -2.11
Vti1aO89116 Gm23714-201ENSMUST00000179259 105 ntBASIC1.88□□□□□ -2.11
Vti1aO89116 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.88□□□□□ -2.11
Vti1aO89116 Gm24262-201ENSMUST00000157431 144 ntBASIC1.87□□□□□ -2.11
Vti1aO89116 Gm22914-201ENSMUST00000175195 77 ntBASIC1.87□□□□□ -2.11
Vti1aO89116 Gm22929-201ENSMUST00000175517 107 ntBASIC1.87□□□□□ -2.11
Vti1aO89116 Gm23419-201ENSMUST00000175523 84 ntBASIC1.87□□□□□ -2.11
Vti1aO89116 Mir6369-201ENSMUST00000183772 106 ntBASIC1.87□□□□□ -2.11
Vti1aO89116 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.87□□□□□ -2.11
Vti1aO89116 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Vti1aO89116 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Vti1aO89116 Mir653-201ENSMUST00000102402 85 ntBASIC1.86□□□□□ -2.11
Vti1aO89116 Gm23766-201ENSMUST00000103894 80 ntBASIC1.86□□□□□ -2.11
Vti1aO89116 Gm15654-201ENSMUST00000152660 300 ntBASIC1.86□□□□□ -2.11
Vti1aO89116 Gm16550-201ENSMUST00000162550 126 ntBASIC1.86□□□□□ -2.11
Vti1aO89116 Mir7241-201ENSMUST00000184532 64 ntBASIC1.86□□□□□ -2.11
Vti1aO89116 Gm42935-201ENSMUST00000202004 151 ntBASIC1.86□□□□□ -2.11
Vti1aO89116 Gm25650-201ENSMUST00000083784 162 ntBASIC1.86□□□□□ -2.11
Vti1aO89116 Snora2b-201ENSMUST00000084005 137 ntBASIC1.86□□□□□ -2.11
Vti1aO89116 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Vti1aO89116 Gm22004-201ENSMUST00000101884 107 ntBASIC1.85□□□□□ -2.11
Vti1aO89116 Gm26080-201ENSMUST00000104069 131 ntBASIC1.85□□□□□ -2.11
Vti1aO89116 n-R5s39-201ENSMUST00000122613 108 ntBASIC1.85□□□□□ -2.11
Vti1aO89116 Gm25544-201ENSMUST00000122676 120 ntBASIC1.85□□□□□ -2.11
Vti1aO89116 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.85□□□□□ -2.11
Vti1aO89116 Gm24649-201ENSMUST00000157106 134 ntBASIC1.85□□□□□ -2.11
Vti1aO89116 Gm16307-201ENSMUST00000161269 210 ntBASIC1.85□□□□□ -2.11
Vti1aO89116 Gm27365-201ENSMUST00000184041 177 ntBASIC1.85□□□□□ -2.11
Vti1aO89116 Gm28862-201ENSMUST00000188246 163 ntBASIC1.85□□□□□ -2.11
Vti1aO89116 Mir532-201ENSMUST00000093630 96 ntBASIC1.85□□□□□ -2.11
Vti1aO89116 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.84□□□□□ -2.11
Vti1aO89116 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Vti1aO89116 Gm25978-201ENSMUST00000158698 90 ntBASIC1.84□□□□□ -2.11
Vti1aO89116 Gm24877-201ENSMUST00000158779 116 ntBASIC1.84□□□□□ -2.11
Vti1aO89116 Gm25678-201ENSMUST00000174984 73 ntBASIC1.84□□□□□ -2.11
Vti1aO89116 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.84□□□□□ -2.11
Vti1aO89116 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.84□□□□□ -2.11
Vti1aO89116 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.83□□□□□ -2.12
Vti1aO89116 Gm25541-201ENSMUST00000116888 126 ntBASIC1.83□□□□□ -2.12
Vti1aO89116 Gm14923-201ENSMUST00000118270 155 ntBASIC1.83□□□□□ -2.12
Vti1aO89116 Gm26038-201ENSMUST00000158151 106 ntBASIC1.83□□□□□ -2.12
Vti1aO89116 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.83□□□□□ -2.12
Vti1aO89116 Mir148b-201ENSMUST00000083626 97 ntBASIC1.83□□□□□ -2.12
Vti1aO89116 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Vti1aO89116 Gm25663-201ENSMUST00000157698 135 ntBASIC1.82□□□□□ -2.12
Vti1aO89116 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.82□□□□□ -2.12
Vti1aO89116 Gm24494-201ENSMUST00000083804 81 ntBASIC1.82□□□□□ -2.12
Vti1aO89116 Gm26421-201ENSMUST00000104279 132 ntBASIC1.81□□□□□ -2.12
Vti1aO89116 Gm24947-201ENSMUST00000158334 110 ntBASIC1.81□□□□□ -2.12
Vti1aO89116 Gm23967-201ENSMUST00000175062 78 ntBASIC1.81□□□□□ -2.12
Vti1aO89116 Gm25069-201ENSMUST00000175238 86 ntBASIC1.81□□□□□ -2.12
Vti1aO89116 Gm24575-201ENSMUST00000175502 77 ntBASIC1.81□□□□□ -2.12
Vti1aO89116 Mir21c-201ENSMUST00000184910 78 ntBASIC1.81□□□□□ -2.12
Vti1aO89116 Mir30f-201ENSMUST00000196073 92 ntBASIC1.81□□□□□ -2.12
Vti1aO89116 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
Vti1aO89116 Gm22164-201ENSMUST00000158413 106 ntBASIC1.8□□□□□ -2.12
Vti1aO89116 Gm23384-201ENSMUST00000158593 103 ntBASIC1.8□□□□□ -2.12
Vti1aO89116 Gm25936-201ENSMUST00000179952 114 ntBASIC1.8□□□□□ -2.12
Vti1aO89116 Mir7-1-201ENSMUST00000083500 108 ntBASIC1.8□□□□□ -2.12
Vti1aO89116 Gm25068-201ENSMUST00000103895 110 ntBASIC1.79□□□□□ -2.12
Vti1aO89116 Gm22319-201ENSMUST00000157147 122 ntBASIC1.79□□□□□ -2.12
Vti1aO89116 Gm24902-201ENSMUST00000158126 123 ntBASIC1.79□□□□□ -2.12
Vti1aO89116 Mir8116-201ENSMUST00000184134 97 ntBASIC1.79□□□□□ -2.12
Vti1aO89116 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC1.79□□□□□ -2.12
Vti1aO89116 mt-Tv-201ENSMUST00000082389 69 ntBASIC1.79□□□□□ -2.12
Vti1aO89116 Gm14882-201ENSMUST00000117216 218 ntBASIC1.78□□□□□ -2.12
Vti1aO89116 Gm25887-201ENSMUST00000157777 84 ntBASIC1.78□□□□□ -2.12
Vti1aO89116 Gm22386-201ENSMUST00000158192 129 ntBASIC1.78□□□□□ -2.12
Vti1aO89116 Gm23351-201ENSMUST00000158427 125 ntBASIC1.78□□□□□ -2.12
Vti1aO89116 Gm25831-201ENSMUST00000158924 163 ntBASIC1.78□□□□□ -2.12
Vti1aO89116 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.78□□□□□ -2.12
Vti1aO89116 Mir450b-201ENSMUST00000102095 82 ntBASIC1.77□□□□□ -2.13
Vti1aO89116 Scarna9-201ENSMUST00000104318 70 ntBASIC1.77□□□□□ -2.13
Vti1aO89116 Gm14039-201ENSMUST00000118705 101 ntBASIC1.77□□□□□ -2.13
Vti1aO89116 Gm11248-201ENSMUST00000119568 201 ntBASIC1.77□□□□□ -2.13
Vti1aO89116 Gm24915-201ENSMUST00000157288 78 ntBASIC1.77□□□□□ -2.13
Vti1aO89116 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1.77□□□□□ -2.13
Vti1aO89116 AC160962.3-201ENSMUST00000225914 112 ntBASIC1.77□□□□□ -2.13
Vti1aO89116 Gm22809-201ENSMUST00000082743 156 ntBASIC1.77□□□□□ -2.13
Vti1aO89116 Gm24406-201ENSMUST00000083026 128 ntBASIC1.77□□□□□ -2.13
Vti1aO89116 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Vti1aO89116 Gm25759-201ENSMUST00000103988 129 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 144.9 ms