Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-1.05□□□□□ -2.58
Hmgb3O54879 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-1.05□□□□□ -2.58
Hmgb3O54879 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-1.05□□□□□ -2.58
Hmgb3O54879 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-1.05□□□□□ -2.58
Hmgb3O54879 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-1.05□□□□□ -2.58
Hmgb3O54879 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-1.05□□□□□ -2.58
Hmgb3O54879 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-1.05□□□□□ -2.58
Hmgb3O54879 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-1.05□□□□□ -2.58
Hmgb3O54879 Gm44419-201ENSMUST00000203338 229 ntBASIC-1.05□□□□□ -2.58
Hmgb3O54879 Gm22365-201ENSMUST00000093750 117 ntBASIC-1.05□□□□□ -2.58
Hmgb3O54879 Mir216b-201ENSMUST00000102363 86 ntBASIC-1.06□□□□□ -2.58
Hmgb3O54879 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-1.06□□□□□ -2.58
Hmgb3O54879 Gm24640-201ENSMUST00000116949 126 ntBASIC-1.06□□□□□ -2.58
Hmgb3O54879 Gm22626-201ENSMUST00000116990 126 ntBASIC-1.06□□□□□ -2.58
Hmgb3O54879 Gm25982-201ENSMUST00000157920 101 ntBASIC-1.06□□□□□ -2.58
Hmgb3O54879 Gm24393-201ENSMUST00000158135 97 ntBASIC-1.06□□□□□ -2.58
Hmgb3O54879 Gm24501-201ENSMUST00000158452 62 ntBASIC-1.06□□□□□ -2.58
Hmgb3O54879 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-1.06□□□□□ -2.58
Hmgb3O54879 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC-1.06□□□□□ -2.58
Hmgb3O54879 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-1.07□□□□□ -2.58
Hmgb3O54879 Snord100-201ENSMUST00000116836 74 ntBASIC-1.07□□□□□ -2.58
Hmgb3O54879 Gm27723-201ENSMUST00000157398 63 ntBASIC-1.07□□□□□ -2.58
Hmgb3O54879 Mir7657-201ENSMUST00000196051 57 ntBASIC-1.07□□□□□ -2.58
Hmgb3O54879 Gm45688-201ENSMUST00000210002 101 ntBASIC-1.07□□□□□ -2.58
Hmgb3O54879 Gm25588-201ENSMUST00000082501 140 ntBASIC-1.07□□□□□ -2.58
Hmgb3O54879 Gm24455-201ENSMUST00000083348 131 ntBASIC-1.07□□□□□ -2.58
Hmgb3O54879 Gm24238-201ENSMUST00000157792 98 ntBASIC-1.08□□□□□ -2.58
Hmgb3O54879 Gm24223-201ENSMUST00000158827 90 ntBASIC-1.08□□□□□ -2.58
Hmgb3O54879 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC-1.08□□□□□ -2.58
Hmgb3O54879 Mir6928-201ENSMUST00000185166 70 ntBASIC-1.08□□□□□ -2.58
Hmgb3O54879 AC125374.2-201ENSMUST00000214278 162 ntBASIC-1.08□□□□□ -2.58
Hmgb3O54879 Mir669i-201ENSMUST00000117007 127 ntBASIC-1.09□□□□□ -2.58
Hmgb3O54879 Gm23567-201ENSMUST00000178005 107 ntBASIC-1.09□□□□□ -2.58
Hmgb3O54879 n-R5s96-201ENSMUST00000082574 124 ntBASIC-1.09□□□□□ -2.58
Hmgb3O54879 Snord42a-201ENSMUST00000082606 65 ntBASIC-1.09□□□□□ -2.58
Hmgb3O54879 Gm14919-201ENSMUST00000120839 390 ntBASIC-1.1□□□□□ -2.59
Hmgb3O54879 Gm24593-201ENSMUST00000122507 106 ntBASIC-1.1□□□□□ -2.59
Hmgb3O54879 Gm29665-201ENSMUST00000191457 528 ntBASIC-1.1□□□□□ -2.59
Hmgb3O54879 Gm38295-201ENSMUST00000191951 151 ntBASIC-1.1□□□□□ -2.59
Hmgb3O54879 Gm43381-201ENSMUST00000198553 165 ntBASIC-1.1□□□□□ -2.59
Hmgb3O54879 Gm44149-201ENSMUST00000204256 226 ntBASIC-1.1□□□□□ -2.59
Hmgb3O54879 Gm26207-201ENSMUST00000082909 104 ntBASIC-1.1□□□□□ -2.59
Hmgb3O54879 Gm22790-201ENSMUST00000157229 129 ntBASIC-1.11□□□□□ -2.59
Hmgb3O54879 Gm25329-201ENSMUST00000158041 126 ntBASIC-1.11□□□□□ -2.59
Hmgb3O54879 Gm25364-201ENSMUST00000158851 107 ntBASIC-1.11□□□□□ -2.59
Hmgb3O54879 Gm27297-201ENSMUST00000183395 105 ntBASIC-1.11□□□□□ -2.59
Hmgb3O54879 Gm27610-201ENSMUST00000184026 74 ntBASIC-1.11□□□□□ -2.59
Hmgb3O54879 CT025603.4-201ENSMUST00000225777 413 ntBASIC-1.11□□□□□ -2.59
Hmgb3O54879 Gm24929-201ENSMUST00000083403 139 ntBASIC-1.11□□□□□ -2.59
Hmgb3O54879 Gm22557-201ENSMUST00000157804 102 ntBASIC-1.12□□□□□ -2.59
Hmgb3O54879 Mir378c-201ENSMUST00000184478 99 ntBASIC-1.12□□□□□ -2.59
Hmgb3O54879 Gm25024-201ENSMUST00000179667 104 ntBASIC-1.13□□□□□ -2.59
Hmgb3O54879 Gm23056-201ENSMUST00000082803 111 ntBASIC-1.13□□□□□ -2.59
Hmgb3O54879 Gm25793-201ENSMUST00000083287 107 ntBASIC-1.13□□□□□ -2.59
Hmgb3O54879 Gm25970-201ENSMUST00000157165 86 ntBASIC-1.14□□□□□ -2.59
Hmgb3O54879 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-1.14□□□□□ -2.59
Hmgb3O54879 Gm24316-201ENSMUST00000083041 107 ntBASIC-1.14□□□□□ -2.59
Hmgb3O54879 Mir96-201ENSMUST00000083652 106 ntBASIC-1.14□□□□□ -2.59
Hmgb3O54879 Mir489-201ENSMUST00000093599 107 ntBASIC-1.14□□□□□ -2.59
Hmgb3O54879 n-R5s8-201ENSMUST00000104121 118 ntBASIC-1.15□□□□□ -2.59
Hmgb3O54879 Gm23661-201ENSMUST00000122630 87 ntBASIC-1.15□□□□□ -2.59
Hmgb3O54879 Gm24392-201ENSMUST00000158136 103 ntBASIC-1.15□□□□□ -2.59
Hmgb3O54879 Gm24073-201ENSMUST00000158177 106 ntBASIC-1.15□□□□□ -2.59
Hmgb3O54879 Gm24667-201ENSMUST00000158938 103 ntBASIC-1.15□□□□□ -2.59
Hmgb3O54879 Gm26160-201ENSMUST00000158965 63 ntBASIC-1.15□□□□□ -2.59
Hmgb3O54879 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
Hmgb3O54879 Snord67-201ENSMUST00000104033 111 ntBASIC-1.16□□□□□ -2.6
Hmgb3O54879 Gm26421-201ENSMUST00000104279 132 ntBASIC-1.16□□□□□ -2.6
Hmgb3O54879 Gm22079-201ENSMUST00000157592 106 ntBASIC-1.16□□□□□ -2.6
Hmgb3O54879 Gm22788-201ENSMUST00000157876 61 ntBASIC-1.16□□□□□ -2.6
Hmgb3O54879 Gm24192-201ENSMUST00000157978 145 ntBASIC-1.16□□□□□ -2.6
Hmgb3O54879 Gm22234-201ENSMUST00000174906 65 ntBASIC-1.16□□□□□ -2.6
Hmgb3O54879 Gm43976-201ENSMUST00000203637 235 ntBASIC-1.16□□□□□ -2.6
Hmgb3O54879 Gm44687-201ENSMUST00000204975 235 ntBASIC-1.16□□□□□ -2.6
Hmgb3O54879 Gm22287-201ENSMUST00000083197 107 ntBASIC-1.16□□□□□ -2.6
Hmgb3O54879 Mir145b-201ENSMUST00000184434 75 ntBASIC-1.17□□□□□ -2.6
Hmgb3O54879 AC164117.2-201ENSMUST00000222090 327 ntBASIC-1.17□□□□□ -2.6
Hmgb3O54879 Gm24894-201ENSMUST00000122744 118 ntBASIC-1.18□□□□□ -2.6
Hmgb3O54879 Gm23253-201ENSMUST00000157441 104 ntBASIC-1.18□□□□□ -2.6
Hmgb3O54879 Gm44490-201ENSMUST00000198566 127 ntBASIC-1.18□□□□□ -2.6
Hmgb3O54879 Gm42935-201ENSMUST00000202004 151 ntBASIC-1.18□□□□□ -2.6
Hmgb3O54879 Gm23239-201ENSMUST00000083006 181 ntBASIC-1.18□□□□□ -2.6
Hmgb3O54879 Gm22784-201ENSMUST00000104088 132 ntBASIC-1.19□□□□□ -2.6
Hmgb3O54879 Gm23654-201ENSMUST00000116758 126 ntBASIC-1.19□□□□□ -2.6
Hmgb3O54879 Gm26287-201ENSMUST00000158887 81 ntBASIC-1.19□□□□□ -2.6
Hmgb3O54879 Gm25472-201ENSMUST00000175454 78 ntBASIC-1.19□□□□□ -2.6
Hmgb3O54879 Gm28008-201ENSMUST00000184021 186 ntBASIC-1.19□□□□□ -2.6
Hmgb3O54879 Mir5124b-201ENSMUST00000184251 85 ntBASIC-1.19□□□□□ -2.6
Hmgb3O54879 Gm24035-201ENSMUST00000082867 107 ntBASIC-1.19□□□□□ -2.6
Hmgb3O54879 Gm26497-201ENSMUST00000083146 107 ntBASIC-1.19□□□□□ -2.6
Hmgb3O54879 Gm25629-201ENSMUST00000084001 107 ntBASIC-1.19□□□□□ -2.6
Hmgb3O54879 Gm23012-201ENSMUST00000104149 83 ntBASIC-1.2□□□□□ -2.6
Hmgb3O54879 Gm12686-201ENSMUST00000120546 397 ntBASIC-1.2□□□□□ -2.6
Hmgb3O54879 Gm25664-201ENSMUST00000157697 107 ntBASIC-1.2□□□□□ -2.6
Hmgb3O54879 Gm23065-201ENSMUST00000158236 130 ntBASIC-1.2□□□□□ -2.6
Hmgb3O54879 Gm25267-201ENSMUST00000158522 63 ntBASIC-1.2□□□□□ -2.6
Hmgb3O54879 Mir7043-201ENSMUST00000184219 70 ntBASIC-1.2□□□□□ -2.6
Hmgb3O54879 Gm29512-201ENSMUST00000185544 315 ntBASIC-1.2□□□□□ -2.6
Hmgb3O54879 Mir3969-201ENSMUST00000197106 92 ntBASIC-1.2□□□□□ -2.6
Hmgb3O54879 Mir302d-201ENSMUST00000083513 66 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 76,532 protein–RNA pairs in 164.4 ms