Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm22630-201ENSMUST00000177781 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm23560-201ENSMUST00000177782 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm25462-201ENSMUST00000177833 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm26059-201ENSMUST00000177865 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm22255-201ENSMUST00000177933 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm25146-201ENSMUST00000177976 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm25523-201ENSMUST00000178044 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm24585-201ENSMUST00000178104 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm22627-201ENSMUST00000178127 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm22912-201ENSMUST00000178242 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm24866-201ENSMUST00000178338 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm22524-201ENSMUST00000178357 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm25710-201ENSMUST00000178367 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm23575-201ENSMUST00000178406 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm24872-201ENSMUST00000178434 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm22449-201ENSMUST00000178924 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm24702-201ENSMUST00000178965 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm24206-201ENSMUST00000179011 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm24528-201ENSMUST00000179164 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm22909-201ENSMUST00000179190 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm26334-201ENSMUST00000179403 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm25463-201ENSMUST00000179405 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm25742-201ENSMUST00000179530 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm25209-201ENSMUST00000179576 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm26392-201ENSMUST00000179661 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm25230-201ENSMUST00000179740 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm26434-201ENSMUST00000179778 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm25741-201ENSMUST00000179825 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm24759-201ENSMUST00000179827 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm24219-201ENSMUST00000179861 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm27420-201ENSMUST00000183823 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Mir7678-201ENSMUST00000185076 71 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Mir468-201ENSMUST00000197332 78 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm44396-201ENSMUST00000199843 114 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm42844-201ENSMUST00000200355 112 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 mt-Tf-201ENSMUST00000082387 68 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Snora41-201ENSMUST00000082668 132 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm23254-201ENSMUST00000097244 79 ntBASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1,6□□□□□ -2,15
Trim55G3X8Y1 Gm23654-201ENSMUST00000116758 126 ntBASIC1,59□□□□□ -2,15
Trim55G3X8Y1 Gm25978-201ENSMUST00000158698 90 ntBASIC1,59□□□□□ -2,15
Trim55G3X8Y1 Gm22070-201ENSMUST00000178475 107 ntBASIC1,59□□□□□ -2,15
Trim55G3X8Y1 Mir7679-201ENSMUST00000183379 63 ntBASIC1,59□□□□□ -2,15
Trim55G3X8Y1 Mir6369-201ENSMUST00000183772 106 ntBASIC1,59□□□□□ -2,15
Trim55G3X8Y1 Gm44481-201ENSMUST00000197288 84 ntBASIC1,59□□□□□ -2,15
Trim55G3X8Y1 Gm25820-201ENSMUST00000198589 127 ntBASIC1,59□□□□□ -2,15
Trim55G3X8Y1 Gm44339-201ENSMUST00000200598 84 ntBASIC1,59□□□□□ -2,15
Trim55G3X8Y1 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1,58□□□□□ -2,16
Trim55G3X8Y1 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1,58□□□□□ -2,16
Trim55G3X8Y1 Gm22003-201ENSMUST00000101885 107 ntBASIC1,58□□□□□ -2,16
Trim55G3X8Y1 Mir20b-201ENSMUST00000102087 80 ntBASIC1,58□□□□□ -2,16
Trim55G3X8Y1 Scarna9-201ENSMUST00000104318 70 ntBASIC1,58□□□□□ -2,16
Trim55G3X8Y1 Gm25680-201ENSMUST00000116917 126 ntBASIC1,58□□□□□ -2,16
Trim55G3X8Y1 Gm22635-201ENSMUST00000116962 126 ntBASIC1,58□□□□□ -2,16
Trim55G3X8Y1 Gm22556-201ENSMUST00000157803 100 ntBASIC1,58□□□□□ -2,16
Trim55G3X8Y1 Gm24076-201ENSMUST00000158179 94 ntBASIC1,58□□□□□ -2,16
Trim55G3X8Y1 Gm22756-201ENSMUST00000180118 107 ntBASIC1,58□□□□□ -2,16
Trim55G3X8Y1 Gm26054-201ENSMUST00000083037 107 ntBASIC1,58□□□□□ -2,16
Trim55G3X8Y1 Gm22055-201ENSMUST00000083388 107 ntBASIC1,58□□□□□ -2,16
Trim55G3X8Y1 Gm24492-201ENSMUST00000083798 107 ntBASIC1,58□□□□□ -2,16
Trim55G3X8Y1 Gm25684-201ENSMUST00000083941 107 ntBASIC1,58□□□□□ -2,16
Trim55G3X8Y1 Mir532-201ENSMUST00000093630 96 ntBASIC1,58□□□□□ -2,16
Trim55G3X8Y1 Gm14039-201ENSMUST00000118705 101 ntBASIC1,57□□□□□ -2,16
Trim55G3X8Y1 Gm23986-201ENSMUST00000157144 63 ntBASIC1,57□□□□□ -2,16
Trim55G3X8Y1 Scarna3b-201ENSMUST00000157533 139 ntBASIC1,57□□□□□ -2,16
Trim55G3X8Y1 Gm25889-201ENSMUST00000157775 107 ntBASIC1,57□□□□□ -2,16
Trim55G3X8Y1 Gm22551-201ENSMUST00000157795 103 ntBASIC1,57□□□□□ -2,16
Trim55G3X8Y1 Mir1961-201ENSMUST00000158643 112 ntBASIC1,57□□□□□ -2,16
Trim55G3X8Y1 Gm24174-201ENSMUST00000158933 111 ntBASIC1,57□□□□□ -2,16
Trim55G3X8Y1 Gm24638-201ENSMUST00000179807 132 ntBASIC1,57□□□□□ -2,16
Trim55G3X8Y1 Gm28270-201ENSMUST00000188550 109 ntBASIC1,57□□□□□ -2,16
Trim55G3X8Y1 Gm28328-201ENSMUST00000188869 109 ntBASIC1,57□□□□□ -2,16
Trim55G3X8Y1 Mir3087-201ENSMUST00000199405 56 ntBASIC1,57□□□□□ -2,16
Trim55G3X8Y1 CT025630.1-201ENSMUST00000227901 172 ntBASIC1,57□□□□□ -2,16
Trim55G3X8Y1 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1,56□□□□□ -2,16
Trim55G3X8Y1 Mir709-201ENSMUST00000102190 88 ntBASIC1,56□□□□□ -2,16
Trim55G3X8Y1 Mir301b-201ENSMUST00000102333 97 ntBASIC1,56□□□□□ -2,16
Trim55G3X8Y1 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1,56□□□□□ -2,16
Trim55G3X8Y1 Mir9-3-201ENSMUST00000175497 90 ntBASIC1,56□□□□□ -2,16
Trim55G3X8Y1 Gm22509-201ENSMUST00000082775 107 ntBASIC1,56□□□□□ -2,16
Trim55G3X8Y1 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1,55□□□□□ -2,16
Trim55G3X8Y1 Gm25759-201ENSMUST00000103988 129 ntBASIC1,55□□□□□ -2,16
Trim55G3X8Y1 Gm25279-201ENSMUST00000122608 133 ntBASIC1,55□□□□□ -2,16
Trim55G3X8Y1 Gm16399-201ENSMUST00000181423 219 ntBASIC1,55□□□□□ -2,16
Trim55G3X8Y1 Gm28767-201ENSMUST00000188601 114 ntBASIC1,55□□□□□ -2,16
Trim55G3X8Y1 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1,54□□□□□ -2,16
Trim55G3X8Y1 Gm22213-201ENSMUST00000157564 119 ntBASIC1,54□□□□□ -2,16
Trim55G3X8Y1 Gm26358-201ENSMUST00000158215 97 ntBASIC1,54□□□□□ -2,16
Trim55G3X8Y1 Gm22801-201ENSMUST00000175624 84 ntBASIC1,54□□□□□ -2,16
Trim55G3X8Y1 Gm26398-201ENSMUST00000179015 127 ntBASIC1,54□□□□□ -2,16
Retrieved 100 of 76,532 protein–RNA pairs in 144,5 ms