Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Gm23988-201ENSMUST00000117034 122 ntBASIC1.04□□□□□ -2.24
Rnf4Q9QZS2 Gm22790-201ENSMUST00000157229 129 ntBASIC1.04□□□□□ -2.24
Rnf4Q9QZS2 Mir6481-201ENSMUST00000184617 110 ntBASIC1.04□□□□□ -2.24
Rnf4Q9QZS2 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.04□□□□□ -2.24
Rnf4Q9QZS2 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.04□□□□□ -2.24
Rnf4Q9QZS2 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.04□□□□□ -2.24
Rnf4Q9QZS2 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Rnf4Q9QZS2 Mir547-201ENSMUST00000102051 78 ntBASIC1.03□□□□□ -2.24
Rnf4Q9QZS2 Gm23990-201ENSMUST00000117031 117 ntBASIC1.03□□□□□ -2.24
Rnf4Q9QZS2 Gm26412-201ENSMUST00000157666 55 ntBASIC1.03□□□□□ -2.24
Rnf4Q9QZS2 Gm22515-201ENSMUST00000158273 305 ntBASIC1.03□□□□□ -2.24
Rnf4Q9QZS2 Gm17528-201ENSMUST00000171026 239 ntBASIC1.03□□□□□ -2.24
Rnf4Q9QZS2 Mir466b-1-201ENSMUST00000177988 82 ntBASIC1.03□□□□□ -2.24
Rnf4Q9QZS2 Gm27699-201ENSMUST00000183553 180 ntBASIC1.03□□□□□ -2.24
Rnf4Q9QZS2 Mir468-201ENSMUST00000197332 78 ntBASIC1.03□□□□□ -2.24
Rnf4Q9QZS2 Gm25416-201ENSMUST00000104221 107 ntBASIC1.02□□□□□ -2.25
Rnf4Q9QZS2 Gm23130-201ENSMUST00000104252 74 ntBASIC1.02□□□□□ -2.25
Rnf4Q9QZS2 Gm24054-201ENSMUST00000158619 105 ntBASIC1.02□□□□□ -2.25
Rnf4Q9QZS2 Gm16307-201ENSMUST00000161269 210 ntBASIC1.02□□□□□ -2.25
Rnf4Q9QZS2 Gm44948-201ENSMUST00000209050 149 ntBASIC1.02□□□□□ -2.25
Rnf4Q9QZS2 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Rnf4Q9QZS2 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.02□□□□□ -2.25
Rnf4Q9QZS2 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.02□□□□□ -2.25
Rnf4Q9QZS2 Mir22-201ENSMUST00000083595 95 ntBASIC1.02□□□□□ -2.25
Rnf4Q9QZS2 Gm25683-201ENSMUST00000083940 131 ntBASIC1.02□□□□□ -2.25
Rnf4Q9QZS2 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.01□□□□□ -2.25
Rnf4Q9QZS2 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Rnf4Q9QZS2 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Rnf4Q9QZS2 Gm25506-201ENSMUST00000104339 70 ntBASIC1.01□□□□□ -2.25
Rnf4Q9QZS2 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Rnf4Q9QZS2 Gm22340-201ENSMUST00000157717 114 ntBASIC1.01□□□□□ -2.25
Rnf4Q9QZS2 Gm25599-201ENSMUST00000157816 103 ntBASIC1.01□□□□□ -2.25
Rnf4Q9QZS2 Gm22425-201ENSMUST00000158532 138 ntBASIC1.01□□□□□ -2.25
Rnf4Q9QZS2 Mir1961-201ENSMUST00000158643 112 ntBASIC1.01□□□□□ -2.25
Rnf4Q9QZS2 Gm25166-201ENSMUST00000158909 111 ntBASIC1.01□□□□□ -2.25
Rnf4Q9QZS2 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.01□□□□□ -2.25
Rnf4Q9QZS2 Gm8219-201ENSMUST00000218309 242 ntBASIC1.01□□□□□ -2.25
Rnf4Q9QZS2 Gm22576-201ENSMUST00000083733 104 ntBASIC1.01□□□□□ -2.25
Rnf4Q9QZS2 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1□□□□□ -2.25
Rnf4Q9QZS2 Mir709-201ENSMUST00000102190 88 ntBASIC1□□□□□ -2.25
Rnf4Q9QZS2 Gm24250-201ENSMUST00000157320 135 ntBASIC1□□□□□ -2.25
Rnf4Q9QZS2 Gm24401-201ENSMUST00000157868 91 ntBASIC1□□□□□ -2.25
Rnf4Q9QZS2 Gm23770-201ENSMUST00000178009 108 ntBASIC1□□□□□ -2.25
Rnf4Q9QZS2 Gm22832-201ENSMUST00000178022 108 ntBASIC1□□□□□ -2.25
Rnf4Q9QZS2 Gm23863-201ENSMUST00000178265 108 ntBASIC1□□□□□ -2.25
Rnf4Q9QZS2 Gm24828-201ENSMUST00000178507 108 ntBASIC1□□□□□ -2.25
Rnf4Q9QZS2 Gm23052-201ENSMUST00000178633 108 ntBASIC1□□□□□ -2.25
Rnf4Q9QZS2 Gm25729-201ENSMUST00000179050 108 ntBASIC1□□□□□ -2.25
Rnf4Q9QZS2 Gm25359-201ENSMUST00000179315 108 ntBASIC1□□□□□ -2.25
Rnf4Q9QZS2 Gm22624-201ENSMUST00000179913 108 ntBASIC1□□□□□ -2.25
Rnf4Q9QZS2 Gm20118-201ENSMUST00000187207 162 ntBASIC1□□□□□ -2.25
Rnf4Q9QZS2 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC1□□□□□ -2.25
Rnf4Q9QZS2 AC150901.1-201ENSMUST00000208407 145 ntBASIC1□□□□□ -2.25
Rnf4Q9QZS2 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1□□□□□ -2.25
Rnf4Q9QZS2 AC164561.1-201ENSMUST00000220414 115 ntBASIC1□□□□□ -2.25
Rnf4Q9QZS2 Snora41-201ENSMUST00000082668 132 ntBASIC1□□□□□ -2.25
Rnf4Q9QZS2 Gm25136-201ENSMUST00000083253 115 ntBASIC1□□□□□ -2.25
Rnf4Q9QZS2 Gm25611-201ENSMUST00000104017 133 ntBASIC0.99□□□□□ -2.25
Rnf4Q9QZS2 Mir1966-201ENSMUST00000158807 108 ntBASIC0.99□□□□□ -2.25
Rnf4Q9QZS2 Gm22699-201ENSMUST00000175376 105 ntBASIC0.99□□□□□ -2.25
Rnf4Q9QZS2 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.99□□□□□ -2.25
Rnf4Q9QZS2 Gm24311-201ENSMUST00000082570 104 ntBASIC0.99□□□□□ -2.25
Rnf4Q9QZS2 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Rnf4Q9QZS2 Gm26421-201ENSMUST00000104279 132 ntBASIC0.98□□□□□ -2.25
Rnf4Q9QZS2 Gm26018-201ENSMUST00000104406 128 ntBASIC0.98□□□□□ -2.25
Rnf4Q9QZS2 Gm22967-201ENSMUST00000157956 239 ntBASIC0.98□□□□□ -2.25
Rnf4Q9QZS2 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.98□□□□□ -2.25
Rnf4Q9QZS2 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.98□□□□□ -2.25
Rnf4Q9QZS2 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
Rnf4Q9QZS2 Gm24579-201ENSMUST00000103964 144 ntBASIC0.97□□□□□ -2.25
Rnf4Q9QZS2 Gm22079-201ENSMUST00000157592 106 ntBASIC0.97□□□□□ -2.25
Rnf4Q9QZS2 Gm22842-201ENSMUST00000157709 118 ntBASIC0.97□□□□□ -2.25
Rnf4Q9QZS2 Gm43898-201ENSMUST00000204456 424 ntBASIC0.97□□□□□ -2.25
Rnf4Q9QZS2 Gm8508-201ENSMUST00000061226 363 ntBASIC0.97□□□□□ -2.25
Rnf4Q9QZS2 Gm25081-201ENSMUST00000082534 108 ntBASIC0.97□□□□□ -2.25
Rnf4Q9QZS2 Gm25060-201ENSMUST00000157374 130 ntBASIC0.96□□□□□ -2.26
Rnf4Q9QZS2 Gm25716-201ENSMUST00000158628 104 ntBASIC0.96□□□□□ -2.26
Rnf4Q9QZS2 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.96□□□□□ -2.26
Rnf4Q9QZS2 Gm24106-201ENSMUST00000175498 127 ntBASIC0.96□□□□□ -2.26
Rnf4Q9QZS2 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
Rnf4Q9QZS2 Gm18665-201ENSMUST00000189783 270 ntBASIC0.96□□□□□ -2.26
Rnf4Q9QZS2 Gm42533-201ENSMUST00000196247 157 ntBASIC0.96□□□□□ -2.26
Rnf4Q9QZS2 Gm18213-201ENSMUST00000207850 178 ntBASIC0.96□□□□□ -2.26
Rnf4Q9QZS2 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.96□□□□□ -2.26
Rnf4Q9QZS2 Mir411-201ENSMUST00000083543 82 ntBASIC0.96□□□□□ -2.26
Rnf4Q9QZS2 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.96□□□□□ -2.26
Rnf4Q9QZS2 Gm24431-201ENSMUST00000104073 66 ntBASIC0.95□□□□□ -2.26
Rnf4Q9QZS2 Gm14502-201ENSMUST00000118154 113 ntBASIC0.95□□□□□ -2.26
Rnf4Q9QZS2 Gm24238-201ENSMUST00000157792 98 ntBASIC0.95□□□□□ -2.26
Rnf4Q9QZS2 Gm23893-201ENSMUST00000158106 134 ntBASIC0.95□□□□□ -2.26
Rnf4Q9QZS2 Gm25901-201ENSMUST00000158494 130 ntBASIC0.95□□□□□ -2.26
Rnf4Q9QZS2 Gm16550-201ENSMUST00000162550 126 ntBASIC0.95□□□□□ -2.26
Rnf4Q9QZS2 Gm24020-201ENSMUST00000180156 108 ntBASIC0.95□□□□□ -2.26
Rnf4Q9QZS2 Mir6377-201ENSMUST00000183760 114 ntBASIC0.95□□□□□ -2.26
Rnf4Q9QZS2 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
Rnf4Q9QZS2 Gm44322-201ENSMUST00000196830 115 ntBASIC0.95□□□□□ -2.26
Rnf4Q9QZS2 Gm44338-201ENSMUST00000198614 110 ntBASIC0.95□□□□□ -2.26
Rnf4Q9QZS2 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.94□□□□□ -2.26
Rnf4Q9QZS2 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Rnf4Q9QZS2 Mir297a-2-201ENSMUST00000103795 90 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 141 ms