Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Gm26107-201ENSMUST00000083972 107 ntBASIC-1.33□□□□□ -2.62
Six6Q9QZ28 Gm22105-201ENSMUST00000116734 116 ntBASIC-1.34□□□□□ -2.62
Six6Q9QZ28 Gm23715-201ENSMUST00000157354 106 ntBASIC-1.34□□□□□ -2.62
Six6Q9QZ28 Gm25909-201ENSMUST00000157619 121 ntBASIC-1.34□□□□□ -2.62
Six6Q9QZ28 Gm26054-201ENSMUST00000083037 107 ntBASIC-1.34□□□□□ -2.62
Six6Q9QZ28 Gm24453-201ENSMUST00000083346 76 ntBASIC-1.34□□□□□ -2.62
Six6Q9QZ28 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-1.34□□□□□ -2.62
Six6Q9QZ28 Gm26329-201ENSMUST00000093723 110 ntBASIC-1.34□□□□□ -2.62
Six6Q9QZ28 Mir20b-201ENSMUST00000102087 80 ntBASIC-1.35□□□□□ -2.63
Six6Q9QZ28 Mir216b-201ENSMUST00000102363 86 ntBASIC-1.35□□□□□ -2.63
Six6Q9QZ28 Mir759-201ENSMUST00000103254 98 ntBASIC-1.35□□□□□ -2.63
Six6Q9QZ28 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-1.35□□□□□ -2.63
Six6Q9QZ28 Gm25828-201ENSMUST00000157087 95 ntBASIC-1.35□□□□□ -2.63
Six6Q9QZ28 Gm24073-201ENSMUST00000158177 106 ntBASIC-1.35□□□□□ -2.63
Six6Q9QZ28 Zfp950-206ENSMUST00000178819 171 ntBASIC-1.35□□□□□ -2.63
Six6Q9QZ28 Gm28648-201ENSMUST00000190092 343 ntBASIC-1.35□□□□□ -2.63
Six6Q9QZ28 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.35□□□□□ -2.63
Six6Q9QZ28 Gm44392-201ENSMUST00000196758 115 ntBASIC-1.35□□□□□ -2.63
Six6Q9QZ28 AC132437.1-201ENSMUST00000218308 320 ntBASIC-1.35□□□□□ -2.63
Six6Q9QZ28 Snord42b-201ENSMUST00000083742 69 ntBASIC-1.35□□□□□ -2.63
Six6Q9QZ28 Gm12584-201ENSMUST00000117109 1105 ntBASIC-1.36□□□□□ -2.63
Six6Q9QZ28 Gm22097-201ENSMUST00000157929 278 ntBASIC-1.36□□□□□ -2.63
Six6Q9QZ28 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC-1.36□□□□□ -2.63
Six6Q9QZ28 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC-1.36□□□□□ -2.63
Six6Q9QZ28 Gm38268-201ENSMUST00000195813 193 ntBASIC-1.36□□□□□ -2.63
Six6Q9QZ28 Gm5002-201ENSMUST00000207145 223 ntBASIC-1.36□□□□□ -2.63
Six6Q9QZ28 Gm26131-201ENSMUST00000082725 110 ntBASIC-1.36□□□□□ -2.63
Six6Q9QZ28 Gm24037-201ENSMUST00000082871 180 ntBASIC-1.36□□□□□ -2.63
Six6Q9QZ28 Gm26202-201ENSMUST00000082910 65 ntBASIC-1.36□□□□□ -2.63
Six6Q9QZ28 Gm14626-201ENSMUST00000117619 216 ntBASIC-1.37□□□□□ -2.63
Six6Q9QZ28 Gm23111-201ENSMUST00000122652 105 ntBASIC-1.37□□□□□ -2.63
Six6Q9QZ28 Gm26133-201ENSMUST00000157363 100 ntBASIC-1.37□□□□□ -2.63
Six6Q9QZ28 Gm23145-201ENSMUST00000178912 79 ntBASIC-1.37□□□□□ -2.63
Six6Q9QZ28 Gm25450-201ENSMUST00000179144 107 ntBASIC-1.37□□□□□ -2.63
Six6Q9QZ28 Trav5-2-201ENSMUST00000199855 280 ntBASIC-1.37□□□□□ -2.63
Six6Q9QZ28 AC116589.4-201ENSMUST00000222390 216 ntBASIC-1.37□□□□□ -2.63
Six6Q9QZ28 AC164297.5-201ENSMUST00000224365 198 ntBASIC-1.37□□□□□ -2.63
Six6Q9QZ28 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.37□□□□□ -2.63
Six6Q9QZ28 Gm25586-201ENSMUST00000082499 112 ntBASIC-1.37□□□□□ -2.63
Six6Q9QZ28 Gm14301-201ENSMUST00000120181 324 ntBASIC-1.38□□□□□ -2.63
Six6Q9QZ28 Gm29140-201ENSMUST00000190187 476 ntBASIC-1.38□□□□□ -2.63
Six6Q9QZ28 Gm44811-201ENSMUST00000209120 228 ntBASIC-1.38□□□□□ -2.63
Six6Q9QZ28 Gm26495-201ENSMUST00000083152 137 ntBASIC-1.38□□□□□ -2.63
Six6Q9QZ28 Gm23012-201ENSMUST00000104149 83 ntBASIC-1.39□□□□□ -2.63
Six6Q9QZ28 Gm22319-201ENSMUST00000157147 122 ntBASIC-1.39□□□□□ -2.63
Six6Q9QZ28 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.39□□□□□ -2.63
Six6Q9QZ28 Gm26180-201ENSMUST00000179942 107 ntBASIC-1.39□□□□□ -2.63
Six6Q9QZ28 Snora19-201ENSMUST00000082962 132 ntBASIC-1.39□□□□□ -2.63
Six6Q9QZ28 Gm23658-201ENSMUST00000083233 132 ntBASIC-1.39□□□□□ -2.63
Six6Q9QZ28 Gm24614-201ENSMUST00000083269 107 ntBASIC-1.39□□□□□ -2.63
Six6Q9QZ28 Gm24640-201ENSMUST00000116949 126 ntBASIC-1.4□□□□□ -2.63
Six6Q9QZ28 Gm22626-201ENSMUST00000116990 126 ntBASIC-1.4□□□□□ -2.63
Six6Q9QZ28 Gm11834-201ENSMUST00000122257 585 ntBASIC-1.4□□□□□ -2.63
Six6Q9QZ28 Gm23655-201ENSMUST00000122627 105 ntBASIC-1.4□□□□□ -2.63
Six6Q9QZ28 Gm23072-201ENSMUST00000158243 123 ntBASIC-1.4□□□□□ -2.63
Six6Q9QZ28 AC121844.1-201ENSMUST00000218706 137 ntBASIC-1.4□□□□□ -2.63
Six6Q9QZ28 Gm24275-201ENSMUST00000116780 146 ntBASIC-1.41□□□□□ -2.64
Six6Q9QZ28 Gm22542-201ENSMUST00000158166 95 ntBASIC-1.41□□□□□ -2.64
Six6Q9QZ28 Gm45402-201ENSMUST00000211796 223 ntBASIC-1.41□□□□□ -2.64
Six6Q9QZ28 Gm25588-201ENSMUST00000082501 140 ntBASIC-1.41□□□□□ -2.64
Six6Q9QZ28 Gm24764-201ENSMUST00000083686 199 ntBASIC-1.41□□□□□ -2.64
Six6Q9QZ28 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC-1.42□□□□□ -2.64
Six6Q9QZ28 Gm14001-201ENSMUST00000118847 247 ntBASIC-1.42□□□□□ -2.64
Six6Q9QZ28 Gm14574-201ENSMUST00000120644 279 ntBASIC-1.42□□□□□ -2.64
Six6Q9QZ28 Gm13345-201ENSMUST00000121928 228 ntBASIC-1.42□□□□□ -2.64
Six6Q9QZ28 Gm23660-201ENSMUST00000178362 79 ntBASIC-1.42□□□□□ -2.64
Six6Q9QZ28 Gm24088-201ENSMUST00000179100 79 ntBASIC-1.42□□□□□ -2.64
Six6Q9QZ28 Gm7240-201ENSMUST00000220769 664 ntBASIC-1.42□□□□□ -2.64
Six6Q9QZ28 Gm14766-201ENSMUST00000121689 367 ntBASIC-1.43□□□□□ -2.64
Six6Q9QZ28 Gm26255-201ENSMUST00000122492 103 ntBASIC-1.43□□□□□ -2.64
Six6Q9QZ28 Gm22433-201ENSMUST00000158550 142 ntBASIC-1.43□□□□□ -2.64
Six6Q9QZ28 Gm24223-201ENSMUST00000158827 90 ntBASIC-1.43□□□□□ -2.64
Six6Q9QZ28 Gm23474-201ENSMUST00000158884 75 ntBASIC-1.43□□□□□ -2.64
Six6Q9QZ28 Gm25314-201ENSMUST00000178810 79 ntBASIC-1.43□□□□□ -2.64
Six6Q9QZ28 Mir677-202ENSMUST00000197076 78 ntBASIC-1.43□□□□□ -2.64
Six6Q9QZ28 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.43□□□□□ -2.64
Six6Q9QZ28 AC102369.1-201ENSMUST00000218415 373 ntBASIC-1.43□□□□□ -2.64
Six6Q9QZ28 Gm25579-201ENSMUST00000083407 106 ntBASIC-1.43□□□□□ -2.64
Six6Q9QZ28 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-1.44□□□□□ -2.64
Six6Q9QZ28 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-1.44□□□□□ -2.64
Six6Q9QZ28 Gm22788-201ENSMUST00000157876 61 ntBASIC-1.44□□□□□ -2.64
Six6Q9QZ28 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC-1.44□□□□□ -2.64
Six6Q9QZ28 Mir6961-201ENSMUST00000183874 67 ntBASIC-1.44□□□□□ -2.64
Six6Q9QZ28 Gm44959-201ENSMUST00000209127 231 ntBASIC-1.44□□□□□ -2.64
Six6Q9QZ28 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-1.44□□□□□ -2.64
Six6Q9QZ28 CT030166.3-201ENSMUST00000223203 193 ntBASIC-1.44□□□□□ -2.64
Six6Q9QZ28 Gm29344-201ENSMUST00000068143 210 ntBASIC-1.44□□□□□ -2.64
Six6Q9QZ28 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-1.44□□□□□ -2.64
Six6Q9QZ28 Gm23448-201ENSMUST00000083151 104 ntBASIC-1.44□□□□□ -2.64
Six6Q9QZ28 Mir302d-201ENSMUST00000083513 66 ntBASIC-1.44□□□□□ -2.64
Six6Q9QZ28 Mir496a-201ENSMUST00000093627 79 ntBASIC-1.44□□□□□ -2.64
Six6Q9QZ28 Gm24704-201ENSMUST00000093715 107 ntBASIC-1.44□□□□□ -2.64
Six6Q9QZ28 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
Six6Q9QZ28 Gm23654-201ENSMUST00000116758 126 ntBASIC-1.45□□□□□ -2.64
Six6Q9QZ28 Gm25848-201ENSMUST00000116790 144 ntBASIC-1.45□□□□□ -2.64
Six6Q9QZ28 Gm25366-201ENSMUST00000158845 124 ntBASIC-1.45□□□□□ -2.64
Six6Q9QZ28 Gm24108-201ENSMUST00000175495 77 ntBASIC-1.45□□□□□ -2.64
Six6Q9QZ28 Gm27297-201ENSMUST00000183395 105 ntBASIC-1.45□□□□□ -2.64
Six6Q9QZ28 Gm25248-201ENSMUST00000175473 98 ntBASIC-1.46□□□□□ -2.64
Six6Q9QZ28 Gm27672-201ENSMUST00000183751 204 ntBASIC-1.46□□□□□ -2.64
Retrieved 100 of 76,532 protein–RNA pairs in 228.6 ms