Protein–RNA interactions for Protein: Q9QY53

Nphp1, Nephrocystin-1, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp1Q9QY53 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Nphp1Q9QY53 Gm22790-201ENSMUST00000157229 129 ntBASIC0.31□□□□□ -2.36
Nphp1Q9QY53 Gm24250-201ENSMUST00000157320 135 ntBASIC0.31□□□□□ -2.36
Nphp1Q9QY53 Gm22850-201ENSMUST00000157714 82 ntBASIC0.31□□□□□ -2.36
Nphp1Q9QY53 Gm22706-201ENSMUST00000157907 112 ntBASIC0.31□□□□□ -2.36
Nphp1Q9QY53 Gm23770-201ENSMUST00000178009 108 ntBASIC0.31□□□□□ -2.36
Nphp1Q9QY53 Gm22832-201ENSMUST00000178022 108 ntBASIC0.31□□□□□ -2.36
Nphp1Q9QY53 Gm23863-201ENSMUST00000178265 108 ntBASIC0.31□□□□□ -2.36
Nphp1Q9QY53 Gm24828-201ENSMUST00000178507 108 ntBASIC0.31□□□□□ -2.36
Nphp1Q9QY53 Gm23052-201ENSMUST00000178633 108 ntBASIC0.31□□□□□ -2.36
Nphp1Q9QY53 Gm25729-201ENSMUST00000179050 108 ntBASIC0.31□□□□□ -2.36
Nphp1Q9QY53 Gm25359-201ENSMUST00000179315 108 ntBASIC0.31□□□□□ -2.36
Nphp1Q9QY53 Gm22624-201ENSMUST00000179913 108 ntBASIC0.31□□□□□ -2.36
Nphp1Q9QY53 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.31□□□□□ -2.36
Nphp1Q9QY53 Mir411-201ENSMUST00000083543 82 ntBASIC0.31□□□□□ -2.36
Nphp1Q9QY53 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.3□□□□□ -2.36
Nphp1Q9QY53 Gm25416-201ENSMUST00000104221 107 ntBASIC0.3□□□□□ -2.36
Nphp1Q9QY53 Gm22433-201ENSMUST00000158550 142 ntBASIC0.3□□□□□ -2.36
Nphp1Q9QY53 Gm24225-201ENSMUST00000158825 98 ntBASIC0.3□□□□□ -2.36
Nphp1Q9QY53 Gm16550-201ENSMUST00000162550 126 ntBASIC0.3□□□□□ -2.36
Nphp1Q9QY53 Mir200a-201ENSMUST00000083466 90 ntBASIC0.3□□□□□ -2.36
Nphp1Q9QY53 Gm26116-201ENSMUST00000175600 77 ntBASIC0.29□□□□□ -2.36
Nphp1Q9QY53 Snora15-201ENSMUST00000177461 131 ntBASIC0.29□□□□□ -2.36
Nphp1Q9QY53 Gm24488-201ENSMUST00000179934 127 ntBASIC0.29□□□□□ -2.36
Nphp1Q9QY53 Gm25701-201ENSMUST00000179988 127 ntBASIC0.29□□□□□ -2.36
Nphp1Q9QY53 Gm26431-201ENSMUST00000180199 127 ntBASIC0.29□□□□□ -2.36
Nphp1Q9QY53 Gm27993-201ENSMUST00000184362 85 ntBASIC0.29□□□□□ -2.36
Nphp1Q9QY53 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.29□□□□□ -2.36
Nphp1Q9QY53 Gm22738-201ENSMUST00000083440 147 ntBASIC0.29□□□□□ -2.36
Nphp1Q9QY53 Gm10172-201ENSMUST00000085929 558 ntBASIC0.29□□□□□ -2.36
Nphp1Q9QY53 Gm24276-201ENSMUST00000102181 110 ntBASIC0.28□□□□□ -2.36
Nphp1Q9QY53 Gm22149-201ENSMUST00000104442 136 ntBASIC0.28□□□□□ -2.36
Nphp1Q9QY53 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
Nphp1Q9QY53 Gm27475-201ENSMUST00000183420 61 ntBASIC0.28□□□□□ -2.36
Nphp1Q9QY53 Gm27717-201ENSMUST00000183933 151 ntBASIC0.28□□□□□ -2.36
Nphp1Q9QY53 Mir7065-201ENSMUST00000185110 61 ntBASIC0.28□□□□□ -2.36
Nphp1Q9QY53 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.28□□□□□ -2.36
Nphp1Q9QY53 Gm23301-201ENSMUST00000082713 65 ntBASIC0.28□□□□□ -2.36
Nphp1Q9QY53 Gm23378-201ENSMUST00000082942 107 ntBASIC0.28□□□□□ -2.36
Nphp1Q9QY53 Gm24030-201ENSMUST00000083931 164 ntBASIC0.28□□□□□ -2.36
Nphp1Q9QY53 Mir6369-201ENSMUST00000183772 106 ntBASIC0.27□□□□□ -2.37
Nphp1Q9QY53 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.26□□□□□ -2.37
Nphp1Q9QY53 Mir466p-201ENSMUST00000103925 89 ntBASIC0.26□□□□□ -2.37
Nphp1Q9QY53 Gm23545-201ENSMUST00000158205 104 ntBASIC0.26□□□□□ -2.37
Nphp1Q9QY53 Mir100-201ENSMUST00000175270 80 ntBASIC0.26□□□□□ -2.37
Nphp1Q9QY53 Gm42795-201ENSMUST00000198847 76 ntBASIC0.26□□□□□ -2.37
Nphp1Q9QY53 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Nphp1Q9QY53 Snord60-201ENSMUST00000082834 78 ntBASIC0.26□□□□□ -2.37
Nphp1Q9QY53 Mir669l-201ENSMUST00000103771 98 ntBASIC0.25□□□□□ -2.37
Nphp1Q9QY53 Mir1899-201ENSMUST00000122798 96 ntBASIC0.25□□□□□ -2.37
Nphp1Q9QY53 Gm22239-201ENSMUST00000175220 103 ntBASIC0.25□□□□□ -2.37
Nphp1Q9QY53 Mir7039-201ENSMUST00000183852 85 ntBASIC0.25□□□□□ -2.37
Nphp1Q9QY53 Mir8116-201ENSMUST00000184134 97 ntBASIC0.25□□□□□ -2.37
Nphp1Q9QY53 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.25□□□□□ -2.37
Nphp1Q9QY53 AC122320.1-201ENSMUST00000227233 105 ntBASIC0.25□□□□□ -2.37
Nphp1Q9QY53 Gm22431-201ENSMUST00000158545 107 ntBASIC0.24□□□□□ -2.37
Nphp1Q9QY53 Gm26360-201ENSMUST00000158872 103 ntBASIC0.24□□□□□ -2.37
Nphp1Q9QY53 AC154245.1-201ENSMUST00000224615 601 ntBASIC0.24□□□□□ -2.37
Nphp1Q9QY53 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.24□□□□□ -2.37
Nphp1Q9QY53 Mir224-201ENSMUST00000083608 82 ntBASIC0.24□□□□□ -2.37
Nphp1Q9QY53 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Nphp1Q9QY53 Gm23126-201ENSMUST00000104260 134 ntBASIC0.23□□□□□ -2.37
Nphp1Q9QY53 Gm16186-201ENSMUST00000120132 216 ntBASIC0.23□□□□□ -2.37
Nphp1Q9QY53 Gm24238-201ENSMUST00000157792 98 ntBASIC0.23□□□□□ -2.37
Nphp1Q9QY53 Gm10548-202ENSMUST00000165672 272 ntBASIC0.23□□□□□ -2.37
Nphp1Q9QY53 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
Nphp1Q9QY53 Mir377-201ENSMUST00000083504 68 ntBASIC0.23□□□□□ -2.37
Nphp1Q9QY53 Mir710-201ENSMUST00000102088 110 ntBASIC0.22□□□□□ -2.37
Nphp1Q9QY53 Gm23881-201ENSMUST00000116872 66 ntBASIC0.22□□□□□ -2.37
Nphp1Q9QY53 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.22□□□□□ -2.37
Nphp1Q9QY53 Gm22332-201ENSMUST00000158072 126 ntBASIC0.22□□□□□ -2.37
Nphp1Q9QY53 Scarna8-201ENSMUST00000158333 131 ntBASIC0.22□□□□□ -2.37
Nphp1Q9QY53 Mir6928-201ENSMUST00000185166 70 ntBASIC0.22□□□□□ -2.37
Nphp1Q9QY53 Gm44457-201ENSMUST00000198109 76 ntBASIC0.22□□□□□ -2.37
Nphp1Q9QY53 Gm44807-201ENSMUST00000206115 154 ntBASIC0.22□□□□□ -2.37
Nphp1Q9QY53 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Nphp1Q9QY53 Mir670-201ENSMUST00000102380 100 ntBASIC0.21□□□□□ -2.38
Nphp1Q9QY53 Scarna9-201ENSMUST00000104318 70 ntBASIC0.21□□□□□ -2.38
Nphp1Q9QY53 Gm15654-201ENSMUST00000152660 300 ntBASIC0.21□□□□□ -2.38
Nphp1Q9QY53 Gm22520-201ENSMUST00000158269 129 ntBASIC0.21□□□□□ -2.38
Nphp1Q9QY53 Gm25654-201ENSMUST00000158467 88 ntBASIC0.21□□□□□ -2.38
Nphp1Q9QY53 Gm23917-201ENSMUST00000175256 98 ntBASIC0.21□□□□□ -2.38
Nphp1Q9QY53 Mir6365-201ENSMUST00000183990 101 ntBASIC0.21□□□□□ -2.38
Nphp1Q9QY53 Gm44909-201ENSMUST00000208756 165 ntBASIC0.21□□□□□ -2.38
Nphp1Q9QY53 Mir201-201ENSMUST00000083470 66 ntBASIC0.21□□□□□ -2.38
Nphp1Q9QY53 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.2□□□□□ -2.38
Nphp1Q9QY53 Gm14626-201ENSMUST00000117619 216 ntBASIC0.2□□□□□ -2.38
Nphp1Q9QY53 Gm22612-201ENSMUST00000158293 101 ntBASIC0.2□□□□□ -2.38
Nphp1Q9QY53 Gm23141-201ENSMUST00000178682 94 ntBASIC0.2□□□□□ -2.38
Nphp1Q9QY53 Gm27943-201ENSMUST00000184844 116 ntBASIC0.2□□□□□ -2.38
Nphp1Q9QY53 Gm37586-201ENSMUST00000193654 204 ntBASIC0.2□□□□□ -2.38
Nphp1Q9QY53 Gm37116-201ENSMUST00000195161 147 ntBASIC0.2□□□□□ -2.38
Nphp1Q9QY53 Trav5-2-201ENSMUST00000199855 280 ntBASIC0.2□□□□□ -2.38
Nphp1Q9QY53 Gm24833-201ENSMUST00000116775 120 ntBASIC0.19□□□□□ -2.38
Nphp1Q9QY53 Gm26158-201ENSMUST00000158973 119 ntBASIC0.19□□□□□ -2.38
Nphp1Q9QY53 Mir30f-201ENSMUST00000196073 92 ntBASIC0.19□□□□□ -2.38
Nphp1Q9QY53 Mir721-201ENSMUST00000200230 88 ntBASIC0.19□□□□□ -2.38
Nphp1Q9QY53 Mir200b-201ENSMUST00000083615 70 ntBASIC0.19□□□□□ -2.38
Nphp1Q9QY53 Gm25610-201ENSMUST00000104016 129 ntBASIC0.18□□□□□ -2.38
Nphp1Q9QY53 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms