Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Rny3-201ENSMUST00000083011 102 ntBASIC-0.87□□□□□ -2.55
Trem3Q9JKE1 Mir363-201ENSMUST00000093598 75 ntBASIC-0.87□□□□□ -2.55
Trem3Q9JKE1 Gm25875-201ENSMUST00000104323 107 ntBASIC-0.88□□□□□ -2.55
Trem3Q9JKE1 Gm23708-201ENSMUST00000104367 123 ntBASIC-0.88□□□□□ -2.55
Trem3Q9JKE1 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-0.88□□□□□ -2.55
Trem3Q9JKE1 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.88□□□□□ -2.55
Trem3Q9JKE1 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.88□□□□□ -2.55
Trem3Q9JKE1 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.88□□□□□ -2.55
Trem3Q9JKE1 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-0.88□□□□□ -2.55
Trem3Q9JKE1 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.88□□□□□ -2.55
Trem3Q9JKE1 Gm24150-201ENSMUST00000082759 104 ntBASIC-0.88□□□□□ -2.55
Trem3Q9JKE1 Gm24445-201ENSMUST00000083981 107 ntBASIC-0.88□□□□□ -2.55
Trem3Q9JKE1 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.89□□□□□ -2.55
Trem3Q9JKE1 Gm23779-201ENSMUST00000157938 64 ntBASIC-0.89□□□□□ -2.55
Trem3Q9JKE1 Gm24129-201ENSMUST00000158537 97 ntBASIC-0.89□□□□□ -2.55
Trem3Q9JKE1 Gm25937-201ENSMUST00000083912 107 ntBASIC-0.89□□□□□ -2.55
Trem3Q9JKE1 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.9□□□□□ -2.55
Trem3Q9JKE1 Gm14307-201ENSMUST00000118930 291 ntBASIC-0.9□□□□□ -2.55
Trem3Q9JKE1 Gm14297-201ENSMUST00000129110 291 ntBASIC-0.9□□□□□ -2.55
Trem3Q9JKE1 Gm16362-201ENSMUST00000135189 214 ntBASIC-0.9□□□□□ -2.55
Trem3Q9JKE1 Gm25827-201ENSMUST00000157089 107 ntBASIC-0.9□□□□□ -2.55
Trem3Q9JKE1 Gm25424-201ENSMUST00000157612 58 ntBASIC-0.9□□□□□ -2.55
Trem3Q9JKE1 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.9□□□□□ -2.55
Trem3Q9JKE1 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.9□□□□□ -2.55
Trem3Q9JKE1 Gm27539-201ENSMUST00000184971 224 ntBASIC-0.9□□□□□ -2.55
Trem3Q9JKE1 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.9□□□□□ -2.55
Trem3Q9JKE1 AC131720.2-201ENSMUST00000220420 431 ntBASIC-0.9□□□□□ -2.55
Trem3Q9JKE1 n-R5s94-201ENSMUST00000082573 119 ntBASIC-0.9□□□□□ -2.55
Trem3Q9JKE1 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC-0.9□□□□□ -2.55
Trem3Q9JKE1 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.91□□□□□ -2.56
Trem3Q9JKE1 Gm44989-201ENSMUST00000204749 217 ntBASIC-0.91□□□□□ -2.56
Trem3Q9JKE1 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.91□□□□□ -2.56
Trem3Q9JKE1 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.92□□□□□ -2.56
Trem3Q9JKE1 Gm14906-201ENSMUST00000119265 390 ntBASIC-0.92□□□□□ -2.56
Trem3Q9JKE1 Gm26402-201ENSMUST00000158499 113 ntBASIC-0.92□□□□□ -2.56
Trem3Q9JKE1 Gm23793-201ENSMUST00000179396 117 ntBASIC-0.92□□□□□ -2.56
Trem3Q9JKE1 Gm44338-201ENSMUST00000198614 110 ntBASIC-0.92□□□□□ -2.56
Trem3Q9JKE1 Trav5-2-201ENSMUST00000199855 280 ntBASIC-0.92□□□□□ -2.56
Trem3Q9JKE1 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.92□□□□□ -2.56
Trem3Q9JKE1 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.92□□□□□ -2.56
Trem3Q9JKE1 AC125374.2-201ENSMUST00000214278 162 ntBASIC-0.92□□□□□ -2.56
Trem3Q9JKE1 Snora62-201ENSMUST00000082991 149 ntBASIC-0.92□□□□□ -2.56
Trem3Q9JKE1 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.92□□□□□ -2.56
Trem3Q9JKE1 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.93□□□□□ -2.56
Trem3Q9JKE1 Gm25982-201ENSMUST00000157920 101 ntBASIC-0.93□□□□□ -2.56
Trem3Q9JKE1 Gm22118-201ENSMUST00000175593 171 ntBASIC-0.93□□□□□ -2.56
Trem3Q9JKE1 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.93□□□□□ -2.56
Trem3Q9JKE1 Gm27755-201ENSMUST00000184623 132 ntBASIC-0.93□□□□□ -2.56
Trem3Q9JKE1 Gm37313-201ENSMUST00000191673 290 ntBASIC-0.93□□□□□ -2.56
Trem3Q9JKE1 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-0.93□□□□□ -2.56
Trem3Q9JKE1 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC-0.94□□□□□ -2.56
Trem3Q9JKE1 Gm26293-201ENSMUST00000104170 84 ntBASIC-0.94□□□□□ -2.56
Trem3Q9JKE1 Gm42606-201ENSMUST00000114209 239 ntBASIC-0.94□□□□□ -2.56
Trem3Q9JKE1 Gm22984-201ENSMUST00000122751 122 ntBASIC-0.94□□□□□ -2.56
Trem3Q9JKE1 Gm23466-201ENSMUST00000157133 106 ntBASIC-0.94□□□□□ -2.56
Trem3Q9JKE1 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.94□□□□□ -2.56
Trem3Q9JKE1 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.94□□□□□ -2.56
Trem3Q9JKE1 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.94□□□□□ -2.56
Trem3Q9JKE1 Mir6905-201ENSMUST00000184228 70 ntBASIC-0.94□□□□□ -2.56
Trem3Q9JKE1 Gm27997-201ENSMUST00000184942 69 ntBASIC-0.94□□□□□ -2.56
Trem3Q9JKE1 Gm44563-201ENSMUST00000207958 178 ntBASIC-0.94□□□□□ -2.56
Trem3Q9JKE1 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.95□□□□□ -2.56
Trem3Q9JKE1 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.95□□□□□ -2.56
Trem3Q9JKE1 Gm22051-201ENSMUST00000117002 127 ntBASIC-0.95□□□□□ -2.56
Trem3Q9JKE1 Gm13797-201ENSMUST00000121792 120 ntBASIC-0.95□□□□□ -2.56
Trem3Q9JKE1 Gm26479-201ENSMUST00000122620 106 ntBASIC-0.95□□□□□ -2.56
Trem3Q9JKE1 Gm22433-201ENSMUST00000158550 142 ntBASIC-0.95□□□□□ -2.56
Trem3Q9JKE1 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.95□□□□□ -2.56
Trem3Q9JKE1 Gm42594-201ENSMUST00000199511 246 ntBASIC-0.95□□□□□ -2.56
Trem3Q9JKE1 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC-0.95□□□□□ -2.56
Trem3Q9JKE1 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.95□□□□□ -2.56
Trem3Q9JKE1 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.95□□□□□ -2.56
Trem3Q9JKE1 Gm25634-201ENSMUST00000082667 105 ntBASIC-0.95□□□□□ -2.56
Trem3Q9JKE1 Gm14567-201ENSMUST00000117155 174 ntBASIC-0.96□□□□□ -2.56
Trem3Q9JKE1 Gm25769-201ENSMUST00000158569 127 ntBASIC-0.96□□□□□ -2.56
Trem3Q9JKE1 Gm38050-201ENSMUST00000191904 238 ntBASIC-0.96□□□□□ -2.56
Trem3Q9JKE1 Gm44419-201ENSMUST00000203338 229 ntBASIC-0.96□□□□□ -2.56
Trem3Q9JKE1 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.96□□□□□ -2.56
Trem3Q9JKE1 CT025526.1-201ENSMUST00000217327 267 ntBASIC-0.96□□□□□ -2.56
Trem3Q9JKE1 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.96□□□□□ -2.56
Trem3Q9JKE1 Gm23412-201ENSMUST00000083017 107 ntBASIC-0.96□□□□□ -2.56
Trem3Q9JKE1 Mir141-201ENSMUST00000083540 72 ntBASIC-0.96□□□□□ -2.56
Trem3Q9JKE1 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
Trem3Q9JKE1 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.97□□□□□ -2.56
Trem3Q9JKE1 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.97□□□□□ -2.56
Trem3Q9JKE1 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.97□□□□□ -2.56
Trem3Q9JKE1 mt-Tc-201ENSMUST00000082400 66 ntBASIC-0.97□□□□□ -2.56
Trem3Q9JKE1 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.97□□□□□ -2.56
Trem3Q9JKE1 Gm22332-201ENSMUST00000158072 126 ntBASIC-0.98□□□□□ -2.57
Trem3Q9JKE1 Gm24501-201ENSMUST00000158452 62 ntBASIC-0.98□□□□□ -2.57
Trem3Q9JKE1 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Trem3Q9JKE1 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Trem3Q9JKE1 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Trem3Q9JKE1 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Trem3Q9JKE1 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Trem3Q9JKE1 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Trem3Q9JKE1 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Trem3Q9JKE1 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Trem3Q9JKE1 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Trem3Q9JKE1 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-0.98□□□□□ -2.57
Retrieved 100 of 76,532 protein–RNA pairs in 136.3 ms