Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm25670-201ENSMUST00000178423 107 ntBASIC-3.01□□□□□ -2.89
Smco4Q9JIS3 Gm26239-201ENSMUST00000178842 107 ntBASIC-3.01□□□□□ -2.89
Smco4Q9JIS3 Ighv15-1-201ENSMUST00000194450 276 ntBASIC-3.01□□□□□ -2.89
Smco4Q9JIS3 Gm24292-201ENSMUST00000082888 107 ntBASIC-3.01□□□□□ -2.89
Smco4Q9JIS3 Gm5002-201ENSMUST00000207145 223 ntBASIC-3.02□□□□□ -2.89
Smco4Q9JIS3 Gm11322-201ENSMUST00000118095 435 ntBASIC-3.03□□□□□ -2.89
Smco4Q9JIS3 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC-3.03□□□□□ -2.89
Smco4Q9JIS3 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-3.03□□□□□ -2.89
Smco4Q9JIS3 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC-3.03□□□□□ -2.89
Smco4Q9JIS3 Platr25-208ENSMUST00000222602 939 ntBASIC-3.03□□□□□ -2.89
Smco4Q9JIS3 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC-3.03□□□□□ -2.89
Smco4Q9JIS3 Gm22215-201ENSMUST00000157558 96 ntBASIC-3.04□□□□□ -2.9
Smco4Q9JIS3 Trav5-2-201ENSMUST00000199855 280 ntBASIC-3.04□□□□□ -2.9
Smco4Q9JIS3 Gm25799-201ENSMUST00000082643 107 ntBASIC-3.04□□□□□ -2.9
Smco4Q9JIS3 Gm23974-201ENSMUST00000083321 131 ntBASIC-3.04□□□□□ -2.9
Smco4Q9JIS3 Gm23041-201ENSMUST00000083868 106 ntBASIC-3.04□□□□□ -2.9
Smco4Q9JIS3 Gm24522-201ENSMUST00000083964 108 ntBASIC-3.04□□□□□ -2.9
Smco4Q9JIS3 Gm25317-201ENSMUST00000116824 129 ntBASIC-3.05□□□□□ -2.9
Smco4Q9JIS3 Gm23492-201ENSMUST00000116837 115 ntBASIC-3.05□□□□□ -2.9
Smco4Q9JIS3 Gm25656-201ENSMUST00000158466 66 ntBASIC-3.05□□□□□ -2.9
Smco4Q9JIS3 Gm43038-201ENSMUST00000202359 88 ntBASIC-3.05□□□□□ -2.9
Smco4Q9JIS3 Gm23242-201ENSMUST00000083055 107 ntBASIC-3.05□□□□□ -2.9
Smco4Q9JIS3 Gm25313-201ENSMUST00000101817 116 ntBASIC-3.06□□□□□ -2.9
Smco4Q9JIS3 Mir1298-201ENSMUST00000116681 98 ntBASIC-3.06□□□□□ -2.9
Smco4Q9JIS3 Gm22720-201ENSMUST00000122710 87 ntBASIC-3.06□□□□□ -2.9
Smco4Q9JIS3 Gm23316-201ENSMUST00000157997 114 ntBASIC-3.06□□□□□ -2.9
Smco4Q9JIS3 Gm25712-201ENSMUST00000158634 93 ntBASIC-3.06□□□□□ -2.9
Smco4Q9JIS3 Gm23287-201ENSMUST00000179427 116 ntBASIC-3.06□□□□□ -2.9
Smco4Q9JIS3 Gm23143-201ENSMUST00000180137 116 ntBASIC-3.06□□□□□ -2.9
Smco4Q9JIS3 Gm24871-201ENSMUST00000083099 116 ntBASIC-3.06□□□□□ -2.9
Smco4Q9JIS3 Rnu5g-201ENSMUST00000093721 116 ntBASIC-3.06□□□□□ -2.9
Smco4Q9JIS3 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-3.06□□□□□ -2.9
Smco4Q9JIS3 Gm24580-201ENSMUST00000103965 131 ntBASIC-3.07□□□□□ -2.9
Smco4Q9JIS3 Gm11936-201ENSMUST00000118323 160 ntBASIC-3.07□□□□□ -2.9
Smco4Q9JIS3 Gm11388-201ENSMUST00000120908 159 ntBASIC-3.07□□□□□ -2.9
Smco4Q9JIS3 Gm24223-201ENSMUST00000158827 90 ntBASIC-3.07□□□□□ -2.9
Smco4Q9JIS3 Gm25275-201ENSMUST00000104297 129 ntBASIC-3.08□□□□□ -2.9
Smco4Q9JIS3 Gm22543-201ENSMUST00000104347 94 ntBASIC-3.08□□□□□ -2.9
Smco4Q9JIS3 Gm23661-201ENSMUST00000122630 87 ntBASIC-3.08□□□□□ -2.9
Smco4Q9JIS3 Gm23981-201ENSMUST00000157136 106 ntBASIC-3.08□□□□□ -2.9
Smco4Q9JIS3 Mir466m-201ENSMUST00000175052 84 ntBASIC-3.09□□□□□ -2.9
Smco4Q9JIS3 Gm23655-201ENSMUST00000122627 105 ntBASIC-3.1□□□□□ -2.91
Smco4Q9JIS3 Mir466n-201ENSMUST00000104798 94 ntBASIC-3.11□□□□□ -2.91
Smco4Q9JIS3 Gm23759-201ENSMUST00000158351 268 ntBASIC-3.11□□□□□ -2.91
Smco4Q9JIS3 Gm23630-201ENSMUST00000175292 104 ntBASIC-3.11□□□□□ -2.91
Smco4Q9JIS3 Gm23619-201ENSMUST00000178411 94 ntBASIC-3.11□□□□□ -2.91
Smco4Q9JIS3 Gm25474-201ENSMUST00000179052 94 ntBASIC-3.11□□□□□ -2.91
Smco4Q9JIS3 Gm22047-201ENSMUST00000179176 94 ntBASIC-3.11□□□□□ -2.91
Smco4Q9JIS3 Gm22446-201ENSMUST00000180108 104 ntBASIC-3.11□□□□□ -2.91
Smco4Q9JIS3 Gm23093-201ENSMUST00000083450 102 ntBASIC-3.11□□□□□ -2.91
Smco4Q9JIS3 Gm22113-201ENSMUST00000158343 104 ntBASIC-3.12□□□□□ -2.91
Smco4Q9JIS3 Mir6336-201ENSMUST00000183581 130 ntBASIC-3.12□□□□□ -2.91
Smco4Q9JIS3 AC158982.2-201ENSMUST00000226283 184 ntBASIC-3.12□□□□□ -2.91
Smco4Q9JIS3 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-3.13□□□□□ -2.91
Smco4Q9JIS3 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC-3.13□□□□□ -2.91
Smco4Q9JIS3 Gm38183-201ENSMUST00000193189 205 ntBASIC-3.13□□□□□ -2.91
Smco4Q9JIS3 Gm25629-201ENSMUST00000084001 107 ntBASIC-3.13□□□□□ -2.91
Smco4Q9JIS3 Gm27926-201ENSMUST00000157180 66 ntBASIC-3.14□□□□□ -2.91
Smco4Q9JIS3 Gm25056-201ENSMUST00000157372 62 ntBASIC-3.14□□□□□ -2.91
Smco4Q9JIS3 Gm22883-201ENSMUST00000157376 106 ntBASIC-3.14□□□□□ -2.91
Smco4Q9JIS3 Gm22612-201ENSMUST00000158293 101 ntBASIC-3.14□□□□□ -2.91
Smco4Q9JIS3 Mir218-1-201ENSMUST00000083669 110 ntBASIC-3.14□□□□□ -2.91
Smco4Q9JIS3 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-3.14□□□□□ -2.91
Smco4Q9JIS3 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC-3.15□□□□□ -2.91
Smco4Q9JIS3 Gm11834-201ENSMUST00000122257 585 ntBASIC-3.15□□□□□ -2.91
Smco4Q9JIS3 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-3.15□□□□□ -2.91
Smco4Q9JIS3 Gm23568-201ENSMUST00000177960 92 ntBASIC-3.16□□□□□ -2.92
Smco4Q9JIS3 Gm24829-201ENSMUST00000179245 92 ntBASIC-3.16□□□□□ -2.92
Smco4Q9JIS3 Mir136-201ENSMUST00000199494 62 ntBASIC-3.16□□□□□ -2.92
Smco4Q9JIS3 Gm22287-201ENSMUST00000083197 107 ntBASIC-3.16□□□□□ -2.92
Smco4Q9JIS3 Snord2-201ENSMUST00000157899 69 ntBASIC-3.17□□□□□ -2.92
Smco4Q9JIS3 Gm42773-201ENSMUST00000196962 148 ntBASIC-3.17□□□□□ -2.92
Smco4Q9JIS3 Gm26125-201ENSMUST00000083357 107 ntBASIC-3.17□□□□□ -2.92
Smco4Q9JIS3 CT009718.4-201ENSMUST00000221881 109 ntBASIC-3.19□□□□□ -2.92
Smco4Q9JIS3 Gm25434-201ENSMUST00000158278 167 ntBASIC-3.2□□□□□ -2.92
Smco4Q9JIS3 Gm22433-201ENSMUST00000158550 142 ntBASIC-3.2□□□□□ -2.92
Smco4Q9JIS3 Gm22851-201ENSMUST00000178741 94 ntBASIC-3.2□□□□□ -2.92
Smco4Q9JIS3 Gm25074-201ENSMUST00000178782 94 ntBASIC-3.2□□□□□ -2.92
Smco4Q9JIS3 Gm28917-201ENSMUST00000187294 237 ntBASIC-3.2□□□□□ -2.92
Smco4Q9JIS3 AC168880.2-201ENSMUST00000224488 201 ntBASIC-3.2□□□□□ -2.92
Smco4Q9JIS3 Gm25930-201ENSMUST00000082785 107 ntBASIC-3.2□□□□□ -2.92
Smco4Q9JIS3 Gm25207-201ENSMUST00000093745 107 ntBASIC-3.2□□□□□ -2.92
Smco4Q9JIS3 Gm12785-201ENSMUST00000122052 172 ntBASIC-3.21□□□□□ -2.92
Smco4Q9JIS3 Gm25781-201ENSMUST00000122527 84 ntBASIC-3.21□□□□□ -2.92
Smco4Q9JIS3 Gm26438-201ENSMUST00000082593 107 ntBASIC-3.21□□□□□ -2.92
Smco4Q9JIS3 Snord16a-201ENSMUST00000083895 99 ntBASIC-3.21□□□□□ -2.92
Smco4Q9JIS3 Mir465b-1-201ENSMUST00000103940 79 ntBASIC-3.22□□□□□ -2.92
Smco4Q9JIS3 Mir465b-2-201ENSMUST00000104662 79 ntBASIC-3.22□□□□□ -2.92
Smco4Q9JIS3 Gm14301-201ENSMUST00000120181 324 ntBASIC-3.22□□□□□ -2.92
Smco4Q9JIS3 Gm24635-201ENSMUST00000122712 128 ntBASIC-3.22□□□□□ -2.92
Smco4Q9JIS3 Gm24487-201ENSMUST00000178017 63 ntBASIC-3.22□□□□□ -2.92
Smco4Q9JIS3 AC112972.1-201ENSMUST00000227329 365 ntBASIC-3.22□□□□□ -2.92
Smco4Q9JIS3 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-3.22□□□□□ -2.92
Smco4Q9JIS3 Gm26454-201ENSMUST00000082682 107 ntBASIC-3.22□□□□□ -2.92
Smco4Q9JIS3 Gm22805-201ENSMUST00000082739 107 ntBASIC-3.22□□□□□ -2.92
Smco4Q9JIS3 Gm14307-201ENSMUST00000118930 291 ntBASIC-3.23□□□□□ -2.93
Smco4Q9JIS3 Gm14297-201ENSMUST00000129110 291 ntBASIC-3.23□□□□□ -2.93
Smco4Q9JIS3 Gm24847-201ENSMUST00000158032 108 ntBASIC-3.23□□□□□ -2.93
Smco4Q9JIS3 Gm44589-201ENSMUST00000207025 115 ntBASIC-3.23□□□□□ -2.93
Smco4Q9JIS3 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC-3.23□□□□□ -2.93
Retrieved 100 of 76,532 protein–RNA pairs in 189 ms