Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.13□□□□□ -2.43
Lima1Q9ERG0 Snord100-201ENSMUST00000116836 74 ntBASIC-0.14□□□□□ -2.43
Lima1Q9ERG0 Gm27747-201ENSMUST00000184707 85 ntBASIC-0.14□□□□□ -2.43
Lima1Q9ERG0 Gm42795-201ENSMUST00000198847 76 ntBASIC-0.14□□□□□ -2.43
Lima1Q9ERG0 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC-0.14□□□□□ -2.43
Lima1Q9ERG0 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.14□□□□□ -2.43
Lima1Q9ERG0 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.14□□□□□ -2.43
Lima1Q9ERG0 Gm24929-201ENSMUST00000083403 139 ntBASIC-0.14□□□□□ -2.43
Lima1Q9ERG0 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.15□□□□□ -2.43
Lima1Q9ERG0 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-0.15□□□□□ -2.43
Lima1Q9ERG0 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.15□□□□□ -2.43
Lima1Q9ERG0 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.15□□□□□ -2.43
Lima1Q9ERG0 Gm23020-201ENSMUST00000158766 253 ntBASIC-0.15□□□□□ -2.43
Lima1Q9ERG0 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.15□□□□□ -2.43
Lima1Q9ERG0 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.15□□□□□ -2.43
Lima1Q9ERG0 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.15□□□□□ -2.43
Lima1Q9ERG0 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.15□□□□□ -2.43
Lima1Q9ERG0 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
Lima1Q9ERG0 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.15□□□□□ -2.43
Lima1Q9ERG0 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.15□□□□□ -2.43
Lima1Q9ERG0 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.15□□□□□ -2.43
Lima1Q9ERG0 Gm24867-201ENSMUST00000104161 107 ntBASIC-0.16□□□□□ -2.44
Lima1Q9ERG0 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.16□□□□□ -2.44
Lima1Q9ERG0 Gm22242-201ENSMUST00000175224 118 ntBASIC-0.16□□□□□ -2.44
Lima1Q9ERG0 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.16□□□□□ -2.44
Lima1Q9ERG0 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.16□□□□□ -2.44
Lima1Q9ERG0 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.16□□□□□ -2.44
Lima1Q9ERG0 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.16□□□□□ -2.44
Lima1Q9ERG0 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.16□□□□□ -2.44
Lima1Q9ERG0 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.16□□□□□ -2.44
Lima1Q9ERG0 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.16□□□□□ -2.44
Lima1Q9ERG0 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.16□□□□□ -2.44
Lima1Q9ERG0 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.16□□□□□ -2.44
Lima1Q9ERG0 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.16□□□□□ -2.44
Lima1Q9ERG0 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.16□□□□□ -2.44
Lima1Q9ERG0 Snord85-201ENSMUST00000083262 73 ntBASIC-0.16□□□□□ -2.44
Lima1Q9ERG0 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
Lima1Q9ERG0 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.17□□□□□ -2.44
Lima1Q9ERG0 Mir875-201ENSMUST00000104698 78 ntBASIC-0.17□□□□□ -2.44
Lima1Q9ERG0 Gm23214-201ENSMUST00000122716 157 ntBASIC-0.17□□□□□ -2.44
Lima1Q9ERG0 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.17□□□□□ -2.44
Lima1Q9ERG0 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.17□□□□□ -2.44
Lima1Q9ERG0 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.17□□□□□ -2.44
Lima1Q9ERG0 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.17□□□□□ -2.44
Lima1Q9ERG0 Mir191-201ENSMUST00000196210 74 ntBASIC-0.17□□□□□ -2.44
Lima1Q9ERG0 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.17□□□□□ -2.44
Lima1Q9ERG0 AC154213.2-201ENSMUST00000227138 187 ntBASIC-0.17□□□□□ -2.44
Lima1Q9ERG0 Mir218-1-201ENSMUST00000083669 110 ntBASIC-0.17□□□□□ -2.44
Lima1Q9ERG0 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.18□□□□□ -2.44
Lima1Q9ERG0 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.18□□□□□ -2.44
Lima1Q9ERG0 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.18□□□□□ -2.44
Lima1Q9ERG0 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-0.18□□□□□ -2.44
Lima1Q9ERG0 Gm27585-201ENSMUST00000183717 199 ntBASIC-0.18□□□□□ -2.44
Lima1Q9ERG0 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.18□□□□□ -2.44
Lima1Q9ERG0 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.18□□□□□ -2.44
Lima1Q9ERG0 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.18□□□□□ -2.44
Lima1Q9ERG0 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.18□□□□□ -2.44
Lima1Q9ERG0 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.18□□□□□ -2.44
Lima1Q9ERG0 Mir18-201ENSMUST00000083469 96 ntBASIC-0.18□□□□□ -2.44
Lima1Q9ERG0 Mir141-201ENSMUST00000083540 72 ntBASIC-0.18□□□□□ -2.44
Lima1Q9ERG0 Gm11388-201ENSMUST00000120908 159 ntBASIC-0.19□□□□□ -2.44
Lima1Q9ERG0 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.19□□□□□ -2.44
Lima1Q9ERG0 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.19□□□□□ -2.44
Lima1Q9ERG0 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.19□□□□□ -2.44
Lima1Q9ERG0 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-0.19□□□□□ -2.44
Lima1Q9ERG0 Gm24765-201ENSMUST00000083691 103 ntBASIC-0.19□□□□□ -2.44
Lima1Q9ERG0 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.2□□□□□ -2.44
Lima1Q9ERG0 Gm25769-201ENSMUST00000158569 127 ntBASIC-0.2□□□□□ -2.44
Lima1Q9ERG0 Gm26160-201ENSMUST00000158965 63 ntBASIC-0.2□□□□□ -2.44
Lima1Q9ERG0 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.2□□□□□ -2.44
Lima1Q9ERG0 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.2□□□□□ -2.44
Lima1Q9ERG0 Mir6336-201ENSMUST00000183581 130 ntBASIC-0.2□□□□□ -2.44
Lima1Q9ERG0 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.2□□□□□ -2.44
Lima1Q9ERG0 Ighv12-2-201ENSMUST00000191949 362 ntBASIC-0.2□□□□□ -2.44
Lima1Q9ERG0 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.2□□□□□ -2.44
Lima1Q9ERG0 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.2□□□□□ -2.44
Lima1Q9ERG0 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.2□□□□□ -2.44
Lima1Q9ERG0 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.21□□□□□ -2.44
Lima1Q9ERG0 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.21□□□□□ -2.44
Lima1Q9ERG0 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.21□□□□□ -2.44
Lima1Q9ERG0 Gm12686-201ENSMUST00000120546 397 ntBASIC-0.21□□□□□ -2.44
Lima1Q9ERG0 Gm25364-201ENSMUST00000158851 107 ntBASIC-0.21□□□□□ -2.44
Lima1Q9ERG0 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.21□□□□□ -2.44
Lima1Q9ERG0 Gm23567-201ENSMUST00000178005 107 ntBASIC-0.21□□□□□ -2.44
Lima1Q9ERG0 Mir214-201ENSMUST00000083582 110 ntBASIC-0.21□□□□□ -2.44
Lima1Q9ERG0 Mir146-201ENSMUST00000083667 65 ntBASIC-0.21□□□□□ -2.44
Lima1Q9ERG0 Gm24764-201ENSMUST00000083686 199 ntBASIC-0.21□□□□□ -2.44
Lima1Q9ERG0 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.21□□□□□ -2.44
Lima1Q9ERG0 Gm25512-201ENSMUST00000083863 107 ntBASIC-0.21□□□□□ -2.44
Lima1Q9ERG0 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-0.21□□□□□ -2.44
Lima1Q9ERG0 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.22□□□□□ -2.44
Lima1Q9ERG0 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.22□□□□□ -2.44
Lima1Q9ERG0 Gm25267-201ENSMUST00000158522 63 ntBASIC-0.22□□□□□ -2.44
Lima1Q9ERG0 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.22□□□□□ -2.44
Lima1Q9ERG0 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.22□□□□□ -2.44
Lima1Q9ERG0 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
Lima1Q9ERG0 Gm26420-201ENSMUST00000104273 103 ntBASIC-0.23□□□□□ -2.45
Lima1Q9ERG0 Gm25111-201ENSMUST00000116686 147 ntBASIC-0.23□□□□□ -2.45
Lima1Q9ERG0 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.23□□□□□ -2.45
Lima1Q9ERG0 Gm11322-201ENSMUST00000118095 435 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 221.3 ms