Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm24276-201ENSMUST00000102181 110 ntBASIC0.48□□□□□ -2.33
Scn4aQ9ER60 Gm22337-201ENSMUST00000157721 132 ntBASIC0.48□□□□□ -2.33
Scn4aQ9ER60 Gm22983-201ENSMUST00000158308 104 ntBASIC0.48□□□□□ -2.33
Scn4aQ9ER60 Gm25749-201ENSMUST00000175485 111 ntBASIC0.48□□□□□ -2.33
Scn4aQ9ER60 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.48□□□□□ -2.33
Scn4aQ9ER60 Gm15289-201ENSMUST00000117793 244 ntBASIC0.47□□□□□ -2.33
Scn4aQ9ER60 Gm25424-201ENSMUST00000157612 58 ntBASIC0.47□□□□□ -2.33
Scn4aQ9ER60 Gm26482-201ENSMUST00000158015 62 ntBASIC0.47□□□□□ -2.33
Scn4aQ9ER60 Mir7010-201ENSMUST00000183464 63 ntBASIC0.47□□□□□ -2.33
Scn4aQ9ER60 Mir6336-201ENSMUST00000183581 130 ntBASIC0.47□□□□□ -2.33
Scn4aQ9ER60 Mir384-201ENSMUST00000083565 88 ntBASIC0.47□□□□□ -2.33
Scn4aQ9ER60 Gm13345-201ENSMUST00000121928 228 ntBASIC0.46□□□□□ -2.34
Scn4aQ9ER60 Gm25771-201ENSMUST00000158565 144 ntBASIC0.46□□□□□ -2.34
Scn4aQ9ER60 Gm26116-201ENSMUST00000175600 77 ntBASIC0.46□□□□□ -2.34
Scn4aQ9ER60 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Scn4aQ9ER60 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.46□□□□□ -2.34
Scn4aQ9ER60 Gm24929-201ENSMUST00000083403 139 ntBASIC0.46□□□□□ -2.34
Scn4aQ9ER60 Snord33-201ENSMUST00000083694 84 ntBASIC0.46□□□□□ -2.34
Scn4aQ9ER60 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.46□□□□□ -2.34
Scn4aQ9ER60 Gm22999-201ENSMUST00000157082 88 ntBASIC0.45□□□□□ -2.34
Scn4aQ9ER60 Gm44409-201ENSMUST00000198810 166 ntBASIC0.45□□□□□ -2.34
Scn4aQ9ER60 Gm14001-201ENSMUST00000118847 247 ntBASIC0.45□□□□□ -2.34
Scn4aQ9ER60 Gm15654-201ENSMUST00000152660 300 ntBASIC0.45□□□□□ -2.34
Scn4aQ9ER60 Gm26152-201ENSMUST00000157427 101 ntBASIC0.45□□□□□ -2.34
Scn4aQ9ER60 Gm24549-201ENSMUST00000158647 139 ntBASIC0.45□□□□□ -2.34
Scn4aQ9ER60 Gm26160-201ENSMUST00000158965 63 ntBASIC0.45□□□□□ -2.34
Scn4aQ9ER60 Gm10172-201ENSMUST00000085929 558 ntBASIC0.45□□□□□ -2.34
Scn4aQ9ER60 Gm22522-201ENSMUST00000158271 151 ntBASIC0.44□□□□□ -2.34
Scn4aQ9ER60 Gm24761-201ENSMUST00000179589 127 ntBASIC0.44□□□□□ -2.34
Scn4aQ9ER60 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.44□□□□□ -2.34
Scn4aQ9ER60 Gm25720-201ENSMUST00000157503 105 ntBASIC0.43□□□□□ -2.34
Scn4aQ9ER60 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.43□□□□□ -2.34
Scn4aQ9ER60 Mir146-201ENSMUST00000083667 65 ntBASIC0.43□□□□□ -2.34
Scn4aQ9ER60 Gm24278-201ENSMUST00000104239 127 ntBASIC0.43□□□□□ -2.34
Scn4aQ9ER60 Gm23892-201ENSMUST00000158105 130 ntBASIC0.43□□□□□ -2.34
Scn4aQ9ER60 Snora15-201ENSMUST00000177461 131 ntBASIC0.43□□□□□ -2.34
Scn4aQ9ER60 Gm25802-201ENSMUST00000082639 77 ntBASIC0.43□□□□□ -2.34
Scn4aQ9ER60 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.42□□□□□ -2.34
Scn4aQ9ER60 Gm26360-201ENSMUST00000158872 103 ntBASIC0.42□□□□□ -2.34
Scn4aQ9ER60 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.42□□□□□ -2.34
Scn4aQ9ER60 Gm22759-201ENSMUST00000102276 96 ntBASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Gm14946-201ENSMUST00000119859 296 ntBASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Gm23002-201ENSMUST00000179221 107 ntBASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Mir489-201ENSMUST00000093599 107 ntBASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Gm6897-201ENSMUST00000117714 138 ntBASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Gm14758-201ENSMUST00000119104 138 ntBASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Gm24729-201ENSMUST00000158225 137 ntBASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Gm25464-201ENSMUST00000175481 107 ntBASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Scn4aQ9ER60 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
Scn4aQ9ER60 Gm14884-201ENSMUST00000120456 196 ntBASIC0.4□□□□□ -2.35
Scn4aQ9ER60 Gm22962-201ENSMUST00000157962 73 ntBASIC0.4□□□□□ -2.35
Scn4aQ9ER60 Gm23838-201ENSMUST00000158067 162 ntBASIC0.4□□□□□ -2.35
Scn4aQ9ER60 Gm22612-201ENSMUST00000158293 101 ntBASIC0.4□□□□□ -2.35
Scn4aQ9ER60 Gm22476-201ENSMUST00000158902 100 ntBASIC0.4□□□□□ -2.35
Scn4aQ9ER60 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.4□□□□□ -2.35
Scn4aQ9ER60 Gm26293-201ENSMUST00000104170 84 ntBASIC0.39□□□□□ -2.35
Scn4aQ9ER60 Gm3702-201ENSMUST00000211754 346 ntBASIC0.39□□□□□ -2.35
Scn4aQ9ER60 Gm19572-201ENSMUST00000214326 338 ntBASIC0.39□□□□□ -2.35
Scn4aQ9ER60 Gm25393-201ENSMUST00000157336 285 ntBASIC0.38□□□□□ -2.35
Scn4aQ9ER60 Gm44909-201ENSMUST00000208756 165 ntBASIC0.38□□□□□ -2.35
Scn4aQ9ER60 Gm25814-201ENSMUST00000082754 107 ntBASIC0.38□□□□□ -2.35
Scn4aQ9ER60 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
Scn4aQ9ER60 Mir709-201ENSMUST00000102190 88 ntBASIC0.38□□□□□ -2.35
Scn4aQ9ER60 Gm12815-201ENSMUST00000121737 135 ntBASIC0.38□□□□□ -2.35
Scn4aQ9ER60 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.38□□□□□ -2.35
Scn4aQ9ER60 Gm27993-201ENSMUST00000184362 85 ntBASIC0.38□□□□□ -2.35
Scn4aQ9ER60 Gm37330-201ENSMUST00000192606 153 ntBASIC0.38□□□□□ -2.35
Scn4aQ9ER60 Gm26026-201ENSMUST00000122726 123 ntBASIC0.37□□□□□ -2.35
Scn4aQ9ER60 Gm22466-201ENSMUST00000175278 69 ntBASIC0.37□□□□□ -2.35
Scn4aQ9ER60 Mir7657-201ENSMUST00000196051 57 ntBASIC0.37□□□□□ -2.35
Scn4aQ9ER60 Gm16186-201ENSMUST00000120132 216 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm22145-201ENSMUST00000157396 148 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm25494-201ENSMUST00000158143 100 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm22433-201ENSMUST00000158550 142 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm45471-201ENSMUST00000211270 281 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 AC122320.1-201ENSMUST00000227233 105 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm25588-201ENSMUST00000082501 140 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm26076-201ENSMUST00000104065 105 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm14567-201ENSMUST00000117155 174 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm44807-201ENSMUST00000206115 154 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm26168-201ENSMUST00000083787 112 ntBASIC0.36□□□□□ -2.35
Scn4aQ9ER60 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.35□□□□□ -2.35
Scn4aQ9ER60 Gm24225-201ENSMUST00000158825 98 ntBASIC0.35□□□□□ -2.35
Scn4aQ9ER60 Mir100-201ENSMUST00000175270 80 ntBASIC0.35□□□□□ -2.35
Scn4aQ9ER60 Gm27289-201ENSMUST00000183341 82 ntBASIC0.35□□□□□ -2.35
Scn4aQ9ER60 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.35□□□□□ -2.35
Scn4aQ9ER60 Gm23301-201ENSMUST00000082713 65 ntBASIC0.35□□□□□ -2.35
Scn4aQ9ER60 Gm22753-201ENSMUST00000083657 107 ntBASIC0.35□□□□□ -2.35
Scn4aQ9ER60 Gm24256-201ENSMUST00000083696 84 ntBASIC0.35□□□□□ -2.35
Scn4aQ9ER60 Gm25596-201ENSMUST00000178368 107 ntBASIC0.34□□□□□ -2.35
Scn4aQ9ER60 Mir30f-201ENSMUST00000196073 92 ntBASIC0.34□□□□□ -2.35
Scn4aQ9ER60 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.34□□□□□ -2.35
Scn4aQ9ER60 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.34□□□□□ -2.35
Scn4aQ9ER60 Gm25610-201ENSMUST00000104016 129 ntBASIC0.34□□□□□ -2.36
Scn4aQ9ER60 Snord82-201ENSMUST00000082889 70 ntBASIC0.34□□□□□ -2.36
Scn4aQ9ER60 n-R5s87-201ENSMUST00000122752 116 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 212.5 ms