Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm3724-201ENSMUST00000197957 349 ntBASIC2.42□□□□□ -2.02
Trim42Q9D2H5 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.42□□□□□ -2.02
Trim42Q9D2H5 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.42□□□□□ -2.02
Trim42Q9D2H5 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trim42Q9D2H5 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trim42Q9D2H5 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.41□□□□□ -2.02
Trim42Q9D2H5 Gm15654-201ENSMUST00000152660 300 ntBASIC2.41□□□□□ -2.02
Trim42Q9D2H5 Gm22554-201ENSMUST00000157798 147 ntBASIC2.41□□□□□ -2.02
Trim42Q9D2H5 Gm22732-201ENSMUST00000158093 121 ntBASIC2.41□□□□□ -2.02
Trim42Q9D2H5 Gm23548-201ENSMUST00000158963 106 ntBASIC2.41□□□□□ -2.02
Trim42Q9D2H5 Gm16550-201ENSMUST00000162550 126 ntBASIC2.41□□□□□ -2.02
Trim42Q9D2H5 Gm27419-201ENSMUST00000184576 109 ntBASIC2.41□□□□□ -2.02
Trim42Q9D2H5 Gm34314-201ENSMUST00000203622 367 ntBASIC2.41□□□□□ -2.02
Trim42Q9D2H5 Gm25402-201ENSMUST00000082966 131 ntBASIC2.41□□□□□ -2.02
Trim42Q9D2H5 Gm26494-201ENSMUST00000083154 143 ntBASIC2.41□□□□□ -2.02
Trim42Q9D2H5 Gm24493-201ENSMUST00000083805 143 ntBASIC2.41□□□□□ -2.02
Trim42Q9D2H5 Gm22154-201ENSMUST00000083844 131 ntBASIC2.41□□□□□ -2.02
Trim42Q9D2H5 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trim42Q9D2H5 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trim42Q9D2H5 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
Trim42Q9D2H5 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trim42Q9D2H5 Gm23747-201ENSMUST00000104228 131 ntBASIC2.4□□□□□ -2.03
Trim42Q9D2H5 Gm23128-201ENSMUST00000104257 132 ntBASIC2.4□□□□□ -2.03
Trim42Q9D2H5 Gm25066-201ENSMUST00000158145 123 ntBASIC2.4□□□□□ -2.03
Trim42Q9D2H5 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.4□□□□□ -2.03
Trim42Q9D2H5 Gm23128-202ENSMUST00000196578 133 ntBASIC2.4□□□□□ -2.03
Trim42Q9D2H5 Gm44393-201ENSMUST00000197418 138 ntBASIC2.4□□□□□ -2.03
Trim42Q9D2H5 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.4□□□□□ -2.03
Trim42Q9D2H5 Mir5117-201ENSMUST00000083226 84 ntBASIC2.4□□□□□ -2.03
Trim42Q9D2H5 Gm24384-201ENSMUST00000122693 75 ntBASIC2.39□□□□□ -2.03
Trim42Q9D2H5 Gm23391-201ENSMUST00000157579 104 ntBASIC2.39□□□□□ -2.03
Trim42Q9D2H5 Gm24958-201ENSMUST00000158009 97 ntBASIC2.39□□□□□ -2.03
Trim42Q9D2H5 Gm23375-201ENSMUST00000175407 83 ntBASIC2.39□□□□□ -2.03
Trim42Q9D2H5 Gm37557-201ENSMUST00000191640 139 ntBASIC2.39□□□□□ -2.03
Trim42Q9D2H5 Gm44462-201ENSMUST00000199696 129 ntBASIC2.39□□□□□ -2.03
Trim42Q9D2H5 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.39□□□□□ -2.03
Trim42Q9D2H5 Gm25635-201ENSMUST00000082675 131 ntBASIC2.39□□□□□ -2.03
Trim42Q9D2H5 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.39□□□□□ -2.03
Trim42Q9D2H5 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Trim42Q9D2H5 Gm25168-201ENSMUST00000104189 132 ntBASIC2.38□□□□□ -2.03
Trim42Q9D2H5 Gm14884-201ENSMUST00000120456 196 ntBASIC2.38□□□□□ -2.03
Trim42Q9D2H5 Gm24868-201ENSMUST00000157265 136 ntBASIC2.38□□□□□ -2.03
Trim42Q9D2H5 Gm26485-201ENSMUST00000158019 64 ntBASIC2.38□□□□□ -2.03
Trim42Q9D2H5 Gm24077-201ENSMUST00000158183 136 ntBASIC2.38□□□□□ -2.03
Trim42Q9D2H5 Gm26213-201ENSMUST00000158582 110 ntBASIC2.38□□□□□ -2.03
Trim42Q9D2H5 Mir6388-201ENSMUST00000184417 75 ntBASIC2.38□□□□□ -2.03
Trim42Q9D2H5 Gm26062-201ENSMUST00000083379 107 ntBASIC2.38□□□□□ -2.03
Trim42Q9D2H5 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
Trim42Q9D2H5 Gm44560-201ENSMUST00000207816 3115 ntBASIC2.37□□□□□ -2.03
Trim42Q9D2H5 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Trim42Q9D2H5 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trim42Q9D2H5 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trim42Q9D2H5 Gm11966-201ENSMUST00000119907 87 ntBASIC2.37□□□□□ -2.03
Trim42Q9D2H5 Gm3852-201ENSMUST00000182781 264 ntBASIC2.37□□□□□ -2.03
Trim42Q9D2H5 Gm27505-201ENSMUST00000185071 110 ntBASIC2.37□□□□□ -2.03
Trim42Q9D2H5 Gm25798-201ENSMUST00000082641 107 ntBASIC2.37□□□□□ -2.03
Trim42Q9D2H5 Mir300-201ENSMUST00000083485 79 ntBASIC2.37□□□□□ -2.03
Trim42Q9D2H5 Mir30d-201ENSMUST00000083503 82 ntBASIC2.37□□□□□ -2.03
Trim42Q9D2H5 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.37□□□□□ -2.03
Trim42Q9D2H5 Gm23469-201ENSMUST00000157131 104 ntBASIC2.36□□□□□ -2.03
Trim42Q9D2H5 Gm22083-201ENSMUST00000157586 102 ntBASIC2.36□□□□□ -2.03
Trim42Q9D2H5 Gm24210-201ENSMUST00000158263 133 ntBASIC2.36□□□□□ -2.03
Trim42Q9D2H5 Gm25011-201ENSMUST00000158398 126 ntBASIC2.36□□□□□ -2.03
Trim42Q9D2H5 Gm25160-201ENSMUST00000158914 102 ntBASIC2.36□□□□□ -2.03
Trim42Q9D2H5 Gm20477-201ENSMUST00000174028 280 ntBASIC2.36□□□□□ -2.03
Trim42Q9D2H5 Gm20391-201ENSMUST00000174722 106 ntBASIC2.36□□□□□ -2.03
Trim42Q9D2H5 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.36□□□□□ -2.03
Trim42Q9D2H5 Gm25528-201ENSMUST00000180264 132 ntBASIC2.36□□□□□ -2.03
Trim42Q9D2H5 Mir6993-201ENSMUST00000184912 65 ntBASIC2.36□□□□□ -2.03
Trim42Q9D2H5 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.36□□□□□ -2.03
Trim42Q9D2H5 Mir93-201ENSMUST00000083593 88 ntBASIC2.36□□□□□ -2.03
Trim42Q9D2H5 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.35□□□□□ -2.03
Trim42Q9D2H5 Mir20b-201ENSMUST00000102087 80 ntBASIC2.35□□□□□ -2.03
Trim42Q9D2H5 Gm22494-201ENSMUST00000104495 128 ntBASIC2.35□□□□□ -2.03
Trim42Q9D2H5 Gm26280-201ENSMUST00000157096 101 ntBASIC2.35□□□□□ -2.03
Trim42Q9D2H5 Gm25750-201ENSMUST00000175483 112 ntBASIC2.35□□□□□ -2.03
Trim42Q9D2H5 Mir6369-201ENSMUST00000183772 106 ntBASIC2.35□□□□□ -2.03
Trim42Q9D2H5 Gm24313-201ENSMUST00000082561 133 ntBASIC2.35□□□□□ -2.03
Trim42Q9D2H5 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.34□□□□□ -2.03
Trim42Q9D2H5 Mir3086-201ENSMUST00000175072 87 ntBASIC2.34□□□□□ -2.03
Trim42Q9D2H5 Gm28900-201ENSMUST00000185232 156 ntBASIC2.34□□□□□ -2.03
Trim42Q9D2H5 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.34□□□□□ -2.03
Trim42Q9D2H5 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.34□□□□□ -2.03
Trim42Q9D2H5 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.34□□□□□ -2.03
Trim42Q9D2H5 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.34□□□□□ -2.03
Trim42Q9D2H5 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.34□□□□□ -2.03
Trim42Q9D2H5 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2.34□□□□□ -2.03
Trim42Q9D2H5 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC2.34□□□□□ -2.03
Trim42Q9D2H5 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC2.34□□□□□ -2.03
Trim42Q9D2H5 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC2.34□□□□□ -2.03
Trim42Q9D2H5 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC2.34□□□□□ -2.03
Trim42Q9D2H5 Gm44966-201ENSMUST00000208096 157 ntBASIC2.34□□□□□ -2.03
Trim42Q9D2H5 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trim42Q9D2H5 Gm24399-201ENSMUST00000157869 74 ntBASIC2.33□□□□□ -2.04
Trim42Q9D2H5 Gm25014-201ENSMUST00000158401 103 ntBASIC2.33□□□□□ -2.04
Trim42Q9D2H5 Gm25044-201ENSMUST00000158603 104 ntBASIC2.33□□□□□ -2.04
Trim42Q9D2H5 Gm16561-201ENSMUST00000163001 192 ntBASIC2.33□□□□□ -2.04
Trim42Q9D2H5 Gm5900-201ENSMUST00000179862 375 ntBASIC2.33□□□□□ -2.04
Trim42Q9D2H5 Mir30f-201ENSMUST00000196073 92 ntBASIC2.33□□□□□ -2.04
Trim42Q9D2H5 Gm44526-201ENSMUST00000204664 121 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 176 ms