Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm26029-201ENSMUST00000158659 132 ntBASIC1.18□□□□□ -2.22
Ddx56Q9D0R4 Gm25069-201ENSMUST00000175238 86 ntBASIC1.18□□□□□ -2.22
Ddx56Q9D0R4 Gm23267-201ENSMUST00000178490 132 ntBASIC1.18□□□□□ -2.22
Ddx56Q9D0R4 Gm24020-201ENSMUST00000180156 108 ntBASIC1.18□□□□□ -2.22
Ddx56Q9D0R4 Gm42795-201ENSMUST00000198847 76 ntBASIC1.18□□□□□ -2.22
Ddx56Q9D0R4 DQ267101-201ENSMUST00000082562 73 ntBASIC1.18□□□□□ -2.22
Ddx56Q9D0R4 Gm26363-201ENSMUST00000158866 83 ntBASIC1.17□□□□□ -2.22
Ddx56Q9D0R4 Mir1933-201ENSMUST00000158930 88 ntBASIC1.17□□□□□ -2.22
Ddx56Q9D0R4 Gm17020-201ENSMUST00000172274 274 ntBASIC1.17□□□□□ -2.22
Ddx56Q9D0R4 Gm44807-201ENSMUST00000206115 154 ntBASIC1.17□□□□□ -2.22
Ddx56Q9D0R4 Gm22780-201ENSMUST00000104084 132 ntBASIC1.16□□□□□ -2.22
Ddx56Q9D0R4 Snord90-201ENSMUST00000104568 111 ntBASIC1.16□□□□□ -2.22
Ddx56Q9D0R4 Gm25968-201ENSMUST00000157167 100 ntBASIC1.16□□□□□ -2.22
Ddx56Q9D0R4 Gm27974-201ENSMUST00000183415 105 ntBASIC1.16□□□□□ -2.22
Ddx56Q9D0R4 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.15□□□□□ -2.22
Ddx56Q9D0R4 Gm24431-201ENSMUST00000104073 66 ntBASIC1.15□□□□□ -2.23
Ddx56Q9D0R4 Mir1904-201ENSMUST00000122702 80 ntBASIC1.15□□□□□ -2.23
Ddx56Q9D0R4 Gm23763-201ENSMUST00000158345 60 ntBASIC1.15□□□□□ -2.23
Ddx56Q9D0R4 Gm24054-201ENSMUST00000158619 105 ntBASIC1.15□□□□□ -2.23
Ddx56Q9D0R4 Gm20409-201ENSMUST00000173457 130 ntBASIC1.15□□□□□ -2.23
Ddx56Q9D0R4 Mir6381-201ENSMUST00000183426 87 ntBASIC1.15□□□□□ -2.23
Ddx56Q9D0R4 Gm27419-201ENSMUST00000184576 109 ntBASIC1.15□□□□□ -2.23
Ddx56Q9D0R4 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.15□□□□□ -2.23
Ddx56Q9D0R4 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1.15□□□□□ -2.23
Ddx56Q9D0R4 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.15□□□□□ -2.23
Ddx56Q9D0R4 Snord32a-201ENSMUST00000083285 83 ntBASIC1.15□□□□□ -2.23
Ddx56Q9D0R4 Mir30a-201ENSMUST00000083471 71 ntBASIC1.15□□□□□ -2.23
Ddx56Q9D0R4 Gm24252-201ENSMUST00000083700 132 ntBASIC1.15□□□□□ -2.23
Ddx56Q9D0R4 Mir532-201ENSMUST00000093630 96 ntBASIC1.15□□□□□ -2.23
Ddx56Q9D0R4 Mir343-201ENSMUST00000102360 75 ntBASIC1.14□□□□□ -2.23
Ddx56Q9D0R4 Gm25110-201ENSMUST00000116684 121 ntBASIC1.14□□□□□ -2.23
Ddx56Q9D0R4 Gm25775-201ENSMUST00000116716 121 ntBASIC1.14□□□□□ -2.23
Ddx56Q9D0R4 Gm24795-201ENSMUST00000116737 121 ntBASIC1.14□□□□□ -2.23
Ddx56Q9D0R4 Gm25171-201ENSMUST00000116926 121 ntBASIC1.14□□□□□ -2.23
Ddx56Q9D0R4 Gm23988-201ENSMUST00000117034 122 ntBASIC1.14□□□□□ -2.23
Ddx56Q9D0R4 Gm14039-201ENSMUST00000118705 101 ntBASIC1.14□□□□□ -2.23
Ddx56Q9D0R4 Gm14946-201ENSMUST00000119859 296 ntBASIC1.14□□□□□ -2.23
Ddx56Q9D0R4 Gm24728-201ENSMUST00000158226 125 ntBASIC1.14□□□□□ -2.23
Ddx56Q9D0R4 Gm27792-201ENSMUST00000184031 115 ntBASIC1.14□□□□□ -2.23
Ddx56Q9D0R4 Gm28767-201ENSMUST00000188601 114 ntBASIC1.14□□□□□ -2.23
Ddx56Q9D0R4 Gm14626-201ENSMUST00000117619 216 ntBASIC1.13□□□□□ -2.23
Ddx56Q9D0R4 Gm15654-201ENSMUST00000152660 300 ntBASIC1.13□□□□□ -2.23
Ddx56Q9D0R4 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Ddx56Q9D0R4 Gm43944-201ENSMUST00000205220 120 ntBASIC1.13□□□□□ -2.23
Ddx56Q9D0R4 Gm11644-201ENSMUST00000119735 150 ntBASIC1.12□□□□□ -2.23
Ddx56Q9D0R4 Gm25544-201ENSMUST00000122676 120 ntBASIC1.12□□□□□ -2.23
Ddx56Q9D0R4 Gm24777-201ENSMUST00000157644 107 ntBASIC1.12□□□□□ -2.23
Ddx56Q9D0R4 Gm23967-201ENSMUST00000175062 78 ntBASIC1.12□□□□□ -2.23
Ddx56Q9D0R4 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.12□□□□□ -2.23
Ddx56Q9D0R4 Gm25136-201ENSMUST00000083253 115 ntBASIC1.12□□□□□ -2.23
Ddx56Q9D0R4 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.12□□□□□ -2.23
Ddx56Q9D0R4 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.12□□□□□ -2.23
Ddx56Q9D0R4 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.11□□□□□ -2.23
Ddx56Q9D0R4 Gm24747-201ENSMUST00000157835 87 ntBASIC1.11□□□□□ -2.23
Ddx56Q9D0R4 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.11□□□□□ -2.23
Ddx56Q9D0R4 Gm23636-201ENSMUST00000175070 95 ntBASIC1.11□□□□□ -2.23
Ddx56Q9D0R4 Gm27699-201ENSMUST00000183553 180 ntBASIC1.11□□□□□ -2.23
Ddx56Q9D0R4 Gm23947-201ENSMUST00000093636 107 ntBASIC1.11□□□□□ -2.23
Ddx56Q9D0R4 Mir7657-201ENSMUST00000196051 57 ntBASIC1.1□□□□□ -2.23
Ddx56Q9D0R4 Mir30f-201ENSMUST00000196073 92 ntBASIC1.1□□□□□ -2.23
Ddx56Q9D0R4 Gm27326-201ENSMUST00000183504 95 ntBASIC1.09□□□□□ -2.23
Ddx56Q9D0R4 Mir6962-201ENSMUST00000199512 63 ntBASIC1.09□□□□□ -2.23
Ddx56Q9D0R4 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.09□□□□□ -2.23
Ddx56Q9D0R4 Gm23303-201ENSMUST00000082714 152 ntBASIC1.09□□□□□ -2.23
Ddx56Q9D0R4 Mir22-201ENSMUST00000083595 95 ntBASIC1.09□□□□□ -2.23
Ddx56Q9D0R4 Mir500-201ENSMUST00000093600 92 ntBASIC1.09□□□□□ -2.23
Ddx56Q9D0R4 Gm44489-201ENSMUST00000104619 97 ntBASIC1.08□□□□□ -2.24
Ddx56Q9D0R4 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Ddx56Q9D0R4 Gm23853-201ENSMUST00000158375 104 ntBASIC1.08□□□□□ -2.24
Ddx56Q9D0R4 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Ddx56Q9D0R4 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Ddx56Q9D0R4 AC150901.1-201ENSMUST00000208407 145 ntBASIC1.08□□□□□ -2.24
Ddx56Q9D0R4 Mir695-201ENSMUST00000102261 109 ntBASIC1.07□□□□□ -2.24
Ddx56Q9D0R4 Gm22466-201ENSMUST00000175278 69 ntBASIC1.07□□□□□ -2.24
Ddx56Q9D0R4 Mir6364-201ENSMUST00000183396 86 ntBASIC1.07□□□□□ -2.24
Ddx56Q9D0R4 Mir7665-201ENSMUST00000184907 63 ntBASIC1.07□□□□□ -2.24
Ddx56Q9D0R4 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.07□□□□□ -2.24
Ddx56Q9D0R4 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.07□□□□□ -2.24
Ddx56Q9D0R4 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.07□□□□□ -2.24
Ddx56Q9D0R4 Mir20b-201ENSMUST00000102087 80 ntBASIC1.05□□□□□ -2.24
Ddx56Q9D0R4 Gm6272-201ENSMUST00000121256 171 ntBASIC1.05□□□□□ -2.24
Ddx56Q9D0R4 Gm25444-201ENSMUST00000158999 113 ntBASIC1.05□□□□□ -2.24
Ddx56Q9D0R4 Gm22911-201ENSMUST00000177920 107 ntBASIC1.05□□□□□ -2.24
Ddx56Q9D0R4 Gm38274-201ENSMUST00000195689 148 ntBASIC1.05□□□□□ -2.24
Ddx56Q9D0R4 Gm18502-201ENSMUST00000218679 199 ntBASIC1.05□□□□□ -2.24
Ddx56Q9D0R4 Gm25814-201ENSMUST00000082754 107 ntBASIC1.05□□□□□ -2.24
Ddx56Q9D0R4 Mir362-201ENSMUST00000093592 65 ntBASIC1.05□□□□□ -2.24
Ddx56Q9D0R4 Gm26338-201ENSMUST00000102372 110 ntBASIC1.04□□□□□ -2.24
Ddx56Q9D0R4 Gm24549-201ENSMUST00000158647 139 ntBASIC1.04□□□□□ -2.24
Ddx56Q9D0R4 Mir3094-201ENSMUST00000175121 64 ntBASIC1.04□□□□□ -2.24
Ddx56Q9D0R4 Gm23509-201ENSMUST00000083080 160 ntBASIC1.04□□□□□ -2.24
Ddx56Q9D0R4 Gm10172-201ENSMUST00000085929 558 ntBASIC1.04□□□□□ -2.24
Ddx56Q9D0R4 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.04□□□□□ -2.24
Ddx56Q9D0R4 Mir6369-201ENSMUST00000183772 106 ntBASIC1.03□□□□□ -2.24
Ddx56Q9D0R4 Mir6390-201ENSMUST00000184405 129 ntBASIC1.03□□□□□ -2.24
Ddx56Q9D0R4 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.03□□□□□ -2.24
Ddx56Q9D0R4 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.03□□□□□ -2.24
Ddx56Q9D0R4 Gm25683-201ENSMUST00000083940 131 ntBASIC1.03□□□□□ -2.24
Ddx56Q9D0R4 Scarna9-201ENSMUST00000104318 70 ntBASIC1.02□□□□□ -2.25
Ddx56Q9D0R4 Gm23203-201ENSMUST00000104374 107 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 7.8 ms